Acetobacter senegalensis: ASN_237
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Entry
ASN_237 CDS
T04217
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
asz
Acetobacter senegalensis
Pathway
asz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASN_237 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asz03021
]
ASN_237 (rpoB)
03400 DNA repair and recombination proteins [BR:
asz03400
]
ASN_237 (rpoB)
Enzymes [BR:
asz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASN_237 (rpoB)
Transcription machinery [BR:
asz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASN_237 (rpoB)
DNA repair and recombination proteins [BR:
asz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASN_237 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DOCK-C2
SPG4
Motif
Other DBs
NCBI-ProteinID:
CEF39680
UniProt:
A0A0U5ESF2
LinkDB
All DBs
Position
I:complement(173277..177449)
Genome browser
AA seq
1390 aa
AA seq
DB search
MNAITKSFTGRKRIRKSFGRIPEIAPMPNLIDVQRASYETFLQANVSPDARTPTGLQEVF
RSVFPINDFAGRGRLEFVSYEFEEPKYDVEECIQRGLTFSAPLKVILRLIVWDVDEDTGS
RSIRDIKEQPVYMGDMPLMTDNGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYL
FAARVIPYRGSWLDFEFDAKDLIYVRIDRKRKLPVTTLLYALEGAASEAARKAKAAEGGD
VDALDIKGMDDNEILSYFYGEVKFVKTPKGWARPFDADAFRGLKLLAPLVDAETGEVVAE
AEAKLTARMVRKIAEKTREVLVGDIDLIGRFIAHDIVNYDTGEIYGEAGEEITEARLAAL
EEAGVTELPLLAIDAANGPWIRNTLTVDKNSSRDEALIDIYRVMRPGEPPTAETAEAMFH
GLFFDPDRYDLSSVGRVKMNMRLDLDVPDTVRVLRKEDILRTIKVMCELKDGRGQIDDID
NLGNRRVRSVGELMENQYRVGLLRMERAIRERMGSVDIDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLATYAKVNKYGFIETPYRLVKDGVLQDGWKYLSAMEEEKLIVAQADAKQSAD
GALTDELVSVRRGGDFRLVPPTEVTACDVSPKQLVSVAAALIPFLENDDANRALMGSNMQ
RQAVPLVRSDAPLVGTGMEAAVAHDSGATIVAKRDGIVDQIDGARIVVRATDANGSTQGV
DIYRLRKYSRSNQSTCINQRPLVHVGNQVKAGDIIADGPSTELGELALGRNVLVAFMPWN
GYNFEDSILISERIAKDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALRNLDEA
GIVYVGAEVNPGDILIGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGTTGTI
VDVRVFSRRGVDKDERAMAIERAEIERLSKDRDDERGIQERSFYSRLREKLLGQVAGAGF
KGIRSGTEITDAVLDEQPRGAWRNIVVASDAVMAELETLRREFDASVQKIQARFDSKVEK
LQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLEDGTSVD
IVLNPLGVPSRMNVGQILETHLGWACANLGRDIGNLVDDYQRTGEKRQELLDRLKDVYGD
KIYEDDIANMSNDELIELANNLRKGVPIATPVFDGASIPDIEAMLEKAGVNKSGQSQLID
GRTGEPFERKTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVREQDDFEAGIPESFNVLIKELKSLG
LNVELEQGAE
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaatcaccaaatcgttcacaggacggaagcggattcgcaagagtttcgggcgg
attcccgaaatcgctccgatgccgaacctgattgatgtgcagcgcgcgtcttacgagacg
tttcttcaggcaaatgtatcgcctgatgcgcgcacgccaacaggtttgcaggaggtcttc
cggtctgttttcccgattaacgattttgctggtcgggggcggcttgaattcgtcagttac
gaattcgaagaacccaaatatgatgttgaagagtgcattcagcgcggtctgacgttttcc
gccccgctgaaggttatcctgcgtctcattgtgtgggacgtggatgaagatacaggttca
cgctccattcgcgatatcaaggagcagccggtgtacatgggcgacatgcccctgatgacc
gataacggaaccttcattatcaatggcaccgagcgtgttattgtcagccagatgcaccgt
tctcccggtgtgtttttcgatcacgataaaggcaagacgcattcttccggcaagtatctg
tttgccgcgcgtgtgatcccctaccgtggttcctggcttgactttgaatttgacgccaag
gatctgatttacgtccgtattgaccgtaagcgtaagctgccggtcaccacgctgctttac
gcccttgaaggtgctgcttctgaagccgcccgcaaggcgaaggctgctgagggtggcgat
gttgatgcccttgatatcaagggtatggatgacaacgaaatcctgtcctacttctacggt
gaagtgaagttcgtcaaaacccccaagggttgggcacgtccgttcgatgctgatgctttc
cgtggcctgaagctgctggcaccgctggtggatgctgaaaccggtgaagtggtcgctgaa
gcggaagctaagctgaccgcgcgcatggtgcgtaagattgcggaaaaaacccgtgaagtg
