| Entry |
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| Name |
(RefSeq) CCR4-NOT transcription complex subunit 1
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| KO |
| K12604 | CCR4-NOT transcription complex subunit 1 |
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| Organism |
atd Aethina tumida (small hive beetle)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:atd00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109599944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:atd03019]
109599944
Messenger RNA biogenesis [BR:atd03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109599944
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109599944
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:join(33445631..33445732,33446024..33446230,33446295..33448164,33450420..33450826,33451095..33453079,33453756..33454200,33455387..33455920,33455977..33456909,33459581..33459918,33459977..33460240,33460510..33460585)
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| AA seq |
2386 aa
MNLDSLSFTLSQISYLVESLTKKNHKQVVADLTKLVSLHGLEADRHLLQCLFSSVDFSES
ANKNSVPSIQSQVLLNQFANLLNKPSLLTSVCYLTDNRLVTHKTLKFGPHFFVQLSKCLR
LSAVQEVVFALALRHSSNPEVANLAQNHLRACVPALVQSYIDTEGSSRQHEGGLHETTPE
VLHLILSAVLKAPKEVGLTNNIHTSFLSTLQKDFPKELVPVVLSPLVYPEQCEIAPEMSS
EGPGLSGGMLETSLADVIGEIGYTFTASVEECRNHLIKLGGRDITPGVVARVLSVMCRTH
SGLDDAFNKNSERVSWNIEVFIQALKEVVQNIQWNSVAAELDHPDFLIKDRPGLALLINA
IRQGIQSMGFHPETFPIDQFYKRWVNVDGQFSLIHSILKNPDIFCFSEYPCVSVSVEVLK
TPPEQDSKDLANWRSLNLIELLLHMSEVGLYNHVQELFKFPLNNCPDVLVLALLQISGPV
TLLRQELFTNLIPIFLGNHPNSAIILHNVWHTQNLNIKPIIMHAMAEWYSRGECDQTRLS
RILDVAQDLKALSMLLNAQNAQSYPFIIDLACLASRREYLKLEKWLSDKIREHGEPFVLA
CIKFLHRRIQQVTKSDELSMKNAALPTETLTTMIVCLQSAIQSVGPECQDHIVATVNNAS
MILKQRQQQQQQQQQQQAQQPAAILRGRGVEGAMNPSVFATGQLYNHTAVDAIPGLATNL
AGLNLTGPASSAFSIQAGLGQLVSSPGSPSRILNAGPSNSPFPMMPMGHQGPVGGTSSSI
VLGVNQMNNMGRMPNPTIDKTRLPDYNLFPEVSPNVSKEIEDEANGYFQRIYNHPPNPIL
SIDEVLDMLRQFQDSHKQREKEVFNCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIERG
IVTSYIALGLALRFVLEALKKPEGSKMYYFGIAALDRFKSRLKEYHKYCEHVRAIPHFSD
FPQHLQEYVEYGLQSMEPPNKPQGQVLPANLAAMLAPPTTPVTQVYKSNSSIAAISNSKT
STTTASSQSMGSRPSIANATNIDTLLVATEKEEKLVAPPEVIQDKTAFIFNNLSQLNLKN
KCDELRDLITEEYYAWLSQYLVMKRASIEFNFHVLYSNFLDTLAVSEIMRMVTRETFRNI
KVLLRSDKEIANFSDRSLLKNLGHWLGMLTLGRNKPILQIDIDLKALLVEAYHKGQQELL
YVVPFVAKVLESCSKSKVFKPPNPWTMAIMNVLAELWHEQDLKLTLKFEIEVLCKNLDID
VSQLKPTMYLKDPERIRKIEYQLSPPTKKETNATTMAVNVQPGNLNDPELSNIMPNQTAG
SPVVQNNSTTPTSSMAGPPDPRFSYSDIQIVGMVAFQSHTIVSPSIMLFQNHPQLKPLVK
TSIERAVQEWIAPVVDRSIKIALQTCEQVIRKDFALDGDENRMRMAAHYMVRNLTAGMAM
ITCRDQLLTAINTHLKTALLANLGTPTVQQKEMIDHAATVIANENMELACAFVQKTAVEK
AIPEIDKRLINEYEMRKQARQEGRRYCDPGVLSFHAERMPEPIRLKVGGISAAQMAVYEE
FARNIPGFLPNERDTILMSTKQTTPIDAQQQPQPQPQQPHPSTPFQLAQASVHNDELGVL
