Arabidopsis thaliana (thale cress): AT2G28830
Help
Entry
AT2G28830 CDS
T00041
Symbol
PUB12
Name
(RefSeq) armadillo/beta-catenin repeat protein
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT2G28830 (PUB12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT2G28830 (PUB12)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT2G28830 (PUB12)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
U-box type E3
AT2G28830 (PUB12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
zf-RING_UBOX
Neurochondrin
zf-Nse
zf-C3HC4_4
KAP
zf-C3HC4
HTH_Tnp_IS1
Arm_2
Motif
Other DBs
NCBI-GeneID:
817432
NCBI-ProteinID:
NP_001318308
TAIR:
AT2G28830
UniProt:
Q9ZV31
LinkDB
All DBs
Position
2:complement(12368220..12370420)
Genome browser
AA seq
582 aa
AA seq
DB search
MLRICFLSLAMLAKFTWCVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVEL
VLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITDLTQES
LALLDMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLKSSLPKSRDDDRD
MLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPN
YVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDR
RSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENK
GKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSE
GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSH
PDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIE
MAENGTDRGKRKAAQLLNRFSRFNDQQKQHSGLGLEDQISLI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggatttgctttctttcgttagccatgttagcaaaatttacctggtgtgtgttg
gagagagatcaagtgatggtgaaatttcagaaagtgacttctctattggaacaagcttta
agtataatcccttatgagaatctggaaatttcagatgaacttaaagaacaggtggagctt
gttttagttcagttaagaagatcgttaggaaaacgcggtggcgatgtgtatgatgatgag
ttgtataaggatgttctatctctttatagtggtagaggtagtgtaatggagtctgatatg
gttaggagagtggcggagaagcttcagttgatgactataactgaccttacgcaagagtca
ttggctttacttgacatggttagttctagtggtggtgatgatcctggtgaaagttttgag
aagatgtctatggttcttaagaagattaaggactttgtgcaaacttataatcctaacttg
gatgatgctccattgagactgaaatcatcgcttccgaagtcgcgagatgatgatcgagat
atgctaattccgcctgaagagttccgttgtccaatatctctagaattgatgactgatcca
gttattgtttcttcagggcagacttatgaacgtgagtgcattaagaagtggcttgaagga
ggacacttgacgtgtccaaagacgcaagaaacgctgacaagcgatatcatgacaccaaac
tatgttctaagaagccttatagctcaatggtgtgagtccaatggcatcgaacctccaaag
cgtcccaacatatctcaaccgagtagtaaggcctcatcttcgtcgtcagcccctgatgat
gaacataacaagattgaagaacttctacttaagctcacatcgcaacagcctgaagaccga
agatctgctgcaggagaaatccgtcttctagcaaaacaaaacaatcataaccgagtcgcc
attgctgcctcaggcgcgatccctcttctggtgaatctcctcacgatatctaatgactct
cggactcaagaacacgctgtgacatcgattcttaacctctcgatatgtcaagagaacaaa
gggaagattgtttattcatctggagcagttccaggtattgttcatgtgcttcagaaaggt
agcatggaagctagagaaaacgcagcagctacacttttcagcctctcggttatagacgag
aacaaagtgacaataggtgccgcaggagcgatcccgcctcttgtgaccttgctgagcgaa
ggatcacagagaggcaaaaaagacgcggcaactgctctgtttaatctctgcatatttcaa
ggaaacaaaggaaaagctgtgagagccggtttagttcccgtgctaatgaggttactaaca
gaacccgaaagcggaatggttgatgaatcactctcgatattagccatactatcgagtcat
ccggacgggaaatcagaggttggagccgctgatgcagttccagttctggtagattttata
agaagcgggtcaccgcggaacaaagaaaactcagctgcggtattagtgcacttgtgttca
tggaatcagcaacatttgattgaagctcagaaattagggattatggatcttttaatagaa
atggctgagaatggtactgacagaggaaaacgcaaagcggcacagttacttaaccgcttt
agccgttttaacgaccagcagaaacaacactctggtttaggtttggaagatcaaatctcc
ctaatctga
Arabidopsis thaliana (thale cress): AT3G46510
Help
Entry
AT3G46510 CDS
T00041
Symbol
PUB13
Name
