KEGG   Aethina tumida (small hive beetle): 109602565
Entry
109602565         CDS       T06105                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03420  Nucleotide excision repair
atd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109602565
  09124 Replication and repair
   03420 Nucleotide excision repair
    109602565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atd04121]
    109602565
   03400 DNA repair and recombination proteins [BR:atd03400]
    109602565
Ubiquitin system [BR:atd04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     109602565
DNA repair and recombination proteins [BR:atd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109602565
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109602565
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 109602565
NCBI-ProteinID: XP_019874533
EnsemblRapid: ENSATDG00005000951
LinkDB
Position
1:join(56435523..56435583,56435647..56435795,56435855..56436406,56436461..56436614,56437179..56437514,56437601..56437937,56437997..56438262,56438320..56438533,56438595..56439049,56439108..56439415,56441008..56441317,56441375..56441658)
AA seq 1141 aa
MAHHYVVTAHKPTAITACVTGNFTSPQDLNLIVAKNTRLEIYLVTPEGLRPIKEIGLYGK
VAVMKLFRPQHEKKDLLFIVTLRYNAMILECLNNGENIEILTKAYGNVADRIGKPSETGI
LAVIDPKSRFIGLRLYDGLFKIIPLDKDNYELKATNFKMEELQVYDVEFLHGCANPTLIL
IHQDVNGRHVKTHEISWREKEFVKIPWRQDNVETEASIIIPVPSPLGGAIIIGQESILYH
DGITSVVVAPPVIKQSTIVCYAKVDPGGLRYLLGDMAGHLFMLFLETETKGETNEVVKDI
KVEMLGEIVTPECITYLDNGVLFIGSRLGDSQLIKLNTKADEYGSYVTVMESFTNLAPII
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIQEHASIDLPSIKGMWAIQVASAGT
LDNTLVLAFVEQTRVLSLNGEEVEETDIPGFAADLQTFYCGNVVHDQIIQITSVSARLVS
AQNKTLLAEWKPPTDSIISVVACNQTQIAVSTGSDLYYIEIHPNELILKGLTTLDVEIAC
LDISPLGEGKQRSDVVAVGLWTDISVRILRLPDLTEATKEMLGGEIIPRSVLMTNFEGQN
YLLCALGDGSMFYFLFNNEITALTEKKKVTLGTQPTVLKTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNMKEVNHMCSLNAEAYPDSLALATDNSVTIGTIDEIQKLHIRTVPLQES
PKRIAYQEASQTFGVITSRIDIQDSTGLNPARQSASTMTQSVTVSSSVSSLAVNKSSGAG
AASTTSSLVPDYGQEVEIHSLLIIDQNTFEVLHAHQLMQQEYAMSLISCQLGTDHNTYFI
IGTAVVNPEEPEPKQGRLLVFHWNENKLFQVSEKEIKGACYSLAEFNGKLLASINSTVRL
FEWTAEKELRLECSHFNNIISLFLKTKGDFILIGDLMRSMTLLQYKTMEGSFEEISRDYN
PNWMTAIEILDDDIFLGAENSYNLFVCQKDSAATTDEERAQMQEVGQFHVGDMINVFRHG
SLVMQNLGESSTPTRGCVLFGTVGGAIGLVTQIPQNFYEFLLELQTKLSTVIKSVGKIEH
SYWRAFHTDIKTEACEGFIDGDLIESFLDLSQEKMKEVADACQQVTVEHLVKMIEDLTRI
H
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggcccatcactatgtggtgacggcacacaagccgacagcaataacagcatgcgttaca
ggcaactttacgtcgccgcaagacttaaacttaattgtcgcgaaaaatacgcgtctcgaa
atatatttggttacaccagagggtctgaggcccataaaggaaattggtttatatggcaag
gtagctgttatgaagctattcaggccacagcatgagaagaaggacttgctttttatcgtt
acattacgttacaatgccatgatcttggagtgcttgaataatggggagaacattgaaatt
cttacaaaagcttatggtaatgttgcagatcgtattggtaaaccttcagaaactggtatc
ttggccgtgattgacccaaaatctcgttttattggtctcagactatacgatggtctcttt
aaaataattcctctggataaagacaactatgaattgaaagcaaccaacttcaaaatggaa
gagttgcaggtgtatgatgttgagtttctccatgggtgtgctaacccaacacttattctc