YEKLALELEQFIQAIGAQAQYQLIANCLTMQRDYLMHSIRSRETPPANIVQKSVECLQEG
LTPTMNDTDLVVIKFKEIIVRILKSLQDPRVFGQQWTNKVVTRCLTECREELRYNIDAFD
TLLKSGLVNINQYDMALANCMENGLNYIAVTFAMQLVQMYLIDDRTNQYIVDADLCNTID
MLAKINSHARQPPEGLTNMIDILRQSHEPNFFGERTPIGPTVHIHNGIMQVRAPSYEDPP
GLVEKTDYLLRDWITIYTSQHQGRDSTKAFSMFVHQMNVHGILKTDDLITRFFRLSTQLC
VETVYRSLTDKSVNIALMRPKCYHTLDAFVRLVALLVKHSGEANNTTTKIHLLNKVLGIV
AGCLLQDHEMRSVEFQQLPYQRIFTMLFLELNTPEPVLEAINYHVLTAYCHTLHILRPSK
AAGFCYAWLELVSNRVFMGRMLATTPQQKCWPLYAQLLIDLFKYLAPFLRNAELAKPVTM
LYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNL
KVDMLAEITYAPRILTNISLLITPAQFKKDLDSYLKARAPVTFLSELRGNLQVSNEPGVR
YNIQLMNALVLYVGIQAINHIRNKGHQPNMSTITHSAHMDIFQNLAVDLDTEGRYLFLNA
IANQLRYPNSHTHYFSCTLLYLFAEANTEAMQEQITRVLLERLIVNRPHPWGLLITFIEL
IKNPTYHFWEHEFVHCAPEIEKLFESVARSCMVNKTVQPQEGEIQE |
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| NT seq |
7161 nt +upstreamnt +downstreamnt
atgaacctagactcgttgtcctttactttgtcacaaataagttatttagttgagtcgctc
actaaaaagaatcataaacaagtagtagcggacctaacgaagttagtcagtttgcatggt
ctggaggcggaccgtcacttgctccaatgtctgttttcatccgtggacttttctgagtct
gcaaacaagaattcagtaccatcaatccaaagtcaggtcctgctgaatcagtttgccaac
ttactgaacaaaccatcactgttaacatctgtttgttacctcacagacaatcgactagtt
acccacaagactttgaaatttggaccccatttctttgttcagttgagcaagtgccttcgc
ctctcagctgtccaggaagttgtatttgcccttgctttgcgccactcttccaaccccgag
gtcgcaaatcttgcccaaaaccatttgagagcttgtgtacctgctcttgttcaatcctat
attgacactgaagggagcagccgtcagcacgagggaggacttcacgaaacaacaccagaa
gttctccatctcatcttatctgctgtacttaaagctcccaaagaagtaggacttactaat
aacatccacaccagttttttaagcaccttgcaaaaggatttccctaaagaactagttccc
gtagtgctatcaccattagtgtacccagaacagtgtgaaattgctccagaaatgtcatcg
gaaggccccggtctatccgggggtatgttagaaacatcacttgctgatgtaattggtgaa
attggttacacatttaccgcgtcagtggaagaatgtcgaaatcatttaatcaaacttggg
ggcagagatatcaccccaggtgttgtagccagggttctatcagttatgtgcagaacacac
agtggccttgatgacgccttcaataaaaattcagagagagtctcatggaacattgaagta
tttatacaagctctaaaagaagttgtacaaaacattcaatggaacagtgtggccgctgaa
cttgatcatcctgatttcctcatcaaagataggcctggattggctcttctcattaatgcc
attagacaaggtatacaatcaatgggtttccatccagaaaccttccccattgatcagttt
tacaaaaggtgggtcaatgtagatggtcagtttagtctgatccattccatcctcaagaat
cctgacatattctgtttttctgaatatccttgtgtatcagtatcagtagaagttttaaaa
actccccctgaacaagacagcaaagatttggccaactggcggtcactaaacctcatcgag
ttactccttcacatgtcggaagtcggcctctataatcacgtccaagaactgttcaaattt
ccattaaataattgtccagatgttttagtactggccctcctacaaatctcaggtccagtc
acacttttaaggcaggaactattcaccaaccttatacctattttcttgggcaatcaccct
aattcggccataatcctgcacaacgtctggcacacccaaaacctcaacatcaaacccatt
ataatgcatgccatggccgaatggtactccagaggcgagtgcgatcagaccagactatcc
cgcatcttagacgtagctcaagaccttaaagctctctccatgcttcttaacgcgcaaaac
gcccaatcctatccgttcatcatcgacctggcctgtctggcatcgcgacgcgagtatctc
aaactggagaaatggctcagcgacaagatacgcgagcacggcgaaccgttcgtactagcg
tgcatcaagttcctgcatcggcggatacaacaggtcaccaaatcggacgaactgagcatg
