KEGG   Arabidopsis thaliana (thale cress): AT1G12820
Entry
AT1G12820         CDS       T00041                                 
Symbol
AFB3
Name
(RefSeq) auxin signaling F-box 3
  KO
K27740  protein auxin signaling F-box 2/3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT1G12820 (AFB3)
SSDB
Motif
Pfam: Transp_inhibit F-box_5 LRR_At5g56370 F-box-like LRR_6 F-box LRR_NXF1-5 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 837838
NCBI-ProteinID: NP_563915
TAIR: AT1G12820
UniProt: Q9LPW7 A0A178WFK2
LinkDB
Position
1:complement(4368760..4371298)
AA seq 577 aa
MNYFPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRF
PCLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLL
SRSFANFKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTT
LMSLNFACLKGETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSY
ENEPDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGN
HLIKLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVG
LVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEG
FGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKM
RKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENEN
NGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYVRIL
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgaattatttcccagacgaggttatagagcacgtgtttgacttcgtagcttctcacaaa
gacaggaactcgatatctctggtctgcaaatcatggcacaagatcgagaggtttagtagg
aaggaagtgttcatcggaaactgctacgcgattaacccggagaggttgatcaggaggttt
ccatgtctcaaatccttaactttaaaagggaagcctcattttgcagacttcaacttggtt
cctcatgaatggggaggtttcgtgcatccttggattgaagctttggctagaagccgtgtg
ggacttgaggagctgaggttgaagcggatggttgtaacagatgaaagcttggaccttctt
tcacgttcttttgcaaatttcaagtctttggttcttgttagctgtgaagggtttaccact
gatggcttagcttccattgccgctaattgcaggcatcttcgtgagctggacttgcaagag
aatgagattgatgatcatagaggtcaatggctgaactgttttccagatagctgcactact
cttatgtcgttgaatttcgcttgccttaaaggagagaccaatgttgctgctttagaaagg
cttgttgctaggtcaccaaacctgaagagcttgaagttaaaccgtgcagtaccgcttgac
gcactcgcaaggttaatgagttgtgcgccgcagctagtggacttaggagtagggtcttat
gagaatgagccagatcctgaatcttttgcaaaactcatgactgccattaagaaatacaca
tcgttaaggagcttgtctggctttttagaggttgctccactctgcctcccagcgttctac
ccaatttgccaaaaccttatctctttgaacctcagctatgcagctgaaatccaaggcaac
cacctcattaagcttattcagctttgcaagagacttcaacgattatggatattggatagt
attggtgacaaaggacttgcggttgtcgctgccacatgtaaagagttacaagagcttaga
gtttttccctctgatgtacatggtgaagaagataacaacgcatctgtgactgaggttgga
ctagtcgccatttccgcaggttgccctaaacttcattcgattctgtacttctgcaaacag
atgacaaacgcagcgctcatagccgtggccaaaaactgtccaaacttcatccggttcagg
ctatgcattctcgagccacacaaacctgaccacattacatttcaatcactggacgagggc
tttggtgcaatcgtacaagcttgcaagggtctaagacggctctctgtctccggtctctta
accgatcaagtctttctctacatcggtatgtacgcggaacagctcgagatgctttcgata
gcttttgcgggggacactgacaaaggaatgctctatgtgttgaatggatgcaaaaaaatg
aggaagctggagataagggacagtccttttgggaacgctgcgcttcttgctgacgtgggt
aggtacgaaacaatgcgatccctttggatgtcgtcttgtgaagtaacactcggtggctgc
aagaggctcgcgcagaattcgccacggcttaacgtagagatcatcaacgagaatgagaat
aatgggatggaacagaatgaagaagatgaaagagagaaggttgataaactttacctctac
cgaacagtggttgggactagaaaagatgcaccaccatatgttaggattctttag

KEGG   Arabidopsis thaliana (thale cress): AT3G26810
Entry
AT3G26810         CDS       T00041                                 
Symbol
AFB2
Name
(RefSeq) auxin signaling F-box 2
  KO
K27740  protein auxin signaling F-box 2/3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT3G26810 (AFB2)
SSDB
Motif
Pfam: Transp_inhibit F-box_5 LRR_At5g56370 F-box-like LRR_6 F-box LRR_NXF1-5
Other DBs
NCBI-GeneID: 822296
NCBI-ProteinID: NP_566800
TAIR: AT3G26810
UniProt: Q9LW29 A0A178VGF7
LinkDB
Position
3:9867652..9870782
AA seq 575 aa
MNYFPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRF
PCLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELL
SRSFVNFKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTT
LVTLNFACLEGETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSY
ENDPDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGS
HLIKLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNTAVTEEGLV
AISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFG
AIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKK
LEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNR
MEENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgaattatttcccagatgaagtaatagagcatgtattcgactttgtaacatctcacaaa
gacaggaatgctatatctcttgtatgcaaatcatggtacaagattgaaagatacagtagg
caaaaggttttcattggaaactgttatgccattaatccagagaggttgcttcggagattc
ccatgtctaaagtctttgactttgaaaggaaaacctcattttgcggatttcaatttggtt
cctcatgaatggggaggttttgtgctaccttggattgaggctttggctagaagccgtgta
ggacttgaagagcttaggttgaagaggatggttgttactgatgagagtcttgagctgctt
tctcgttcttttgtcaattttaagtctttggtccttgttagctgtgaaggttttaccact
gatggtcttgcctctattgccgctaattgcaggcatcttcgggatcttgatttgcaagag
aatgaaatcgatgatcatagaggtcaatggttaagttgtttcccagacacttgcacgact
cttgtcacgctaaactttgcgtgcctcgaaggagaaactaatctggttgctctagagagg
cttgttgctaggtctccaaacctaaagagtctgaagctaaatcgtgcagtaccgttagat
gcactcgcaaggttaatggcgtgtgcgccgcagatagttgacttaggagtagggtcttat
gagaatgacccagattccgagtcttacttgaaactcatggctgtcataaagaaatgcacc
tcgttgaggagtttgtcgggttttctagaggctgctcctcactgtctctcagctttccac
ccaatatgtcataacctcacctccttgaatcttagttacgcagctgagattcatggtagc
caccttattaagcttattcagcattgcaagaaacttcagcggttatggattttggatagt
ataggtgacaaagggcttgaagttgtagcttctacatgtaaagagttacaagagcttagg
gtttttccatctgatttactcggtggaggcaacacagctgtgaccgaagaaggtctagtt
gccatctcggcaggctgccctaagctccactctatactctacttctgccaacaaatgaca
aacgcagctctcgtaaccgttgccaagaactgtccaaatttcatccgtttccgactctgc
atcctcgagccaaacaaacccgatcacgtcacatctcaacctctagacgaaggctttgga
gcaatcgtcaaagcctgcaagagcctgagaaggctttctctctcaggtctccttacagac
caagtcttcctctacatcggaatgtacgcgaatcagctcgagatgctctccatagccttt
gcaggagatacagacaaaggcatgctatatgtgttgaatggttgcaaaaagatgaagaaa
ctagagataagggatagtccgtttggggacacggcgcttcttgctgatgtgagcaagtat
gaaacaatgcgatccctttggatgtcttcatgtgaagtcacactcagtggatgcaaaagg
ctcgcagagaaagcgccatggctcaatgtagagatcataaacgagaatgataataaccgg
atggaagaaaacggacacgaggggaggcagaaagtggataagttgtatctgtaccggact
gtggttgggacaagaatggatgcgccgccatttgtgtggattctctaa

KEGG   Arabidopsis thaliana (thale cress): AT3G62980
Entry
AT3G62980         CDS       T00041                                 
Symbol
TIR1
Name
(RefSeq) F-box/RNI-like superfamily protein
  KO
K14485  transport inhibitor response 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT3G62980 (TIR1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT3G62980 (TIR1)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     AT3G62980 (TIR1)
SSDB
Motif
Pfam: Transp_inhibit F-box_5 LRR_At5g56370 F-box-like LRR_4 F-box LRR_NXF1-5 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 825473
NCBI-ProteinID: NP_567135
TAIR: AT3G62980
UniProt: Q570C0 A0A178VA54
Structure
LinkDB
Position
3:complement(23273065..23276630)
AA seq 594 aa
MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPAT
VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDD
CLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP
DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEEL
GTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYAT
VQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT
EQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL
DIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGC
DSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDE
RGAPDSRPESCPVERVFIYRTVAGPRFDMPGFVWNMDQDSTMRFSRQIITTNGL
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcagaagcgaatagccttgtcgtttccagaagaggtactagagcatgtgttctcgttt
attcagctggataaggataggaactcagtctctctggtgtgcaagtcatggtacgagatc
gagcggtggtgcaggaggaaagtcttcatcgggaactgctacgccgtgagtccagcgacg
gtgattaggaggttcccgaaagtgagatccgtggagcttaaaggaaaacctcactttgct
gactttaatttggtacctgacggatggggaggttacgtgtatccatggattgaggccatg
tcttcgtcttacacgtggcttgaagagataaggctgaagaggatggtggtcaccgacgat
tgcttggagctcatagccaagtcttttaagaattttaaggttcttgtgctttcttcctgc
gaaggcttctccaccgatggtctcgctgctatcgctgccacttgcaggaatctgaaagag
cttgacttacgagagagtgatgttgacgacgttagtggccactggcttagccatttccca
gatacatacacttctttggtatcactcaatatatcttgcttagcatctgaggtcagtttc
tctgctctggaaaggctggtgactaggtgtcccaatctcaagtctctcaagcttaaccga
gctgttccacttgaaaaattggctactttacttcaaagagcacctcaattggaggaattg
ggcactggtgggtacactgcagaagtgcgaccagatgtttactctggtttatctgtagcg