(RefSeq) plant U-box 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT3G46510 (PUB13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G46510 (PUB13)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G46510 (PUB13)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
U-box type E3
AT3G46510 (PUB13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Neurochondrin
MCAfunc
zf-RING_UBOX
KAP
zf-Nse
HEAT_EZ
MLKL_N
zf-C3HC4_4
Arm_2
zf-C3HC4
zf-C3HC4_2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
823804
NCBI-ProteinID:
NP_190235
TAIR:
AT3G46510
UniProt:
Q9SNC6
A0A654FE93
LinkDB
All DBs
Position
3:complement(17123731..17126897)
Genome browser
AA seq
660 aa
AA seq
DB search
MEEEKASAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISED
TLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEEL
DISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNKSSDVDAYQPVLERVAKKLH
LMEIPDLAQESVALHEMVASSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR
SNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKT
QQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWR
LAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLN
LSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPP
LVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAI
LAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLG
LMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAVSQPEEEAEPTHPESTTEAADT
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagaaagcttctgctgcacagagcttaatcgatgtagttaacgagattgct
gcgatttctgattatcgtataacagtgaagaagctttgttataatctagcgaggagatta
aagctgcttgttcctatgtttgaggaaattagagaaagtaacgaaccgatcagcgaagat
acgttgaagactttgatgaatttgaaggaagctatgtgttcagcgaaggattatctcaaa
ttttgtagccaagggagcaagatttatctggtgatggagagggaacaagtgacaagtaaa
ttgatggaggtgtctgttaagttagaacaatctttaagccagattccatatgaagaactc
gatatatcggatgaagttagagaacaggttgagctggttcttagtcagtttcggcgagct
aaaggaagagtagatgtatcagatgatgagctatatgaagatcttcagtcgctttgcaac
aaaagtagtgatgtagatgcttatcagcctgtgctagagcgggttgcgaagaagttacat
ttgatggagattcctgacctagctcaagaatcagtggctctgcatgaaatggttgcttca
agcggtggagatgttggtgaaaatattgaggagatggcaatggtattaaagatgattaag
gattttgtgcagacggaggatgataatggcgaggagcagaaagtaggagttaactctaga
agcaatggacagacttctacggcagcgagtcagaagatacctgtgattcctgatgatttt
cgctgtccgatttcgctggaaatgatgagagatccagttattgtttcatcagggcagaca
tacgaacgcacatgtattgagaaatggatagaaggtggacactcgacatgtccaaaaaca
cagcaggcgctaacaagcacaaccctcacaccaaactatgttctccgtagtctcatagct
cagtggtgcgaggccaacgatattgagcctccaaagcctccgagcagtttaagacccaga
aaagtatcgtccttctcatctcccgcagaagcgaacaagattgaagatcttatgtggaga
cttgcgtacggaaaccccgaggaccaacgatctgcagctggggaaatccgccttcttgca
aaacgaaatgcagacaaccgcgtggccatagccgaagctggagccatacctcttctcgta
ggtctcctctcaactcctgattctcgtattcaagaacattcggtaacagctcttctaaac
ctctccatatgtgagaacaacaaaggagccattgtttcagctggagctattcctggtata
gttcaagtgcttaagaaaggaagcatggaggccagagagaatgcggcggctacacttttc
agtctatcagtgatcgatgaaaataaagtgactatcggtgccttaggagcaattccgcca
ctcgttgtattacttaatgaaggtacacaaagaggcaagaaagatgctgctactgcactc
tttaacctctgtatataccaaggaaacaaaggaaaagctatacgtgcaggagtgattccc
acgttgactagactcttgacagagcccggaagcggaatggtcgatgaggcactcgcgatt
ttggcgattctctctagccaccccgaaggaaaagcaatcataggatcctctgatgcagtc
ccaagtttggttgagtttatcagaactggctcgcctagaaacagagaaaacgcagctgct
gttctagtccacctctgttctggagacccacaacatcttgtcgaagcgcagaaactcggc
cttatgggtccattgatagatttagctggaaatgggacggatagagggaaacgaaaagca
gcgcagttgcttgaacgcatcagccgtctcgctgaacagcagaaggaaacggctgtgtca
caaccggaagaagaagctgaaccaacacatccagaatccaccacagaagctgcagatact
taa
Arabidopsis thaliana (thale cress): AT3G54850