aagaacgcggcactccccaccgaaacactaacgacgatgatagtctgtctgcagagcgcg
atccagtcggtcgggcccgaatgtcaggatcacatcgtggccaccgtgaacaacgccagc
atgatactcaaacagaggcagcagcagcagcaacaacagcagcagcagcaggcacagcag
ccggcggcgatactcagaggtcgcggcgttgagggggcgatgaatccgtccgtcttcgcg
acgggtcagctctacaatcacacggcggtcgatgcgattccgggactcgcaacaaactta
gccggcctcaacttgactggaccggccagttctgcgttcagcatccaggccggtctgggc
cagctggtgtcgtcgccgggctcgccgtcccgcatcctgaacgccggcccgtccaacagt
ccgttcccgatgatgccgatgggtcatcagggtccggtcggcggcaccagttcgtccata
gtgctcggcgtgaaccagatgaacaacatgggacgcatgccgaatccgacgatcgacaag
acacgactgcccgactacaacctgttcccggaggtgtcgccgaacgtttcgaaggagatc
gaggacgaggcgaacggctacttccagcggatctacaaccatccgcccaatcccattttg
tccatagacgaagtgttggacatgcttaggcagttccaagactcgcacaaacaacgtgag
aaagaagtttttaactgcatgctgcgcaacttattcgaagaatacaagtttttcccccaa
tatcccgataaagaactgcacataactgcccagctattcggcggcataatcgaacgaggc
atagtgacatcctacattgctctaggcctagccctacgcttcgtcctggaggcacttaag
aagccggaaggctccaaaatgtactacttcggcatcgcggcgttggaccgtttcaagagc
agactgaaagagtaccacaagtattgcgaacatgtgcgtgccataccacatttcagtgat
ttcccacaacacctgcaggagtacgtcgagtacggcttgcaaagcatggaaccgccgaac
aaaccacaaggtcaggttctacccgccaacttggcggcaatgctggcgccacccaccacg
cccgtcactcaagtgtacaaatcaaattcatcaatagctgcgatttcgaacagcaaaacg
agcacgacgacggcgtccagccaatcgatgggcagcagaccatcgatagccaatgcaacg
aacatcgacactcttctagtggcgacggaaaaggaggaaaaattggtggcaccgcccgaa
gtcattcaagacaagactgcgtttatattcaataatttgagtcagttgaatttgaagaac
aaatgcgacgaacttagggatctgataacggaggagtactacgcgtggctctcgcaatat
ctggtcatgaaacgggcatcgatcgaatttaactttcacgtgttgtattcgaatttcttg
gacacgttggccgtttcggagatcatgaggatggtcacgcgggaaacattcagaaacatc
aaagtactgttacgatccgacaaagaaatcgccaatttttccgacaggtctttgttaaaa
aatctgggacactggctgggtatgttgaccctgggccgcaacaaacctatattgcaaatc
gacatcgatctgaaagccctgctagtcgaggcctaccacaaaggacaacaggaactgttg
tatgtggtaccctttgttgccaaggttttagaatcgtgttcaaaaagtaaggtcttcaaa
ccgcccaacccgtggacgatggccatcatgaacgttctggccgagctgtggcacgaacaa
gacttaaaactgacgctaaaatttgaaattgaagttttgtgcaaaaacctagatatagac
gtatcacaattgaagccaacgatgtacctgaaggatcccgaacgcatacgcaagattgag
tatcaactgtccccgccgaccaagaaggagacgaacgccactacgatggcagttaacgta
caacccggcaatctcaacgatcccgaactgtcgaacataatgcccaaccagacggccggt
tcgccggtggtccagaacaacagcacgacgcccacatcgtcgatggccggcccgccagat
cctcgtttctcgtacagcgacatccagatcgttggaatggtcgccttccaatcgcacacg
atcgtcagtccctccattatgctgttccagaatcatccgcagcttaagccgctggtgaag
acgtctatcgaacgtgccgtccaggaatggatagcacctgtggtcgacagatcgatcaaa
atcgccctgcaaacgtgcgagcaagtcattaggaaagacttcgcccttgacggtgacgag
aaccgaatgcgtatggccgcccattacatggtgcggaacctcacagccggcatggccatg
attacctgccgcgaccagctgctgaccgccatcaatacgcacctgaaaaccgccctgttg
gcaaacttgggcacacccaccgtccaacagaaggaaatgatcgatcatgccgccaccgtc
atcgccaacgagaacatggagttggcatgtgctttcgtacagaaaacagcggtggagaag
gctattccagagattgacaaacgattgatcaacgagtatgaaatgaggaaacaggcccga