ctctctgggtgcaaggaattgaggtgcttatctggattttgggatgctgttcctgcctat
cttccagcagtttattcggtttgcagtcggcttacaactttgaatctgagttatgcaaca
gtccagagctatgatcttgtcaagcttctttgtcaatgccctaaactgcagcgcctctgg
gtgcttgactacatcgaggatgctggtcttgaggtgcttgcttcaacctgcaaggaccta
cgcgagctgagagtgtttccgtccgagccttttgtcatggaaccaaatgtggcattgacg
gaacaggggcttgtctccgtctccatgggctgtccaaaactcgagtcggttctctacttc
tgccgtcaaatgaccaatgctgcattgataaccattgctaggaaccgtcccaacatgact
cgcttccgtttgtgcatcattgagccaaaagccccagactatctgactctagagccactg
gatattggatttggagccatagtagagcactgcaaggatctccgtcgcctctctctatct
ggcctcttgaccgacaaggtttttgaatacattgggacatatgccaagaagatggaaatg
ctctcagtggcatttgcaggagacagtgacttaggcatgcatcatgttttgtccgggtgc
gatagcttgaggaaactagagataagggactgcccgtttggagacaaggcgcttttggcc
aatgcttcaaagctggagacaatgcgatccctttggatgtcttcttgttccgtgagtttt
ggagcctgcaagttactaggacagaagatgccaaagctgaatgtggaagtcatcgatgaa
cggggtgcaccggactcgagaccagagagctgccctgttgagagagtcttcatataccga
acagtggctggtcctcgatttgacatgcctggcttcgtctggaacatggaccaagactca
acaatgaggttttccaggcaaatcattactactaacggattataa

KEGG   Arabidopsis thaliana (thale cress): AT4G03190
Entry
AT4G03190         CDS       T00041                                 
Symbol
GRH1
Name
(RefSeq) GRR1-like protein 1
  KO
K27741  GRR1-like protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT4G03190 (GRH1)
SSDB
Motif
Pfam: Transp_inhibit F-box_5 LRR_At5g56370 F-box-like F-box
Other DBs
NCBI-GeneID: 828045
NCBI-ProteinID: NP_567255
TAIR: AT4G03190
UniProt: Q9ZR12 A0A178UXT3
LinkDB
Position
4:complement(1404887..1407402)
AA seq 585 aa
MGLRFPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRR
FPEMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEK
IAASFKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESST
SLVSLDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGS
FAAQLKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMP
DLVELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGL
VFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGF
KAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLK
KLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEHPPE
SRPESSPVERIYIYRTVAGPRMDTPEFVWTIHKNPENGVSHLAIK
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgggtctccgattcccacctaaggtgttggaacatatcctctccttcattgattccaac
gaggaccggaactctgtttctctggtctgcaagtcatggtttgagacagaacggaagact
aggaagcgagtctttgtcggaaactgttacgcggtcagtcctgctgcggttacacgacgg
ttcccggagatgagatctttgactttgaaggggaagccacacttcgctgactataatctc
gttcctgatggttggggtggttatgcttggccgtggattgaagctatggcggcgaaaagt
tcgtctcttgaagagatcagaatgaagaggatggtggtgactgatgagtgcttagagaaa
attgctgcttcgtttaaggattttaaagtccttgtgttgacttcttgtgaaggtttctct
actgatggtatcgctgctattgcagctacttgcaggaacttgagagtgttggaactacga
gagtgtattgttgaagatttaggaggagattggcttagctattttccagagagttcaact
tctttggtctctcttgacttctcttgtttagattctgaggttaaaatctcggatttagag
cgtcttgtgagcagatctccaaacttgaagtctttgaagttgaatccagctgtgactcta
gatggactcgttagcttacttcgttgtgctccacaactgactgagctcggcacaggttct
ttcgcagctcaattgaaacctgaagcgttttcaaagttatcagaagctttttcaaactgt
aagcaacttcagagcttatctggtctctgggatgtcctccctgaatatcttccagctctt
tattctgtctgtcctggtcttacctcgttgaacttgagctacgctactgtccgaatgcct
gatcttgttgagcttcttaggcgatgctcgaaactgcagaagctatgggtgatggacttg
attgaggacaaaggtcttgaagctgttgcctcatattgcaaggaactgcgagaactgagg
gtgtttccatctgagccagatcttgatgcaaccaacatacctctgacggaacaaggcctg
gtctttgtgtctaaaggctgtcgaaagcttgagtctgttctctacttctgtgtccagttc
acaaacgcagctttgtttaccatagcaagaaaacgtccgaatctcaagtgcttccgtctc
tgtgtgatagagccatttgctcctgattacaaaacaaatgagccacttgataaaggattc
aaagccatagctgagggatgcagggatcttcgacggctctccgtctctggtcttctctct
gacaaggccttcaaatacattgggaaacatgccaagaaggttaggatgctatcaatagca
tttgctggggacagtgatttgatgcttcatcacttgttgtcgggctgtgagagtttaaag
aagcttgagatacgagactgcccttttggagacactgcactactggagcacgctgccaag
ctagagaccatgcgatccctttggatgtcatcttgctttgtaagttttggtgcttgcaag
cttctaagtcagaaaatgccaaggctcaatgtcgaagtcattgatgaacatcctccagag
tcaagacctgagagctctccagttgagaggatatacatatacagaacagtcgcaggaccg
agaatggatacgcctgaatttgtgtggacgatacacaagaatcctgagaatggagtttca
catctagccataaagtaa

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