ctggtgggtgacattgacctgatcggtcgtttcatcgcgcacgacattgtcaattacgac
acgggcgaaatctacggcgaagccggtgaggaaatcacggaagcgcgtctggcggctctt
gaagaagcaggtgtgacggaactgccgttgctggcgattgatgctgccaatggcccgtgg
atccgtaatacgctgaccgttgataaaaacagctctcgtgatgaagcgctgattgatatc
tatcgtgtcatgcgtccgggtgagccgccgacggctgaaacagccgaagccatgttccac
ggcctgttctttgatcctgaccgttatgatctgtcttccgttggtcgcgtgaagatgaac
atgcgtcttgatctggatgtgcccgacaccgtgcgcgtgctgcgtaaggaagacatcctg
cgcaccatcaaggtgatgtgtgaactcaaggatggccgcggccagattgacgatattgat
aacttggggaaccgtcgtgtccgctctgtgggcgagctgatggaaaaccagtatcgtgtc
ggtctgctgcgcatggagcgcgctatccgtgaacgtatgggctctgtcgatatcgacacg
gtcatgccgcatgatctgatcaatgccaaacctgctgctgctgctgtgcgcgagttcttc
gggtcttcccagctcagccagtttatggatcagaccaacccgctgtctgaagtcacgcac
aagcgtcgtctttcagcactgggtccgggcggtctgacccgtgagcgtgcaggctttgaa
gtgcgtgacgttcacccgactcactatggccgtatctgcccgattgaaacgccggaaggt
ccgaacattggtctgatcaactccctggcaacctatgccaaggtgaacaagtacggcttt
attgaaacaccgtatcgtctggtgaaggacggcgttcttcaggatggctggaaatatctt
tccgccatggaagaagaaaagctgatcgttgctcaggccgacgccaagcagagtgctgat
ggcgcactgacggacgagctggtctccgttcgtcgtggtggggacttccgtctggtgccc
cccactgaagtgacggcctgtgacgtgtcacccaagcagcttgtttccgttgccgccgcg
ctcattccgttccttgagaacgatgacgcgaaccgcgcactgatggggtccaacatgcag
cgtcaggctgtgccgctggtgcgttccgatgcgccgctcgttggcactggcatggaagct
gctgtggctcatgactctggtgcaaccattgttgccaagcgtgatgggattgtggaccag
attgacggggcacgtatcgttgtgcgtgcaacggatgccaatgggtccacgcagggcgtc
gatatctatcgtctgcgtaaatattcccgctccaaccagtccacctgtatcaaccagcgt
ccgctggtgcatgtgggcaatcaggtgaaggccggggacattattgcggatggtccgtcc
accgaactgggtgaactggctctgggccgtaacgtgctggtcgcgttcatgccctggaat
ggttacaacttcgaagattccatcctgatctccgaacgtattgcgaaagatgacgtcttt
acctcgatccatatcgaggaatttgaagtcatggcgcgtgataccaagctgggtcaggaa
gaaatcacgcgtgatatccccaacgtgggggaagaagcgctgcgtaacctggacgaagct
ggtattgtttacgttggggctgaagtgaaccccggtgatatcctcatcggtaaggtcacg
ccaaagggtgaaagcccgatgacgccggaagaaaagcttctgcgcgccatctttggtgaa
aaagcgtctgacgtgcgtgatacctccctgcgtctgccgcccggcaccaccggcaccatt
gttgacgtgcgcgtcttctcccgtcgcggcgtggataaagatgaacgcgccatggcgatt
gaacgggcggaaatcgaacgcctgtccaaagaccgtgatgatgaacgcggtattcaggaa
cgctccttctacagccgtctgcgtgaaaaactgctgggtcaggttgccggtgccgggttc
aagggcatccgctctggcacggaaatcacggatgcggttctggatgagcagccccgtggt
gcatggcgtaacattgttgtggcctctgatgcggtcatggctgagctggaaacgctgcgt
cgtgaatttgatgcctctgtgcagaaaattcaggctcgctttgacagcaaggttgaaaag
ctgcagcgcggtgatgaactgccgcccggcgtgatgaagatggtcaaggtgtttgttgcc
gtgaagcgtaagcttcagccgggtgacaaaatggccggtcgtcacgggaacaagggtgtg
gtgtcccgcgtggtgccggttgaagacatgccgttccttgaagacgggacgtctgttgat
atcgtgctgaacccgttgggtgtgccgtcccgtatgaacgtggggcagattctggaaacg
catctgggttgggcctgcgcaaatcttggccgtgatattggtaatctggttgatgattat
cagcgcacgggtgagaagcgtcaggaactgcttgatcgccttaaagacgtgtatggcgac
aagatctatgaggacgacattgctaacatgagcaatgatgaactcattgaactggcgaac
aatctgcgcaagggcgttcctatcgccacgccggtgtttgatggtgcttccattccggat
attgaagccatgcttgaaaaagcgggcgtcaacaaatccggtcagtcccagttgattgat
ggccgcacgggcgagccgtttgagcgtaagaccactgttggttatatttacatgctcaag
ctgcaccatcttgttgatgacaagatccatgcgcgttccatcgggccttactcgcttgtt
acgcagcagccgctgggtggtaaggcgcagttcggtggtcagcgctttggggaaatggaa
gtctgggcgcttgaagcttatggcgctgcctatacgctgcaggaaatgctgacggtgaaa
tcggatgacgtatccggtcgtaccaaggtttatgaagccattgtgcgtgagcaggatgac
tttgaagccggtattcctgaaagctttaacgttctgatcaaggaactgaagtctcttggt
ctgaatgttgagctggagcagggggcagaataa
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