Actinia tenebrosa (Australian red waratah sea anemone): 116294578
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Entry
116294578 CDS
T07455
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116294578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aten03019
]
116294578
Messenger RNA biogenesis [BR:
aten03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116294578
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116294578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
116294578
NCBI-ProteinID:
XP_031558066
UniProt:
A0A6P8HR61
LinkDB
All DBs
Position
Unknown
AA seq
2467 aa
AA seq
DB search
MSASDSLSFALGQISSAVKDLNKKTYKLAVAEIHELIEKHGFEAERHFFQVLFSSIDFSA
DAKNSGKDYQQVQFLTQECQTLIVKPNFPSILCYAFENPDQKQKTLKPSTQLLPNVSRTL
KLNKVQEVVFGLGLLKSANEELKTHAGQFVKQKLPDLLRSYIDTDTGGGQEGGLSDIAIE
VLHCLLTHVLHGPRELVGVGEDQINAFLDTLRRDFPKERVPVVLAPLLYPNAPDLPANKL
VPDSNPPVKVVTEDDLAELMKEIGYVCCQSIEDCRNTLVQFGLRDIKPAAIARAIGMMVK
TAYGLAQHIPLQQNLNSSASALDKKPEDENQLSTWNIEIFVQVVKELFPGLNWAQVILDL
DYPGFQVPSGEGLKILMEACSRGLQEGFPVEVLYRTWTNTEGQLSWILQLLTHADLFCFT
DYPCEAVMLDTLKILPEEETREISNWKSLTLVETLLRLSEAGHYESVKSIFSFPFKNCPD
ILFFALLQAKPTWNTLSKELLLQLVPIFLSNHPNAASVLQYAWNGQSQSISIRQIIMQAM
ADWYMKGDQDQARLSRILDVAQDLKALSVLLNFHPLLFVIDLAALASRREYLKLDKWLND
KLREHQEKFAEAMITFLKRRCPHLTGITLDKELPKSIQLPTETVIVMLTCLSNIQVPPSM
ADVIRQMIANHGPLTKPRPTPQAIGGALLKRQGSLDSALPTPLTSQVDPLPGLGLSHTTS
TPNSQLPSFPPHPLSIPTSNLGAVGSIGSGLTQPIQKPSSTSQFSHLGIQPPATSNSGLG
SSQSHIFQQLQQAGLGGTLSGSNTDSYRMLSGLNSHKPLGSSLLNQQQQQVMMAQQHRTP
TPEKLRQAPTDVSQVWPGMDQSFSKEVEDEANSYFQRIYNHPPNPTISIDEVLEMLKKFK
DSPIKKERDIFLCMLRNLFEEYRFFPQYPDKELHTTACLFGGIIEQGLVTYMALGIALRY
VLDALRKTYNSKMYMFGIAALDRFKTRLKDYPHYCQHLASIPHFRDFPSSLIEYIEYGQQ
SKEPPLTSRTLTQDQQASAWLSNMDPMASRLLNRTSLGSGSASPTFTTTAVGKPGQTSGT
SSGSPSPKPSLTSSDLTSGTARGKEPSIANASNIDTLLGASEKNEIAQPPEHVQDKIHFI
FNNISQSNLNTKAEEFKNAVQSDFLQWVAQYMVMKRASIEPNFHQLYIDFMDALDSMPDF
AREITKETFRNIKVLLQSEKVPANFSDRSLLKNLGHWLGLLTLARNRPILMRDLDLKSLV
IEAYFKGQQDLLYVVPFVAKVMESAAKSKVFKPPNPWIMAIMALLVELHQVPDLKLNLKF
EVEVLCNTLSLDMKDIKPTELLRDTDKFKTIPQQLASPEKEKLALSTTPSSGTTTATTAG
TQPSQTATPPPPQYAYHEINVSGLSGLAPHIQINPQIPLFQQNPHLKQFVRPSIERAVQE
LVHPVVERSIKICLTTAEMIVKKDFALDPEESRMRAAAHHMVRFMTAGMALITCRDPLLV
SITNTLRSSLQTAFRSANQQQKEMIEHAATVVSEENTELACSFIQKTAVEKVLPEMDKRL
ATEFDVRRHARSEGRRYCDPMILTYQAERMPEQIRLKVGGVNPNQTAVYEEFARSIPGFK
VPPSGETLPMPPLSKPMYDHGILSSEMRTESLGNIHSRQKASIPPPIHEDFRSVDKFSLD
SGAFQGPFPQAMMPEEVVQILNKCAAEIEQHLHAIMAPPSSPPVMTIHSLLDAVVQTRNS
RDNNAAVRLLHKAVEGLLDEVTPLPSDQELALRFRDCHLIVLRGLQDPRGYGINWTSRHV
TKFVCDCVPELKFNVEAIDLLIRGHLINMREFDQHIVQCMDNGLNVNAVHFAIQLVKYVS
DDKHAPHVSEGDLSHTIESLTRMAHSRQNPEGLSSVLESVHNGPSSMPSHHDVPDNKAPG
GPTSLTTNAVPSFSGFEDPPGLHEKVEYLLREWVRLCHQPGAGKDSEKAFSTFVAMMHQQ
GILRSDDLITRFFRICTELCVDVTYRAIADHPNNPTLARSKCFNTLDAYCRLIALLVRHS
