Arabidopsis thaliana (thale cress): AT2G22040
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Entry
AT2G22040 CDS
T00041
Symbol
LST8-2
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
AT2G22040 (LST8-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT2G22040 (LST8-2)
Membrane trafficking [BR:
ath04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
AT2G22040 (LST8-2)
mTORC2 complex
AT2G22040 (LST8-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
eIF2A
CPSF_A
VID27
Motif
Other DBs
NCBI-GeneID:
816739
NCBI-ProteinID:
NP_179795
TAIR:
AT2G22040
UniProt:
F4IIK6
A0A654F035
LinkDB
All DBs
Position
2:complement(9374438..9376260)
Genome browser
AA seq
313 aa
AA seq
DB search
MFENKPDDSPVYLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACN
PHIRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQR
EFRSVSPVNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDG
TMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNNRYLATASSDK
TVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQA
HRKATVCCTLLRD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacaaaccggatgatagtcccgtgtatctcgcaacagcaagccatgatcaa
accatccgattatggcaagcccgaaccggtcgctgttacttttcctttcgctatcctgat
ttgcatgtgaataggcttgagctaacccctgaaaagggtaaactagtagcagcttgcaat
cctcacatacgactctttgatctcagatcctacaaccctcatatacctgtgaggaatttt
gtatcacacaccaaaaatgttatggcggtaggattccaatatactggacacatgatgtat
tcagggtcagaagatggctctgttaagatctgggacttgagggttcgagaatgccaaagg
gagtttagaagtgtttcaccagttaacacagttgttttacacccaaatcagactgaattg
atatctggagaccaaaacggtaatatacgtgtatgggatctcagagcagatttgtgtagc
tgtgaactggtaccagaagtcggtacacctatacggtctttaacggttatgtgggatggg
acaatggtggttgctgctaacgaccgtggaacatgttatgtatggcgctccttgtgtgaa
agacaaacgatgaccgagtttgagccccttcataagctacaagctcataatagccacatc
cttaaatgtctcctttctcctggaaacaacagatatctagcgaccgcatcatctgataaa
acagtcaaaatatggaaccttgatggtttcaaacttgagaaagttttaacaggtcatgaa
agatgggtatgggactgtgacttctcaatggatggagaatatcttgtaacagcatcatcg
gacaccacggctagattgtggtcgatgcgagcgggaaaagaagagatggtgtaccaagct
catcgcaaagctactgtgtgttgtacactactgcgtgattaa
Arabidopsis thaliana (thale cress): AT3G18140
Help
Entry
AT3G18140 CDS
T00041
Symbol
LST8-1
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K08266
target of rapamycin complex subunit LST8
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
AT3G18140 (LST8-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G18140 (LST8-1)
Membrane trafficking [BR:
ath04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
AT3G18140 (LST8-1)
mTORC2 complex
AT3G18140 (LST8-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
PROPPIN
Ge1_WD40
eIF2A
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
821339
NCBI-ProteinID:
NP_188442
TAIR:
AT3G18140
UniProt:
Q9LV27
A0A178VME6
LinkDB
All DBs
Position
3:complement(6212585..6214804)
Genome browser
AA seq
305 aa
AA seq
DB search
MSQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRL
FDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA
AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAA
NNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV
DGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC
CALHD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagccttctgtgattcttgctacggctagctatgatcacaccatccgattctgg
gaagccgaaactggtcgctgttaccgtaccattcagtatcctgattcgcatgtaaatagg
cttgagataaccccagataagcattatctagctgcagcttgcaatcctcatattcgactc
tttgatgtcaattccaatagtcctcaacctgtgatgacttacgattcacacaccaacaat
gttatggcagtaggatttcaatgtgatgcaaaatggatgtattcaggatcagaagatggc
acagttaagatctgggacttaagggctccgggttgccaaaaggagtatgaaagtgttgca
gcggttaatacagttgttttacacccaaatcagactgaattgatatctggagaccaaaat
ggaaatatacgtgtatgggatctcagagcaaattcgtgtagctgtgaactggtaccagaa
gttgatacagctgtacggtctttaactgttatgtgggatgggacaatggtagtcgctgct
aacaaccgtggaacatgttatgtatggcgcttgttgcgtggaaaacagacaatgacagag
tttgagccccttcataagctgcaagctcataatggccacatccttaaatgtctcctctct
cctgcaaacaaatatctagcgactgcatcatctgataaaactgtcaaaatatggaacgtc
gatggttttaaactagagaaagttttaacaggacatcaaagatgggtttgggactgcgtc
ttctcagtggatggagaatttcttgtaacagcatcatcggacatgacggctagattgtgg
tcgatgccagcaggcaaagaagtgaaagtgtaccaaggtcatcacaaagccactgtgtgc
tgtgcacttcacgattaa
DBGET
integrated database retrieval system
