Arabidopsis thaliana (thale cress): AT1G64350
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Entry
AT1G64350 CDS
T00041
Symbol
SEH1H
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K14299
nucleoporin SEH1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G64350 (SEH1H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G64350 (SEH1H)
04131 Membrane trafficking [BR:
ath04131
]
AT1G64350 (SEH1H)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT1G64350 (SEH1H)
Membrane trafficking [BR:
ath04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
AT1G64350 (SEH1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
842741
NCBI-ProteinID:
NP_564830
TAIR:
AT1G64350
UniProt:
Q93VR9
A0A178WA50
LinkDB
All DBs
Position
1:23881512..23883354
Genome browser
AA seq
326 aa
AA seq
DB search
MAKSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIV
KIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVSRK
SLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKG
EEQEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNIGR
PYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGS
DGMVKLWQSNLNGEWHEQATLEPVPS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcaatggcgacgctagattctggcaccacatgttcctcctggaatcaatcc
ggcgaccgtttagccgccggatctctcaacggaaaactttctatatacgaatcctctact
tcgtcttcttcgactttcagttgcacttccaaagttagggttagtgaatcgagtatcgta
aagatcgtttggttgccttcagagtacggcgacgcagtagcctgcgtttgcgaagacggg
agcttatcgatttgggaggagctctctgaagacgcacatggtcttgaatggaaattgtgt
aagagtatgaagaataagtctagccaagtgctcgatgttcaatttggagtttccagaaag
agtctaaagatggttgctgcatattctgatgggtaccttagggtttttgagctcttgaat
ccattggagctaaagaattggcaacttcaggctgagtttcagaatgttatcgattctcta
tcgacgctcggtaaaccttcaagcttatctgcttctgtttcttggaatccgatgaaaggt
gaagagcaagaaccaagctttgttttagccttcaactctgactctccacatcttaactct
tccaagatttgggagtttgatgaagctcataacagatggttggcagtagcagaattagcc
ttaccagaagacaaaggtgatccagtttatgctttgtcatgggctccgaatattggccga
ccatacgaggttgttgccgttgcaactcataaaggcataggaatatggcatgttggtcta
gctcctgatcttgaaggaaggcttccagtaaagaaggtctcctcgctttctggccatcaa
ggcgaggtttggcaaatggaatgggacatgagtggcatgactttagctagcactggaagt
gatggaatggtcaaattgtggcagtcaaacttaaacggtgagtggcatgagcaggccacg
cttgaaccagttccctcctaa
DBGET
integrated database retrieval system
