Aethina tumida (small hive beetle): 109602565
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Entry
109602565 CDS
T06105
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03420
Nucleotide excision repair
atd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109602565
09124 Replication and repair
03420 Nucleotide excision repair
109602565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atd04121
]
109602565
03400 DNA repair and recombination proteins [BR:
atd03400
]
109602565
Ubiquitin system [BR:
atd04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
109602565
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109602565
TCR (transcription coupled repair) factors
Cul4-CSA complex
109602565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
109602565
NCBI-ProteinID:
XP_019874533
EnsemblRapid:
ENSATDG00005000951
LinkDB
All DBs
Position
1:join(56435523..56435583,56435647..56435795,56435855..56436406,56436461..56436614,56437179..56437514,56437601..56437937,56437997..56438262,56438320..56438533,56438595..56439049,56439108..56439415,56441008..56441317,56441375..56441658)
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AA seq
1141 aa
AA seq
DB search
MAHHYVVTAHKPTAITACVTGNFTSPQDLNLIVAKNTRLEIYLVTPEGLRPIKEIGLYGK
VAVMKLFRPQHEKKDLLFIVTLRYNAMILECLNNGENIEILTKAYGNVADRIGKPSETGI
LAVIDPKSRFIGLRLYDGLFKIIPLDKDNYELKATNFKMEELQVYDVEFLHGCANPTLIL
IHQDVNGRHVKTHEISWREKEFVKIPWRQDNVETEASIIIPVPSPLGGAIIIGQESILYH
DGITSVVVAPPVIKQSTIVCYAKVDPGGLRYLLGDMAGHLFMLFLETETKGETNEVVKDI
KVEMLGEIVTPECITYLDNGVLFIGSRLGDSQLIKLNTKADEYGSYVTVMESFTNLAPII
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQEHASIDLPSIKGMWAIQVASAGT
LDNTLVLAFVEQTRVLSLNGEEVEETDIPGFAADLQTFYCGNVVHDQIIQITSVSARLVS
AQNKTLLAEWKPPTDSIISVVACNQTQIAVSTGSDLYYIEIHPNELILKGLTTLDVEIAC
LDISPLGEGKQRSDVVAVGLWTDISVRILRLPDLTEATKEMLGGEIIPRSVLMTNFEGQN
YLLCALGDGSMFYFLFNNEITALTEKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNMKEVNHMCSLNAEAYPDSLALATDNSVTIGTIDEIQKLHIRTVPLQES
PKRIAYQEASQTFGVITSRIDIQDSTGLNPARQSASTMTQSVTVSSSVSSLAVNKSSGAG
AASTTSSLVPDYGQEVEIHSLLIIDQNTFEVLHAHQLMQQEYAMSLISCQLGTDHNTYFI
IGTAVVNPEEPEPKQGRLLVFHWNENKLFQVSEKEIKGACYSLAEFNGKLLASINSTVRL
FEWTAEKELRLECSHFNNIISLFLKTKGDFILIGDLMRSMTLLQYKTMEGSFEEISRDYN
PNWMTAIEILDDDIFLGAENSYNLFVCQKDSAATTDEERAQMQEVGQFHVGDMINVFRHG
SLVMQNLGESSTPTRGCVLFGTVGGAIGLVTQIPQNFYEFLLELQTKLSTVIKSVGKIEH
SYWRAFHTDIKTEACEGFIDGDLIESFLDLSQEKMKEVADACQQVTVEHLVKMIEDLTRI
H
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggcccatcactatgtggtgacggcacacaagccgacagcaataacagcatgcgttaca
ggcaactttacgtcgccgcaagacttaaacttaattgtcgcgaaaaatacgcgtctcgaa
atatatttggttacaccagagggtctgaggcccataaaggaaattggtttatatggcaag
gtagctgttatgaagctattcaggccacagcatgagaagaaggacttgctttttatcgtt
acattacgttacaatgccatgatcttggagtgcttgaataatggggagaacattgaaatt
cttacaaaagcttatggtaatgttgcagatcgtattggtaaaccttcagaaactggtatc
ttggccgtgattgacccaaaatctcgttttattggtctcagactatacgatggtctcttt
aaaataattcctctggataaagacaactatgaattgaaagcaaccaacttcaaaatggaa
gagttgcaggtgtatgatgttgagtttctccatgggtgtgctaacccaacacttattctc