caagagggaaggcgttactgcgacccgggcgtgttgtcgtttcacgccgagcgcatgccc
gagccgatacgactgaaagtcggcggcatttcggccgcccagatggccgtctacgaggaa
ttcgcccgcaacattcccggcttcttgccgaacgaacgcgacaccatactgatgtcgacg
aaacagacgacgccgatcgatgcgcagcaacaaccgcagccacagccacagcagccgcat
ccgtcgacgccgttccaattggcccaggcctccgtccacaacgacgagctcggagtgttg
tatgagaagctcgcactggaactggagcagttcatacaggcgatcggtgcgcaggcccag
tatcagttgatagcgaactgtttgacgatgcagcgggattacctcatgcattcgattcgc
agcagagagacgccaccagccaatatcgtgcagaagtccgtggagtgcctgcaagaaggt
ctcacgcccacgatgaacgacaccgatctggtggtgatcaaattcaaagagattatcgtc
cgcatcttgaaatcattgcaagatccgcgtgtctttggccaacaatggacgaacaaggtc
gtcacacgttgcctgaccgaatgtcgcgaggagttacgttacaacatcgacgccttcgac
accctcctcaaatccggtctggtcaacatcaaccaatacgacatggcactggccaactgc
atggagaacggtctcaactacatcgccgtcacgttcgctatgcaactggtccaaatgtat
ctgatcgacgaccgaacgaatcaatacatagtcgacgcggatctgtgcaacaccatcgac
atgctggcgaaaatcaattcgcacgcacgacagccgccggaaggactgacgaacatgatc
gacatcttgagacagtcgcacgagcccaatttcttcggcgaacgaacgccgatcggaccc
actgtacatattcacaacggtatcatgcaggtgcgtgcaccaagctatgaggacccgcca
ggtctggtggagaagaccgactacctgctcagggactggataacgatatacacgtcgcaa
catcagggacgcgactcaacgaaggccttcagcatgttcgtccaccagatgaacgtgcac
ggcatactcaagacggacgatctgatcacgcgcttcttccgcctgtcgacacagctgtgc
gtcgagactgtgtaccgatcgctgaccgacaagagcgtcaacatcgcgttgatgcgtccc
aagtgctaccacactttagacgcattcgtcagattggtggcgctcctcgtcaaacattcc
ggcgaggcgaacaacacaacgacgaagatccatctgttaaacaaagttttaggcatcgtg
gccggttgtctgttacaagatcacgaaatgcgttcagtcgaattccaacagttgccttac
cagcgcatcttcacgatgctcttcctcgaactgaacacgcccgaacctgtgctcgaagcc
ataaactatcacgtgctgaccgcctactgtcacacgttgcacatactgcgaccgtcgaag
gccgcaggtttctgttacgcctggctcgaactggtgtccaatcgcgtgttcatgggacgc
atgctggccacgacgccgcaacaaaaatgttggccgctctacgcccaactgctgatcgat
ctcttcaagtacttggcgccgttcttgaggaacgccgaactggccaagccggtgacgatg
ctttacaagggcacgttacgggtgctgctggtgctgctgcacgacttccccgaattccta
tgcgactaccattacggtttttgcgacgtgataccgcccaactgtatccagatgaggaat
ctgattttgtcggcgttcccgcgtaacatgcgcttaccagatcctttcacacccaacctt
aaggtggatatgctagctgagataacatacgcgccgcgtattctgacgaacatctctcta
ctcatcactcccgcccaattcaagaaggatctggactcgtatctgaaggcaagggcgccc
gtcaccttcctgtcggagctgcgaggcaatctgcaagtgtctaacgaacctggcgtccga
tacaacatccagctgatgaacgcgctggtgctgtacgtcggtattcaggccatcaatcac
ataaggaacaaaggccaccagcccaacatgtcgaccatcacgcacagcgcacacatggac
atcttccagaatctcgctgtcgatctcgacacggaaggacggtacttattcttgaatgcg
atcgcgaaccaattgaggtatccgaacagccacacgcattacttctcgtgcacgctcctg
tacttgttcgcggaagcgaacaccgaagcgatgcaggaacagatcacgagagtgctgctc
gaaaggctgatcgtgaacaggccgcatccgtggggcttgctcatcaccttcatcgaactt
atcaagaaccccacctaccacttttgggagcacgagttcgtccattgcgcaccggaaatt
gaaaaactattcgagtcggttgccagatcgtgtatggtaaacaaaactgtccaaccacaa
gagggggaaatacaagagtga |
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