Help
Entry
AT3G54850 CDS
T00041
Symbol
PUB14
Name
(RefSeq) plant U-box 14
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT3G54850 (PUB14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G54850 (PUB14)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT3G54850 (PUB14)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
U-box type E3
AT3G54850 (PUB14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-Nse
KAP
zf-RING_UBOX
Arm_2
zf-C3HC4_4
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
824650
NCBI-ProteinID:
NP_191045
TAIR:
AT3G54850
UniProt:
Q8VZ40
A0A178V9F4
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:20321353..20324020
Genome browser
AA seq
632 aa
AA seq
DB search
MGLTNCCSHEELMSRLVDSVKEISGFSSSRGFIGKIQGDLVRRITLLSPFFEELIDVNVE
LKKDQITGFEAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIP
YEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDLAMAENVMDPDPIILKRLSQEL
QLTTIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFVTMESSDPDPSTGSRIV
SRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG
LTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTE
QQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGN
KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEE
GTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTN
QEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKE
LTENGTDRAKRKAASLLELIQQTEGVAVTTVP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgggattaacgaattgttgttcccacgaggagctaatgagtcgactcgttgactccgtt
aaagaaatatcagggttttcatcttcaaggggttttattgggaagatccaaggcgatctt
gttcgtaggatcacgcttctcagccctttcttcgaggaattgattgacgtcaatgttgaa
ttgaaaaaggatcagattacagggtttgaggctatgagaatcgctcttgattcaagtctt
gagctttttcgatcggttaatggaggaagcaagctttttcagcttttcgatagagattct
cttgtggagaagttccgtgacatgacagtggagatagaagcagcgttaagtcagattcct
tatgagaagattgaggtatcagaggaagtcagagaacaggttcagcttctgcattttcag
ttcaagagagcaaaagaaagatgggaggagtctgatctacagcttagccatgatctagct
atggcagagaatgtgatggatcctgaccctataatcctcaaaagactttcacaagagctc
caacttactaccattgatgagctgaagaaagaatcgcatgcgatacatgagtattttctt
tcatatgatggagatcctgatgactgtttcgagaggatgtcttcacttcttaaaaacctg
gtagactttgtaacaatggaaagttcagaccctgatccatccactggcagcagaatcgtt
tcgagacatcgttctcctgttataccagagtattttcggtgtccgatatcacttgaactg
atgaaggatcctgttatcgtctccactggacagacatatgaaagatcatcaattcagaag
tggcttgatgctggtcataaaacatgtccgaaatctcaggagacacttttacatgctgga
ttaacccctaattatgtgttaaagagtctcattgctttgtggtgtgaaagcaacggcatt
gagctaccgcaaaatcaagggagctgtagaaccacaaaaataggaggaagcagctcttca
gattgtgatcgaacatttgtcctttccttgttagagaaattggccaacggtactacagaa
cagcaaagagctgcagctggagaattaaggttactagccaagaggaacgtggataacaga
gtttgtatcgctgaggctggagccataccactccttgtagagcttctatcctcaccagat
cctcggactcaggaacattctgtgacagctcttctgaatctttccataaatgaagggaac
aaaggagccattgttgatgcaggagccataacggatatagtagaagtcctaaagaacgga
agcatggaagctagagagaacgctgctgcaacccttttcagtttatctgttatagatgaa
aacaaagtggcaataggtgctgctggagctatccaagcacttataagcttgcttgaggaa
ggaacccgaagaggcaaaaaagatgctgctacagcgattttcaacttatgcatataccag
gggaacaaatcaagggcggttaaaggcggtattgttgaccctctgaccagattactgaaa
gatgcaggtggcggaatggtggatgaggctctggccattttagcaattctttcaactaac
caagaagggaaaacagcgatagctgaagcagaatctatcccggttttggttgagattata
aggacagggtcaccaaggaaccgggaaaatgctgcagcaatactttggtatctatgtatt
gggaatatagaaaggctaaatgtagcaagagaggttggtgcagatgtggccttgaaggaa
cttactgagaatggcactgatagagcaaagaggaaagctgcgagcttgttggagcttatt
cagcaaaccgaaggtgttgcagtaactactgttccatga
DBGET
integrated database retrieval system