Apodemus sylvaticus (European woodmouse): 127685411
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Entry
127685411 CDS
T10613
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
127685411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asyl04040
]
127685411
Ion channels [BR:
asyl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127685411
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FUT8_N_cat
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
127685411
NCBI-ProteinID:
XP_052038558
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All DBs
Position
5:45791911..45872670
Genome browser
AA seq
2007 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITTFFNNSL
DWNGTAFNRTMNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGT
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQAGEEEKEDAVRKSASEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFKGRVKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTSRQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRVQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSSIYKKDKGREDEGNAXIKEDIITDKLNENSTPEKTDVTPSTTSPPSYDSV
TKPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgcgatcgaacaacgcatcgcagaagagaaagctaagagacccaagcaggaa
cgcaaggacgaagacgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccttttatttatggagacattcctccagagatggtgtcagagcctctggaggac
ctggacccctactatatcaataagaaaacctttatagtattgaataaagggaaggccatc
tctcggttcagtgccacctctgccctgtacattttaactcccttcaaccccattagaaaa
ttagctattaagattttggtacactctttattcaatgtgcttatcatgtgcacaattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtat
acttttacaggaatttatacttttgaatcacttattaaaatacttgcaagaggcttttgt
ctagaagatttcacatttctacgggatccctggaactggctggatttcacagtcattacc
tttgcatatgtgacagagtttgtggacctgggcaatgtctcggcgttgagaacgttcaga
gttctccgagcattgaaaacaatatcagtcattccaggcctgaagaccattgtgggggcc
ctgatccagtcagtgaagaagctgtctgacgtcatgatcctcactgtgttctgtctcagc
gtatttgcactaattgggctgcagctcttcatgggcaacctgaggaataaatgcttgcag
tggcccccagacaattctacctttgaaataaatatcactaccttctttaataactcattg
gattggaatggtactgccttcaataggacaatgaacatgtttaactgggatgaatatatt
gaagataaaagtcacttttattttttggaaggacaaaatgatgctctgctttgtggcaac
agctcggatgctggccagtgtccagaaggatacatctgcgtgaaggctgggagaaacccc
aactatggctacacaagttttgacaccttcagctgggccttcttgtccttatttcgtctt
atgactcaagacttctgggaaaacctttatcaactgaccttgcgtgctgctgggaaaaca
tatatgatattttttgtgctcgtgattttcttgggctcattctacctaataaacttgatc
ctggctgtggtggctatggcctatgaggaacagaaccaggccactttggaggaggctgag
cagaaggaggcggagtttcagcagatgctggagcaacttaagaagcagcaggaggaagct
caggcagcagctgcagcagcgtctgcagaatccagagacttcagcggggcaggtgggaca
ggcgttttctcggagagttcttcagtagcgtccaagttaagttccaagagtgaaaaggag
ctgaaaaacagaagaaagaaaaagaaacagaaagagcaggctggagaggaagagaaggaa
gatgcagtgcggaaatctgcctctgaagacagcatacgaaagaaaggcttccggttttcc
ctagaaggaagtagactgacctatgagaagaggttttcctctccacaccagtctcttctg
agcatccgaggctcccttttttctccgaggcgcaacagcagagcaagtcttttcagcttc
aaaggtcgagtgaaggatattggctctgaaaatgactttgcagacgatgagcacagcacg
tttgaggacaacgacagcagaagagactctctgtttgtaccacacagacatggagagagg
cgtcccagcaacgtcagccaggccagccgtgcctcccggggaatacccactctacccatg
aatgggaagatgcacagtgctgtggactgcaacggtgtggtctccctagttggaggccct
tctgcactcacatctcctgtggggcagctactcccagagggcacaactactgaaacagaa
ataaggaagaggaggtctagttcttaccatgtttctatggacttgttggaagaccctaca
tcaaggcaaagagcaatgagtatggctagcattttgacaaacactatggaagaacttgaa
gaatccagacagaaatgccctccctgctggtataaatttgctaatatgtgcctaatttgg
gactgttgtaagccatggctaaaggtaaaacatgttgtcaacctggtagtgatggaccca
tttgtcgacctggccatcaccatctgcattgtgttaaatacactgttcatggctatggag
cactaccccatgactgagcagttcagcagtgtgctgtctgttgggaatttggtcttcact
gggatcttcacagcagaaatgtttctcaagataattgctatggatccatattattacttc
caagaaggctggaatatctttgatggtttcatagtgagccttagtttaatggaacttggc
