Agrobacterium tumefaciens Ach5: Ach5_10800
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Entry
Ach5_10800 CDS
T03816
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00260
Glycine, serine and threonine metabolism
atf00460
Cyanoamino acid metabolism
atf00630
Glyoxylate and dicarboxylate metabolism
atf00670
One carbon pool by folate
atf00680
Methane metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
atf01200
Carbon metabolism
atf01230
Biosynthesis of amino acids
atf01240
Biosynthesis of cofactors
Module
atf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ach5_10800
09102 Energy metabolism
00680 Methane metabolism
Ach5_10800
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ach5_10800
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ach5_10800
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ach5_10800
Enzymes [BR:
atf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ach5_10800
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AKC06857
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Position
circular:1113423..1114712
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AA seq
429 aa
AA seq
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MSNTDAFFSRPLAEVDPDIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYA
EGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGDTF
MGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVERKAKETRPKLILAGGT
AYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPR
GGMILTNDEDLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKDYAAQVVKNAKA
LAETLIEGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPF
VTSGVRLGTPAGTTRGFKEAEFREIGKLIVEVLDGLKVANSDEGNAAVEAAVREKVVGLT
DRFPMYPYM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacagatgctttcttctcccgtccgcttgccgaagtcgatccggatattttc
ggcgcgatcgagaaggaactgggtcgccagcgccacgagatcgaactgatcgcctcggaa
aacatcgtttcccgcgctgtgcttgaagcgcaggggtcgatcatgaccaacaaatatgcc
gaaggttatccgggcaagcgttattacggcggctgccagttcgtagacattgctgaagag
cttgccatcgagcgcgccaagaagctgttcggcgtcaacttcgctaacgtccagccaaat
tccggttcgcagatgaaccaggccgtgttcctcgcgctgctccagccgggcgacaccttc
atgggtctcgacctgaactccggaggccatctgacacacggttcgccggtcaacatgtcc
ggcaagtggttcaacgtcgtgtcttacggcgtgcgcgaaggcgacaacctgctcgacatg
gacgaggtggagcgcaaggccaaggaaacccgaccgaagcttatccttgccggcggcacc
gcctattcccgtatctgggactggaagcgcttccgcgagatcgccgatgaagtcggcgcc
tatctgatggtcgatatggcccacatcgctggtctcgttgccggtggccagcatccgtcg
ccgttcccgcattgccacgttgccaccacgacaacgcacaagtcgttgcgcggcccgcgt
ggcggcatgatcctcaccaatgacgaggatctggccaagaagttcaactccgccgttttc
cccggcctgcagggcggtccgctgatgcacgtcatcgccgcaaaggcagttgccttcggt
gaagctttgcagccggaattcaaggattacgccgcacaggtcgtcaagaacgccaaggcg
cttgccgaaacgctgatcgaaggtggtcttgatgtcgtctccggcggcactgacaaccac
ctgatgctggttgaccttcgcaagaagaacgccaccggcaagcgtgctgaagcagctctc
ggtcgcgcctacgtcacctgcaacaagaacggcattcctttcgatccggaaaagcctttc
gtcacctcgggtgtgcgtctcggcacgccggccggcacgacgcgcggtttcaaggaagcg
gaattccgcgaaatcggcaagctgatcgtcgaggtgctggatggtctgaaggtcgccaat
tcggatgagggcaacgctgccgttgaagctgcggtgcgcgaaaaggtcgtcggcctgact
gaccgtttcccgatgtatccgtacatgtaa
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