GDASNNVTKINLLNRVLSTVATVLFQDHELRHTDFQQLPYQRIFIMLLLELNQPEPVLEA
INFQVLQTFSTVFHALKPSRAPGFAYAWLELISHRLFMSKLLLNTPQQKGWSLFQQLLID
LFKFLAPFLRNAELAKQTHLLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPNCIQMRN
LILSAFPRNMRLPDPFTPNLKVDLLTDIAHSPRILTNFGAAIQPATFKKDLDSYLKTRTP
VTFLTELRSHLQVSTEPGTRYNVPLMNALVLYVGTQAIAYIHSKSGTPSMSTITHSSHMD
IFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCVLLYLFAEANTEAIQEQITRVLL
ERLIVNRPHPWGLLITFIELIKNHQYKFWTHEFVHCAPEIEKLFESVARSCMQQKQVTRE
STSEGQE
NT seq
7404 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccagtgattcgttgtccttcgcgttggggcaaatctcgtctgccgtgaaagat
ctcaataaaaagacatacaagttagctgtggctgagattcacgagctgattgagaagcat
ggatttgaagcagagcggcattttttccaagtattattttcatctattgatttttctgct
gatgcaaaaaattctgggaaagattatcaacaggttcagtttttaacccaagaatgtcag
actctcattgtcaagccaaactttccatccattttatgctacgcatttgagaatcccgac
caaaagcagaaaaccttaaagccgtcaacacagctcttacccaacgtcagcagaactctg
aaactgaacaaagtacaagaggttgtttttgggcttgggctactaaaatcagcaaatgaa
gagcttaaaactcatgctggccagtttgttaaacagaagttaccagatcttctgcgttcg
tatatcgatacagatactggtggaggtcaggagggtggtctgtcagacatagcaatagaa
gttcttcactgtctcctgactcatgtcctccatggaccaagagaacttgttggtgttggt
gaagaccaaatcaatgcctttctggacacgttgagaagagattttcccaaagaacgggtt
ccagtagtgcttgctcctttgctttatccaaatgctccagacttaccagctaacaaactt
gtccctgactcaaatcctcctgttaaggttgttacggaggacgaccttgcagagttgatg
aaagagattggttatgtttgctgtcaaagtattgaggactgtaggaatacattagtacag
tttggacttcgagacattaaacctgctgctattgccagagctattggtatgatggtaaaa
actgcttatggacttgcacagcatataccacttcagcagaacctgaacagcagtgccagc
gcacttgataagaaaccagaagatgaaaaccaactgtctacctggaatattgagattttt
gtccaagttgtcaaggaactgtttccaggcctgaattgggcacaggttattctagacttg
gattatccagggtttcaagtaccgtcaggagaaggactcaagatactcatggaggcttgt
tcaagaggtttacaggaaggttttccagttgaagtgttgtacagaacatggacaaatacc
gagggacagctatcatggattctccagctgttaacccatgcagatttattctgcttcacc
gattatccctgtgaagctgtaatgcttgatacactaaagattttacctgaagaagaaact
agagagatatcaaactggaagtcactgactcttgtggaaacattattgcgtctatctgag
gctggtcactatgagagcgttaagagtatttttagttttccattcaagaattgccctgat
attcttttctttgctttactgcaagctaagccaacatggaacacccttagcaaggagttg
ctacttcagttggtaccaatattcctttccaaccatcccaatgctgccagcgttctacag
tatgcctggaatggacaaagtcagtctatttcaatacgtcagattatcatgcaggctatg
gctgactggtacatgaagggagatcaagatcaggcaaggttatcaaggatcctggatgtg
gcacaggacctcaaggcattatcagttcttctcaacttccatcctctactgtttgtaatc
gacttagctgctttggcatccagaagagaatacctgaagctagacaagtggctgaatgat
aagttaagagaacatcaggaaaagtttgcagaagctatgataactttcctgaagaggcgc
tgccctcatttgacaggaatcaccctggataaagaactacctaaaagcatacagttacca
actgaaacagtcatcgtaatgctgacctgtctgtcaaacatccaagttcctcctagtatg
gctgacgtcattcggcagatgattgccaatcatggtcccctgaccaagccgaggccaaca
ccacaagctattggtggagcattgttaaaaaggcagggaagtcttgattcagcactccca
actcctcttacaagccaggttgatccacttccagggcttggactctcacacaccacctct