ttggcgaatgtggaaggattgtcagttctccgatcattccgactgcttagagtcttcaag
ttggcaaaatcctggcccacattgaatatgctcattaagatcattggcaactcggtgggt
gcactgggcaacctgaccctggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctgtttggaaagagctacaaggagtgtgtctgcaagatttccaatgattgtgag
ctcccacgctggcacatgcacgacttcttccactccttcctgatcgtgtttcgtgtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgcgggccagaccatgtgt
cttactgtcttcatgatggtcatggtgattgggaaccttgtggttctgaacctcttcttg
gccttgctcctcagttctttcagctcagacaacctggcggccacagacgacgataacgaa
atgaacaacctccagatagctgtgggaaggatgcagaaggggattgattttgttaaaagg
aagatacgcgaattcattcagaaagcctttgtcagaaagcagaaagctttagatgaaatc
aaaccccttgaagatctgaataacaagaaagacagttgtatctccaaccacacgaccata
gaaatagggaaggacctcaattacctcaaagatggaaacgggacgaccagtggcataggc
agcagtgtagagaagtacgtggttgatgagagtgactacatgtcattcatcaacaacccc
agcctcactgtgactgtgcccattgccgtgggagagtccgactttgagaacttaaataca
gaagagttcagcagtgaatcagatatggaagaaagcaaggagaaattgaatgcaactagt
tcatctgagggaagcacagttgatataggagctccagcagagggagagcagccggaggct
gagccagaggagtccctggagccagaagcctgtttcacagaagactgtgtgagaaagttc
aagtgctgccagataagcatagaagagggcaaaggcaaactctggtggaacttgaggaaa
acatgctacaagatagtagagcacaactggtttgaaaccttcattgtcttcatgattctg
ctcagcagcggtgctctggcctttgaagacatttatatcgagcagcgaaagaccatcaag
accatgttggagtatgctgacaaggttttcacttacatcttcatcctggagatgcttcta
aagtgggttgcatatggtttccagatgtatttcaccaatgcctggtgctggctggacttt
ctgatcgttgatgtctccctggttagcttgactgcgaatgccttgggctattcagaactt
ggtgccatcaaatccctccgaacattaagagcactgaggccactccgagccttatcccga
tttgaaggaatgagggttgttgtaaacgctctcctaggcgccatcccatccattatgaac
gtacttctggtctgcctgatcttttggttaatattcagtatcatgggagtgaatctcttt
gctggcaagttctatcactgcatcaactacaccaccggggaaatgtttgacgtgagcgtg
gtcaacaactacagtgaatgccaagcactcatcgagagcaatcagacggccaggtggaaa
aatgtgaaagtcaacttcgacaacgtgggcctcggatacctttctctgcttcaagtagcc
acgtttaaaggatggatggatatcatgtatgcagccgttgactcaagaaatgtagaactg
caacccaaatatgaagacaatctatacatgtacctttactttgtcatctttattattttt
ggctcattcttcacactgaacctgttcatcggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactacaat
gcaatgaagaagctggggtccaagaaaccgcaaaaacccatacctcgtcccgctaacaaa
tttcaagggatggtctttgattttgtaactaaacaagtgtttgacatcagcatcatgatc
ctcatctgcctcaatatggtgaccatgatggtggaaacggacgaccagagtcaggagatg
accaacatcctgtactggatcaacctggtgttcattgtcctatttacaggagagtgtgtc
ctgaagctcatctccctccgctattattatttcaccattggatggaatatttttgatttt
gtggtggtcattctctccattgtaggaatgtttcttgctgagctgatagagaagtatttc
gtgtcccctaccctgttccgagtcatccgcctggccaggattggacgaatcctacgcctg
atcaaaggcgccaaggggatccgcactctgctctttgctctcatgatgtctcttcctgcg
ctgttcaacatcggcctcctgcttttcctggtcatgttcatctatgccatctttggcatg
tccaactttgcctacgtgaagagggaagttgggattgatgacatgttcaactttgagacc
ttcggcaacagcatgatctgcctgttccaaatcaccacctctgcgggctgggatggactg
ctggcccctatactaaatagcggacctcctgactgtgaccctgaaaaagatcaccctgga
agctcggtgaagggggactgtgggaacccatctgtggggattttcttttttgtcagctac
attatcatatccttcctggttgtggtgaacatgtacatcgctgtcatcctggagaacttc
agcgttgccacagaagaaagtgcagagcccctgagtgaggacgactttgagatgttctac
gaagtctgggagaagttcgaccctgacgccactcagttcatagagttctgcaagctctct
gactttgcagctgccctggatcctccccttctcatcgcaaagccaaacaaagtccagctc
atagccatggacctgcccatggtgagtggagaccgcatccactgcctggacatcttattt
gcttttacaaagcgggtcctgggtgagagtggagagatggacgcccttcgagtccagatg
gaagagcggttcatggcttccaacccctccaaggtctcttatgagcccattaccaccact
ctgaaacgcaaacaagaggaggtgtctgctattgtcatccagcgagcttataggcgctat
ctcctgaaacagaaagttaagaaggtttcatctatatataaaaaagacaagggtagagaa
gatgagggaaacgccnncatcaaagaagacatcatcacggataaactgaatgagaattca
actccagagaagactgatgtgacaccttccaccacttctccaccttcctacgatagcgtg
actaaaccggaaaaggaaaaatttgaaaaggacaaatcggaaaaagaggacaaggggaaa
gatatcagggaaagtaaaaagtaa
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integrated database retrieval system
