Arabidopsis thaliana (thale cress): AT1G09530
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Entry
AT1G09530 CDS
T00041
Symbol
PIF3
Name
(RefSeq) phytochrome interacting factor 3
KO
K12126
phytochrome-interacting factor 3
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
ath04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT1G09530 (PIF3)
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
AT1G09530 (PIF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT1G09530 (PIF3)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT1G09530 (PIF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
837479
NCBI-ProteinID:
NP_001322701
TAIR:
AT1G09530
UniProt:
O80536
A0A5S9TG51
LinkDB
All DBs
Position
1:3075768..3079654
Genome browser
AA seq
524 aa
AA seq
DB search
MPLFELFRLTKAKLESAQDRNPSPPVDEVVELVWENGQISTQSQSSRSRNIPPPQANSSR
AREIGNGSKTTMVDEIPMSVPSLMTGLSQDDDFVPWLNHHPSLDGYCSDFLRDVSSPVTV
NEQESDMAVNQTAFPLFQRRKDGNESAPAASSSQYNGFQSHSLYGSDRARDLPSQQTNPD
RFTQTQEPLITSNKPSLVNFSHFLRPATFAKTTNNNLHDTKEKSPQSPPNVFQTRVLGAK
DSEDKVLNESVASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLDGPSESPSL
SLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRIN
EKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGMGHY
PAAAAAMAMGMGMPYAMGLPDLSRGGSSVNHGPQFQVSGMQQQPVAMGIPRVSGGGIFAG
SSTIGNGSTRDLSGSKDQTTTNNNSNLKPIKRKQGSSDQFCGSS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtttgagcttttcaggctcaccaaagctaagcttgaatctgctcaagacagg
aacccttctccacctgtagatgaagttgtggagctggtgtgggaaaatggtcagatatca
actcaaagtcagtcaagtagatcgaggaacattcctccaccacaagcaaactcttctaga
gctagagagattggaaatggctcaaagacgactatggtggacgagatccctatgtcagtg
ccatcactaatgacgggtttgagtcaagacgatgactttgttccatggttgaatcatcat
ccctcccttgatggatattgctctgatttcttgcgtgatgtgtcgtctcctgttactgtc
aacgagcaagagagtgatatggcggtaaaccaaactgctttcccgttgtttcagagaaga
aaggatggcaatgaatcagctcctgctgcttcttcgtcgcagtataacggtttccaatcg
cattctctgtatggaagtgatagagctagagatcttcctagccaacaaaccaatccggat
cggtttactcagacgcaggaaccactaattactagtaacaagcctagtttggtcaacttt
tcacatttcttacgccctgcaacttttgcgaagactactaataataaccttcatgacact
aaagaaaagagtcctcaaagcccgccaaatgtgtttcagaccagagttcttggagctaaa
gactctgaagataaggttcttaacgagtctgttgcttctgctacgcctaaagataaccaa
aaggcttgcctaatatcagaggactcatgtagaaaagaccaagagagtgaaaaagcagtt
gtatgttcttctgttggctcgggtaatagtctcgatggcccatccgaaagtccttcactt
tctttaaagagaaagcattcgaatattcaagacattgactgtcatagtgaagatgtggaa
gaagaatcaggagatggaagaaaggaagcaggtccatctcgaacgggtttgggttcaaag
agaagccgctctgcagaagtgcataatctgtctgaaaggagacggcgtgataggatcaac
gagaagatgcgtgccctgcaagaactcattccaaactgtaacaaggtggacaaagcttcg
atgctagatgaagccatcgagtatctcaagtcactccaacttcaagtgcagatcatgtca
atggcgtctggttactatctgccaccggcggttatgttcccaccgggtatggggcattac
ccggcagcagctgctgcaatggcaatgggtatgggaatgccttatgcaatgggcttgcct
gatttgagccgtggtggttcatcggttaaccacggaccacagttccaagtctcggggatg
caacaacaaccagtggcgatgggtattccacgtgtctctggtggtggtatctttgccggt
tcttcgacgattggcaatggctcgactagagatttatctggttctaaagatcaaacaacg
acgaataacaacagtaacttgaaaccaataaagagaaaacaggggtcttctgatcagttt
tgtggatcgtcgtga
Arabidopsis thaliana (thale cress): AT2G43010
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Entry
AT2G43010 CDS
T00041
Symbol
PIF4
Name
(RefSeq) phytochrome interacting factor 4
KO
K16189
phytochrome-interacting factor 4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT2G43010 (PIF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT2G43010 (PIF4)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT2G43010 (PIF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
818903
NCBI-ProteinID:
NP_565991
TAIR:
AT2G43010
UniProt:
Q8W2F3
A0A654F1E9
B9DFT8
LinkDB
All DBs
Position
2:17886101..17889087
Genome browser
AA seq
430 aa
AA seq
DB search
MEHQGWSFEENYSLSTNRRSIRPQDELVELLWRDGQVVLQSQTHREQTQTQKQDHHEEAL
RSSTFLEDQETVSWIQYPPDEDPFEPDDFSSHFFSTMDPLQRPTSETVKPKSSPEPPQVM
VKPKACPDPPPQVMPPPKFRLTNSSSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMS
HDRSKNIEEKLNPNASSSSGGSSGCSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSD
AIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAI
DYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQPQQFIRQIQSPVQLPRFPVMDQSAIQ