acacccaattctcaactcccctccttcccaccacaccctctctccatacccacgagtaac
cttggtgctgtgggtagcattggctcaggcttgactcaacctatccagaaaccatcctca
acctcacagttcagtcacctcggcatacagcctcctgctacttccaactctggcctggga
tcatcgcagagccatatcttccagcagctacagcaagcagggctaggagggactctcagt
gggtctaatactgatagttatcgcatgttatctggtctaaactctcacaagccgttgggt
agctcactgttgaatcagcaacaacagcaggtcatgatggcacagcagcacaggactccc
actcctgaaaaactaagacaagctccaaccgacgtctcccaagtatggccaggtatggac
cagtccttcagcaaggaggtagaagacgaggccaactcctacttccagagaatatacaat
catccacccaaccctaccatcagcatagatgaagtgttggagatgctgaaaaagtttaaa
gacagcccaatcaagaaagaaagggatatatttctgtgtatgctgcgtaacctgtttgaa
gagtaccgattctttcctcaatatcccgacaaggagctgcacacaacagcttgtttgttt
ggaggcatcattgaacaaggacttgtcacgtacatggcactaggcattgctttacgatat
gtactggatgcactgcgcaagacttataacagtaaaatgtacatgtttggtattgccgcc
ctggatagatttaagaccaggttaaaagactatccacattactgtcagcaccttgcttcc
atccctcacttcagggatttcccttcatcactgattgaatacatagaatatggacaacaa
tcaaaagaaccacctttaacaagcagaacattgacacaggatcagcaagcttcagcatgg
ctgtctaacatggatccaatggcatcaaggttattaaacagaacctccttgggatcaggc
agtgctagcccaaccttcactactactgcagtaggaaagccaggacagacctcaggtact
tcatctggctctccttctccaaagccttcattaacatcttcagacttgacatcagggacc
gcacgtggcaaggaaccatctatagctaatgccagtaacattgataccctactgggtgca
tcagaaaagaatgagatagcacaaccacctgagcatgtacaagacaaaatacactttatc
ttcaacaatatatcacaaagcaacctcaataccaaggctgaggagtttaagaatgctgtt
cagtcagactttctgcagtgggtagcacagtacatggtcatgaagagagcaagcattgaa
cctaatttccatcagttatacattgacttcatggatgccctggactctatgccagatttt
gcaagagaaattactaaggaaaccttcagaaatatcaaggttttgcttcaatcagagaaa
gtccctgccaacttctcagatagatccttactaaagaatcttggtcattggttgggtctc
ttgacactggctcgtaacaggccaatactcatgagggatcttgatctcaagtcactggtt
attgaagcatacttcaaagggcagcaggatttgctatatgttgttccatttgttgctaaa
gtcatggaatcagctgctaagagcaaagtattcaagccacctaacccctggattatggct
atcatggctctgctggttgaactacaccaagtaccagacttaaagctcaatttaaagttt
gaggtagaagtactatgtaacacattatcccttgacatgaaggatatcaaacctactgaa
ctacttagggatacagataaattcaagacaataccacaacagcttgcttcaccagagaaa
gaaaagcttgctctatccactaccccatccagtggcaccactactgctacaacagctgga
acacaacctagtcagacagccacacccccaccccctcagtatgcatatcatgagatcaat
gtgtctggtctttctggtctggcaccacatatacagatcaatccacagattccgttgttc
cagcaaaaccctcacctcaagcagtttgtccgtccgtctattgaacgagcagtacaagaa
ctggtccaccctgtggtggaaaggtccattaagatctgcctgacaactgccgagatgatt
gtcaagaaggactttgcgttagatcctgaggaatcccgtatgcgtgctgcagcacatcac
atggttcgtttcatgacagcagggatggcattaattacctgtagagacccattactagtc
agtatcactaacacgctcaggtccagcctacagacagcattcaggagtgctaatcagcag
cagaaggagatgattgagcatgcagcaaccgtagtgagcgaagagaacactgaactggcc
tgttcgttcatccaaaagacggctgtcgaaaaggtccttccagagatggacaaacgcttg
gctacagagtttgatgttcgtagacatgctcgtagtgagggaagacgttattgtgatcca
atgatcttaacatatcaggcagaaagaatgcctgagcaaatcaggctcaaggttggtgga
