Arabidopsis thaliana (thale cress): AT1G11890
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Entry
AT1G11890 CDS
T00041
Symbol
SEC22
Name
(RefSeq) Synaptobrevin family protein
KO
K08517
vesicle transport protein SEC22
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04130
SNARE interactions in vesicular transport
ath04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
AT1G11890 (SEC22)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
AT1G11890 (SEC22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT1G11890 (SEC22)
Membrane trafficking [BR:
ath04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
AT1G11890 (SEC22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SlyX
Motif
Other DBs
NCBI-GeneID:
837737
NCBI-ProteinID:
NP_172653
TAIR:
AT1G11890
UniProt:
Q94AU2
A0A178WBU4
LinkDB
All DBs
Position
1:4010757..4013104
Genome browser
AA seq
218 aa
AA seq
DB search
MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPY
VFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRI
YADKAKDLNRQALIRKWAPVAIVFGVVFLLFWVKNKLW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatgacattgatagctcgtgttactgatgggttacctctagctgaggggctc
gatgatggacgtgacttaccggattcagatatgtataaacaacaggtcaaagctttgttt
aagaatctgtccagaggtcaaaatgacgcttcaagaatgtccgttgaaactggcccctat
gttttccattacatcatagaaggacgtgtttgctacttgacaatgtgtgaccgctcttac
ccaaagaaactcgctttccaatacctggaagatctcaagaatgaatttgaacgtgtcaat
gggcctaacattgaaacagctgctcggccttatgcctttattaaatttgatacattcata
cagaaaaccaagaaactgtaccaagacactcgtacgcaacgaaacatcgccaagttgaat
gatgaactctatgaggttcatcaaataatgacccggaatgtgcaagaagtcttaggtgtt
ggtgaaaagctggaccaggtgagcgagatgtcgagccggttaacatctgaatctcgtata
tatgctgataaggctaaagatttgaaccgtcaggctttgatccgaaaatgggcaccagtc
gcaattgtgttcggtgtagtcttcctccttttctgggtcaagaacaagctatggtaa
Arabidopsis thaliana (thale cress): AT5G52270
Help
Entry
AT5G52270 CDS
T00041
Name
(RefSeq) SNARE-like superfamily protein
KO
K08517
vesicle transport protein SEC22
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04130
SNARE interactions in vesicular transport
ath04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
AT5G52270
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
AT5G52270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G52270
Membrane trafficking [BR:
ath04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
AT5G52270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
835303
NCBI-ProteinID:
NP_001318788
TAIR:
AT5G52270
UniProt:
F4KG48
LinkDB
All DBs
Position
5:complement(21221432..21222605)
Genome browser
AA seq
224 aa
AA seq
DB search
MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLD
HHSFHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRFG
KIIGRIRKQYIDTRTQANLSKLNALRKQELDVVTEHLNDIIQRQQILEKASSDPPMIVST
IWSSRCLQDISLKWTPVTIIILVILVLFKASLIMTDDYLISTMI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaactaacaatagttggtagggttgaagatggattgcctcttgcacaagatcaa
acctatgtcaaccaagaggacaatactagtttcttgctgtacaagcaacaagcagaattt
cttcttaaacaagtctccaaagactcattattacatccaaagatgaccatcttgctcgat
catcattctttccacttcctggtggagaagaagatatgttacatcgcgctatctgattct
tcatatccaagaaagctattgtttaattacttgcagaatctgaacaaggagcttgataag
ctggacgagaaagcactgatccagaaaatctcaaagccctatagcttcattaggtttggt
aagatcatagggagaataagaaaacaatatatagacacgagaacacaagctaatctatcg
aagctgaatgcattgcggaaacaagaactcgatgtagttactgagcatttgaatgatata
atacaaagacaacaaattttagaaaaggcgtcctcagatcctccaatgattgtttcaacc
atttggagctcacgatgtcttcaggatatttcgttaaaatggacaccagtgacgattatt
attctcgttattcttgttcttttcaaagcaagcttgattatgacagatgattatttaatt
tcaaccatgatatga
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