NNPGLVCQNPVQNQIISDRFARYIGGFPHMQAATQMQPMEMLRFSSPAGQQSQQPSSVPT
KTTDGSRLDH
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccaaggttggagttttgaggagaattatagtttgtccactaatagaagatct
atcaggccacaagatgaactagtggagttattatggcgagatggacaagtggttctgcag
agccaaactcatagagaacaaacccaaacccagaaacaagatcatcatgaagaagcccta
agatccagcacctttcttgaagatcaagaaactgtctcttggatccaataccctccagat
gaagacccattcgaacccgacgacttctcctcccacttcttctcaaccatggatcccctc
cagagaccaacctcagagacggttaagcctaagtccagtcctgaacctcctcaagtcatg
gttaagcctaaggcctgtcctgaccctcctcctcaagtcatgcctcctccaaaatttagg
ttaacaaattcatcatcggggattagggaaacagaaatggaacagtactcggtaacgacc
gttggacctagccattgcggaagcaacccatcacagaacgatctcgatgtctcaatgagt
catgatcgaagcaaaaacatagaagaaaagcttaatccgaacgcaagttcctcatcaggt
ggctcctctggttgcagctttggcaaagatatcaaagaaatggctagtggaagatgcatc
acaaccgaccgtaagagaaaacgtataaatcacactgacgaatctgtatctctatcagat
gcaatcggtaacaagtcgaaccaacgatcaggatcaaaccgaaggagtcgagcagctgaa
gttcataatctctccgaaaggaggaggagagataggatcaatgagagaatgaaggctttg
caagaactaatacctcactgcagtaaaactgataaagcttcgattttagacgaagccata
gattatttgaaatcacttcagttacagcttcaagtgatgtggatggggagtggaatggcg
gcggcggcggcttcggctccgatgatgttccccggagttcaacctcagcagttcatacgt
cagatacagagcccggtacagttacctcgatttccggttatggatcagtctgcaattcag
aacaatcccggtttagtttgccaaaacccggtacaaaaccagatcatctccgaccggttt
gctagatacatcggtgggttcccacacatgcaggccgcgactcagatgcagccgatggag
atgttgagatttagttcaccggcgggacagcaaagtcaacaaccgtcgtctgtgccgacg
aagaccaccgacggttctcgtttggaccactag
Arabidopsis thaliana (thale cress): AT3G59060
Help
Entry
AT3G59060 CDS
T00041
Symbol
PIL6
Name
(RefSeq) phytochrome interacting factor 3-like 6
KO
K16189
phytochrome-interacting factor 4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT3G59060 (PIL6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT3G59060 (PIL6)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT3G59060 (PIL6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Tom22
Motif
Other DBs
NCBI-GeneID:
825075
NCBI-ProteinID:
NP_191465
TAIR:
AT3G59060
UniProt:
Q84LH8
B9DH29
A0A5S9XMU6
LinkDB
All DBs
Position
3:complement(21827905..21830837)
Genome browser
AA seq
444 aa
AA seq
DB search
MEQVFADWNFEDNFHMSTNKRSIRPEDELVELLWRDGQVVLQSQARREPSVQVQTHKQET
LRKPNNIFLDNQETVQKPNYAALDDQETVSWIQYPPDDVIDPFESEFSSHFFSSIDHLGG
PEKPRTIEETVKHEAQAMAPPKFRSSVITVGPSHCGSNQSTNIHQATTLPVSMSDRSKNV
EERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQT
MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAID
YLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQSQMQLSQFPVMNRS
APQNHPGLVCQNPVQLQLQAQNQILSEQLARYMGGIPQMPPAGNQMQTVQQQPADMLGFG
SPAGPQSQLSAPATTDSLHMGKIG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagtgtttgctgattggaattttgaagataattttcacatgtccactaataaa
agatcaatcagaccagaagatgaattagtggagctattgtggagagatggtcaagtggtt
ttacaaagccaagctcgtagagaaccgtcagtccaagtccaaacccacaaacaagaaacc
ctaagaaaacccaacaatatttttcttgacaaccaagaaacagtacaaaagcctaactac
gctgctctagatgatcaagaaaccgtctcctggatacaataccctccggatgacgtcatc
gaccctttcgaatccgagttctcctctcatttcttctcttcgatcgatcacctcggaggt
cctgagaagccacgaacgatcgaagagacagttaagcatgaggctcaagccatggctcct
cctaagtttagatcctcggttataacagtcggaccgagtcattgcggcagcaaccagtca
acaaatattcatcaggccactacacttccggtttctatgagtgatagaagcaagaacgtc
gaagaaagacttgacacttcgtcaggtggctcctccggttgcagctatggaaggaacaac
aaagaaaccgttagtggaacaagtgtaaccattgaccgtaaaagaaaacatgttatggat
gctgatcaagaatctgtgtctcaatcagatataggtttgacctcaaccgatgatcaaacc
atgggtaacaaatcgagccaacggtcaggatctactcgaagaagccgtgcagctgaagtt
cataatctctcagaaaggaggaggagagatcggatcaatgaaagaatgaaagctcttcaa
gaactcatacctcactgcagcagaacagataaagcttcgatattggatgaagcaattgat
tacttaaaatcacttcaaatgcaactccaagtgatgtggatgggaagtggaatggcggcg
gcggcagcagcagcagcaagtccgatgatgtttcccggggtacaatcatctccatacatt
aatcagatggctatgcaaagtcagatgcaattgtctcaattcccggttatgaaccggtcc
gctccgcagaaccatcccggtttagtatgtcaaaacccggtacagttgcagctccaagca
cagaaccaaatcttatcggagcagctcgctaggtacatgggcgggattccccagatgccg
ccggcgggaaatcagatgcagaccgtgcaacaacaaccagcggacatgttgggatttgga
tctccggcgggaccgcaaagtcaactgtcggcaccggcgaccaccgacagtcttcatatg
ggtaaaataggctga
DBGET
integrated database retrieval system