gtaaaccctaaccaaacagcagtatacgaagagtttgctcgcagtatcccaggattcaag
gtgccaccatcaggcgagaccctacctatgccacctttatccaagcctatgtacgaccat
ggaatactaagcagtgagatgagaactgagtccttaggaaatatccacagcagacaaaag
gcatctattcctcctccgatacacgaggatttccgctcagtagataaattctctctggac
agcggtgccttccaaggcccgttcccacaagcaatgatgccagaggaagtagtccagata
ttgaacaagtgtgcagcagagattgagcaacacttacatgcaatcatggctcctccatca
agccctcccgtcatgaccatccacagcctgctagacgctgtggtacagacacgtaactcc
agggataataatgctgcagtccggcttcttcacaaggctgttgaaggtcttttggatgag
gtcactccgttaccaagtgatcaagaacttgcattacggttccgtgactgtcaccttatt
gtgttacgtgggttgcaggatccacgtgggtatggaatcaattggacgtcaagacacgtt
accaagttcgtttgcgattgtgtcccagagctaaagttcaacgtggaagccatcgatctt
ttgatccgaggtcatcttattaacatgagagagtttgaccaacacattgtacagtgcatg
gacaatggactcaacgttaatgccgtacattttgccatacagttggtcaagtacgtgtcg
gatgataagcacgctcctcacgtatcagagggtgacttgtcgcacaccattgaatctttg
actagaatggctcacagcagacagaaccctgaagggctgtcatctgtacttgagagtgtt
cataatggtccttctagtatgccaagtcatcatgatgttcctgataacaaagcaccaggt
ggacctacctctctcacgactaacgccgtgccatcattctctggattcgaggatcctcca
ggcctccatgagaaggttgaatatctgttacgagaatgggttcgtctttgtcaccaaccc
ggtgcaggcaaagacagcgaaaaggcgttctctacttttgttgctatgatgcaccaacag
ggtattttaaggtcagatgatttgatcacaagattcttcaggatctgtactgagctgtgt
gttgacgtcacgtaccgtgctatcgctgatcatcccaacaacccaaccctggcccgcagt
aaatgcttcaatactttagatgcttactgtagactcatagctctgttggtcagacattcc
ggtgatgcgtctaacaacgttaccaagatcaacctgttgaacagggttctaagcaccgta
gcaacagtcttgttccaagaccacgagctgcgtcacacagatttccaacagctaccctac
caaaggatcttcatcatgctactgctcgaactcaaccagccagagcctgtccttgaagcc
attaacttccaagtcctccagacgttcagcacggtgttccacgctttgaagccgtcacgt
gcgccagggttcgcgtacgcgtggcttgaactcatctcccacagactgttcatgtctaag
cttcttctcaatacaccacagcagaagggatggtcgttgtttcagcagctgttgattgac
ttgttcaagtttttggctcctttcctgaggaacgctgagctggccaagcagacacacttg
ctttataagggtacattaagagtgttactggtacttctacacgatttcccagaattcctt
tgtgactatcacttcagcttctgtgacgtcattccacccaactgtattcagatgcgtaac
ttgattctaagtgcgttcccaagaaacatgaggctgcctgacccattcacgccaaacctt
aaggttgatttactgactgacatcgctcattctcctcgaattttaaccaactttggagca
gcgatacaaccagctaccttcaagaaggatttggattcgtatctgaagactcgtacgccg
gtaacgttcctgacagagctaagaagtcacttacaggtatccacagaaccaggtacaaga
tacaacgtacccctgatgaatgctttagtcctgtatgttggtactcaagctatagcttac
atacacagtaaaagtggaacgccttctatgtctactataactcactcatcccacatggat
atcttccagaatcttgctgttgatctagacactgaaggacgctacttattcttgaatgcc
atagccaaccagctacgctaccccaacagccacacccattactttagctgtgtcttgttg
tacctgttcgctgaggcgaatacagaggcgatccaggaacagataacaagggttttactt
gagcgtctgatagtgaacagacctcatccatgggggcttctcatcacgttcattgaattg
attaaaaatcaccagtacaagttctggacccatgagtttgttcactgtgctcctgagatt
gaaaagttgtttgagtcagtggctcgtagttgtatgcaacaaaagcaagtaacaagagaa
agcaccagtgaaggacaagagtaa
DBGET
integrated database retrieval system