attcatcaagatgtaaatgggagacatgttaaaacccatgaaatatcctggagggaaaaa
gaatttgtcaaaattccgtggagacaagacaatgtcgaaactgaggcctctattataata
ccagtaccatctcctcttggaggggccattataattggccaagaaagtattttatatcat
gatggtatcacatcagttgttgtagcaccaccagttatcaagcaaagcactattgtatgt
tatgcaaaagtagaccctggaggtttgagatatttgttaggagatatggctgggcactta
tttatgttgtttttggaaacagaaactaaaggggaaactaatgaagtggtgaaagacata
aaagttgaaatgcttggagaaattgttacgccggaatgtataacttatttggacaacggc
gttctgtttattggttctcgcctgggcgactcgcaactcataaagttgaacacaaaggcg
gatgaatacggttcttatgtgactgttatggaatcgttcacgaatcttgcgccaatcata
gacatgtgcgttgtggatttggagcgccagggtcaaggacaattggtcacttgttcgggt
gctttcaaggaaggttcattgcgtataattcgcaacggaattggcattcaggagcatgca
tccatcgacttgcccagcatcaagggcatgtgggcgatacaagttgcttccgccggaacg
ttagataatacacttgtattagcttttgtggaacaaacacgcgtgttgagcctgaacggc
gaggaggtggaggagacagatatacctgggtttgctgcagatttgcagaccttctattgt
ggcaatgtcgttcacgaccaaataattcaaatcacttcggtgtcggcccgtttagtgtct
gcccaaaataaaactttgcttgcagagtggaagccaccaacagattcaatcataagcgtt
gtcgcatgcaatcaaactcagatcgccgtatcaacgggatctgatctctactacattgaa
atccaccctaacgagctaattcttaaaggacttaccacattggatgtggaaattgcatgc
cttgatatcagtcctctaggcgaaggaaagcaaaggtctgacgtggtggcagtgggtctg
tggaccgacatatcggtaagaatcttgcgtttaccagacttgactgaagccacaaaagaa
atgctgggcggtgaaattatcccacgatctgtgcttatgacgaacttcgagggccagaat
tacttgctttgtgcgctaggagatggttccatgttctatttcctcttcaacaacgaaatt
acagcgttgaccgaaaagaagaaagtcactttaggtacacagcccaccgttttaaagacg
ttccgttcgctcagtaccacaaatgtatttgcatgttcggatagacccacagttatttat
tcgtcaaatcataaattagtattctccaatgttaatatgaaagaagtaaatcatatgtgt
tcacttaacgctgaagcatacccagacagtttagccctcgccacagataattcagtaaca
ataggcactattgatgaaatacaaaaattgcatattcgaacagtgcccctgcaagaatcg
ccgaaacgcattgcctatcaggaagcgtcacagacgttcggtgttattacttcccgcatc
gacatccaagactcgacaggtctgaacccggcccgtcagagtgcctccactatgacacag
tcagtgactgtctccagcagtgttagcagcttagcggttaacaagtcaagcggagctggc
gccgccagtaccactagcagtttggtccccgactacggacaagaggttgaaatccatagt
ctactgatcattgatcaaaataccttcgaagtattgcacgcccatcagctgatgcaacag
gaatatgccatgtcattgatttcttgtcaacttggaactgatcacaacacctattttatt
ataggtacggccgttgtaaatccggaagagcctgaaccaaagcagggacggttgctggtg
ttccactggaatgaaaacaagctattccaagtctctgaaaaagaaattaagggtgcttgt
tactcgctggccgagttcaatggtaaattactggctagtataaacagcactgtcagattg
ttcgagtggactgccgagaaggaactgcgattggaatgttcccatttcaataatatcatc
tccttatttttaaagacgaaaggcgactttatacttattggagatctgatgaggagcatg
actctcctacagtacaaaacgatggagggcagtttcgaagagatttctcgtgattacaat
ccgaattggatgacggccattgagatccttgacgacgatatattcttgggcgccgaaaat
agctataacctcttcgtatgccagaaagatagtgctgcaacaacggacgaggaacgtgcc
cagatgcaggaagttggacagtttcatgtgggcgacatgataaatgtctttagacacggt
tcgctggtcatgcagaatcttggcgagtcttcgacgcccactaggggatgtgttttattc
ggtacagttggcggagctattggtttggttactcaaattccgcaaaacttctacgaattc
ttgctcgagttgcaaacaaaattgtcgacggtgatcaagtcggttggaaaaattgagcat
agttattggagggcgtttcacacagacattaaaactgaagcgtgcgaaggatttattgat
ggggacttgattgaaagttttctggatttgtcccaggagaagatgaaggaggtggctgat
gcttgtcagcaagtaactgttgagcacttagtgaaaatgattgaggatttgactagaata
cattaa

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