attcatcaagatgtaaatgggagacatgttaaaacccatgaaatatcctggagggaaaaa
gaatttgtcaaaattccgtggagacaagacaatgtcgaaactgaggcctctattataata
ccagtaccatctcctcttggaggggccattataattggccaagaaagtattttatatcat
gatggtatcacatcagttgttgtagcaccaccagttatcaagcaaagcactattgtatgt
tatgcaaaagtagaccctggaggtttgagatatttgttaggagatatggctgggcactta
tttatgttgtttttggaaacagaaactaaaggggaaactaatgaagtggtgaaagacata
aaagttgaaatgcttggagaaattgttacgccggaatgtataacttatttggacaacggc
gttctgtttattggttctcgcctgggcgactcgcaactcataaagttgaacacaaaggcg
gatgaatacggttcttatgtgactgttatggaatcgttcacgaatcttgcgccaatcata
gacatgtgcgttgtggatttggagcgccagggtcaaggacaattggtcacttgttcgggt
gctttcaaggaaggttcattgcgtataattcgcaacggaattggcattcaggagcatgca
tccatcgacttgcccagcatcaagggcatgtgggcgatacaagttgcttccgccggaacg
ttagataatacacttgtattagcttttgtggaacaaacacgcgtgttgagcctgaacggc
gaggaggtggaggagacagatatacctgggtttgctgcagatttgcagaccttctattgt
ggcaatgtcgttcacgaccaaataattcaaatcacttcggtgtcggcccgtttagtgtct
gcccaaaataaaactttgcttgcagagtggaagccaccaacagattcaatcataagcgtt
gtcgcatgcaatcaaactcagatcgccgtatcaacgggatctgatctctactacattgaa
atccaccctaacgagctaattcttaaaggacttaccacattggatgtggaaattgcatgc
cttgatatcagtcctctaggcgaaggaaagcaaaggtctgacgtggtggcagtgggtctg
tggaccgacatatcggtaagaatcttgcgtttaccagacttgactgaagccacaaaagaa
atgctgggcggtgaaattatcccacgatctgtgcttatgacgaacttcgagggccagaat
tacttgctttgtgcgctaggagatggttccatgttctatttcctcttcaacaacgaaatt
acagcgttgaccgaaaagaagaaagtcactttaggtacacagcccaccgttttaaagacg
ttccgttcgctcagtaccacaaatgtatttgcatgttcggatagacccacagttatttat
tcgtcaaatcataaattagtattctccaatgttaatatgaaagaagtaaatcatatgtgt
tcacttaacgctgaagcatacccagacagtttagccctcgccacagataattcagtaaca
ataggcactattgatgaaatacaaaaattgcatattcgaacagtgcccctgcaagaatcg
ccgaaacgcattgcctatcaggaagcgtcacagacgttcggtgttattacttcccgcatc
gacatccaagactcgacaggtctgaacccggcccgtcagagtgcctccactatgacacag
tcagtgactgtctccagcagtgttagcagcttagcggttaacaagtcaagcggagctggc
gccgccagtaccactagcagtttggtccccgactacggacaagaggttgaaatccatagt
ctactgatcattgatcaaaataccttcgaagtattgcacgcccatcagctgatgcaacag
gaatatgccatgtcattgatttcttgtcaacttggaactgatcacaacacctattttatt
ataggtacggccgttgtaaatccggaagagcctgaaccaaagcagggacggttgctggtg
ttccactggaatgaaaacaagctattccaagtctctgaaaaagaaattaagggtgcttgt
tactcgctggccgagttcaatggtaaattactggctagtataaacagcactgtcagattg
ttcgagtggactgccgagaaggaactgcgattggaatgttcccatttcaataatatcatc
tccttatttttaaagacgaaaggcgactttatacttattggagatctgatgaggagcatg
actctcctacagtacaaaacgatggagggcagtttcgaagagatttctcgtgattacaat
ccgaattggatgacggccattgagatccttgacgacgatatattcttgggcgccgaaaat
agctataacctcttcgtatgccagaaagatagtgctgcaacaacggacgaggaacgtgcc
cagatgcaggaagttggacagtttcatgtgggcgacatgataaatgtctttagacacggt
tcgctggtcatgcagaatcttggcgagtcttcgacgcccactaggggatgtgttttattc
ggtacagttggcggagctattggtttggttactcaaattccgcaaaacttctacgaattc
ttgctcgagttgcaaacaaaattgtcgacggtgatcaagtcggttggaaaaattgagcat
agttattggagggcgtttcacacagacattaaaactgaagcgtgcgaaggatttattgat
ggggacttgattgaaagttttctggatttgtcccaggagaagatgaaggaggtggctgat
gcttgtcagcaagtaactgttgagcacttagtgaaaatgattgaggatttgactagaata
cattaa
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