KEGG   Arabidopsis thaliana (thale cress): AT2G28830
Entry
AT2G28830         CDS       T00041                                 
Symbol
PUB12
Name
(RefSeq) armadillo/beta-catenin repeat protein
  KO
K27628  U-box domain-containing protein 12/13/14 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT2G28830 (PUB12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT2G28830 (PUB12)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT2G28830 (PUB12)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  U-box type E3
   AT2G28830 (PUB12)
SSDB
Motif
Pfam: Arm U-box ARM_ARMC5 zf-RING_UBOX Neurochondrin zf-Nse zf-C3HC4_4 KAP zf-C3HC4 HTH_Tnp_IS1 Arm_2
Other DBs
NCBI-GeneID: 817432
NCBI-ProteinID: NP_001318308
TAIR: AT2G28830
UniProt: Q9ZV31
LinkDB
Position
2:complement(12368220..12370420)
AA seq 582 aa
MLRICFLSLAMLAKFTWCVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVEL
VLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITDLTQES
LALLDMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLKSSLPKSRDDDRD
MLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPN
YVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDR
RSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENK
GKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSE
GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSH
PDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIE
MAENGTDRGKRKAAQLLNRFSRFNDQQKQHSGLGLEDQISLI
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgctaaggatttgctttctttcgttagccatgttagcaaaatttacctggtgtgtgttg
gagagagatcaagtgatggtgaaatttcagaaagtgacttctctattggaacaagcttta
agtataatcccttatgagaatctggaaatttcagatgaacttaaagaacaggtggagctt
gttttagttcagttaagaagatcgttaggaaaacgcggtggcgatgtgtatgatgatgag
ttgtataaggatgttctatctctttatagtggtagaggtagtgtaatggagtctgatatg
gttaggagagtggcggagaagcttcagttgatgactataactgaccttacgcaagagtca
ttggctttacttgacatggttagttctagtggtggtgatgatcctggtgaaagttttgag
aagatgtctatggttcttaagaagattaaggactttgtgcaaacttataatcctaacttg
gatgatgctccattgagactgaaatcatcgcttccgaagtcgcgagatgatgatcgagat
atgctaattccgcctgaagagttccgttgtccaatatctctagaattgatgactgatcca
gttattgtttcttcagggcagacttatgaacgtgagtgcattaagaagtggcttgaagga
ggacacttgacgtgtccaaagacgcaagaaacgctgacaagcgatatcatgacaccaaac
tatgttctaagaagccttatagctcaatggtgtgagtccaatggcatcgaacctccaaag
cgtcccaacatatctcaaccgagtagtaaggcctcatcttcgtcgtcagcccctgatgat
gaacataacaagattgaagaacttctacttaagctcacatcgcaacagcctgaagaccga
agatctgctgcaggagaaatccgtcttctagcaaaacaaaacaatcataaccgagtcgcc
attgctgcctcaggcgcgatccctcttctggtgaatctcctcacgatatctaatgactct
cggactcaagaacacgctgtgacatcgattcttaacctctcgatatgtcaagagaacaaa
gggaagattgtttattcatctggagcagttccaggtattgttcatgtgcttcagaaaggt
agcatggaagctagagaaaacgcagcagctacacttttcagcctctcggttatagacgag
aacaaagtgacaataggtgccgcaggagcgatcccgcctcttgtgaccttgctgagcgaa
ggatcacagagaggcaaaaaagacgcggcaactgctctgtttaatctctgcatatttcaa
ggaaacaaaggaaaagctgtgagagccggtttagttcccgtgctaatgaggttactaaca
gaacccgaaagcggaatggttgatgaatcactctcgatattagccatactatcgagtcat
ccggacgggaaatcagaggttggagccgctgatgcagttccagttctggtagattttata
agaagcgggtcaccgcggaacaaagaaaactcagctgcggtattagtgcacttgtgttca
tggaatcagcaacatttgattgaagctcagaaattagggattatggatcttttaatagaa
atggctgagaatggtactgacagaggaaaacgcaaagcggcacagttacttaaccgcttt
agccgttttaacgaccagcagaaacaacactctggtttaggtttggaagatcaaatctcc
ctaatctga

KEGG   Arabidopsis thaliana (thale cress): AT3G46510
Entry
AT3G46510         CDS       T00041                                 
Symbol
PUB13
Name
(RefSeq) plant U-box 13
  KO
K27628  U-box domain-containing protein 12/13/14 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT3G46510 (PUB13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT3G46510 (PUB13)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT3G46510 (PUB13)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  U-box type E3
   AT3G46510 (PUB13)
SSDB
Motif
Pfam: Arm U-box ARM_ARMC5 HEAT_2 Neurochondrin MCAfunc zf-RING_UBOX KAP zf-Nse HEAT_EZ MLKL_N zf-C3HC4_4 Arm_2 zf-C3HC4 zf-C3HC4_2 zf-NOSIP
Other DBs
NCBI-GeneID: 823804
NCBI-ProteinID: NP_190235
TAIR: AT3G46510
UniProt: Q9SNC6 A0A654FE93
LinkDB
Position
3:complement(17123731..17126897)
AA seq 660 aa
MEEEKASAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISED
TLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEEL
DISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNKSSDVDAYQPVLERVAKKLH
LMEIPDLAQESVALHEMVASSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR
SNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKT
QQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWR
LAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLN
LSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPP
LVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAI
LAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLG
LMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAVSQPEEEAEPTHPESTTEAADT
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggaggaagagaaagcttctgctgcacagagcttaatcgatgtagttaacgagattgct
gcgatttctgattatcgtataacagtgaagaagctttgttataatctagcgaggagatta
aagctgcttgttcctatgtttgaggaaattagagaaagtaacgaaccgatcagcgaagat
acgttgaagactttgatgaatttgaaggaagctatgtgttcagcgaaggattatctcaaa
ttttgtagccaagggagcaagatttatctggtgatggagagggaacaagtgacaagtaaa
ttgatggaggtgtctgttaagttagaacaatctttaagccagattccatatgaagaactc
gatatatcggatgaagttagagaacaggttgagctggttcttagtcagtttcggcgagct
aaaggaagagtagatgtatcagatgatgagctatatgaagatcttcagtcgctttgcaac
aaaagtagtgatgtagatgcttatcagcctgtgctagagcgggttgcgaagaagttacat
ttgatggagattcctgacctagctcaagaatcagtggctctgcatgaaatggttgcttca
agcggtggagatgttggtgaaaatattgaggagatggcaatggtattaaagatgattaag
gattttgtgcagacggaggatgataatggcgaggagcagaaagtaggagttaactctaga
agcaatggacagacttctacggcagcgagtcagaagatacctgtgattcctgatgatttt
cgctgtccgatttcgctggaaatgatgagagatccagttattgtttcatcagggcagaca
tacgaacgcacatgtattgagaaatggatagaaggtggacactcgacatgtccaaaaaca
cagcaggcgctaacaagcacaaccctcacaccaaactatgttctccgtagtctcatagct
cagtggtgcgaggccaacgatattgagcctccaaagcctccgagcagtttaagacccaga
aaagtatcgtccttctcatctcccgcagaagcgaacaagattgaagatcttatgtggaga
cttgcgtacggaaaccccgaggaccaacgatctgcagctggggaaatccgccttcttgca
aaacgaaatgcagacaaccgcgtggccatagccgaagctggagccatacctcttctcgta
ggtctcctctcaactcctgattctcgtattcaagaacattcggtaacagctcttctaaac
ctctccatatgtgagaacaacaaaggagccattgtttcagctggagctattcctggtata
gttcaagtgcttaagaaaggaagcatggaggccagagagaatgcggcggctacacttttc
agtctatcagtgatcgatgaaaataaagtgactatcggtgccttaggagcaattccgcca
ctcgttgtattacttaatgaaggtacacaaagaggcaagaaagatgctgctactgcactc
tttaacctctgtatataccaaggaaacaaaggaaaagctatacgtgcaggagtgattccc
acgttgactagactcttgacagagcccggaagcggaatggtcgatgaggcactcgcgatt
ttggcgattctctctagccaccccgaaggaaaagcaatcataggatcctctgatgcagtc
ccaagtttggttgagtttatcagaactggctcgcctagaaacagagaaaacgcagctgct
gttctagtccacctctgttctggagacccacaacatcttgtcgaagcgcagaaactcggc
cttatgggtccattgatagatttagctggaaatgggacggatagagggaaacgaaaagca
gcgcagttgcttgaacgcatcagccgtctcgctgaacagcagaaggaaacggctgtgtca
caaccggaagaagaagctgaaccaacacatccagaatccaccacagaagctgcagatact
taa

KEGG   Arabidopsis thaliana (thale cress): AT3G54850
Entry
AT3G54850         CDS       T00041                                 
Symbol
PUB14
Name
(RefSeq) plant U-box 14
  KO
K27628  U-box domain-containing protein 12/13/14 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ath00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    AT3G54850 (PUB14)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT3G54850 (PUB14)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT3G54850 (PUB14)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  U-box type E3
   AT3G54850 (PUB14)
SSDB
Motif
Pfam: Arm U-box ARM_ARMC5 HEAT_2 zf-Nse KAP zf-RING_UBOX Arm_2 zf-C3HC4_4 HEAT_EZ
Other DBs
NCBI-GeneID: 824650
NCBI-ProteinID: NP_191045
TAIR: AT3G54850
UniProt: Q8VZ40 A0A178V9F4
Structure
LinkDB
Position
3:20321353..20324020
AA seq 632 aa
MGLTNCCSHEELMSRLVDSVKEISGFSSSRGFIGKIQGDLVRRITLLSPFFEELIDVNVE
LKKDQITGFEAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIP
YEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHDLAMAENVMDPDPIILKRLSQEL
QLTTIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFVTMESSDPDPSTGSRIV
SRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG
LTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTE
QQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGN
KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEE
GTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTN
QEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKE
LTENGTDRAKRKAASLLELIQQTEGVAVTTVP
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgggattaacgaattgttgttcccacgaggagctaatgagtcgactcgttgactccgtt
aaagaaatatcagggttttcatcttcaaggggttttattgggaagatccaaggcgatctt
gttcgtaggatcacgcttctcagccctttcttcgaggaattgattgacgtcaatgttgaa
ttgaaaaaggatcagattacagggtttgaggctatgagaatcgctcttgattcaagtctt
gagctttttcgatcggttaatggaggaagcaagctttttcagcttttcgatagagattct
cttgtggagaagttccgtgacatgacagtggagatagaagcagcgttaagtcagattcct
tatgagaagattgaggtatcagaggaagtcagagaacaggttcagcttctgcattttcag
ttcaagagagcaaaagaaagatgggaggagtctgatctacagcttagccatgatctagct
atggcagagaatgtgatggatcctgaccctataatcctcaaaagactttcacaagagctc
caacttactaccattgatgagctgaagaaagaatcgcatgcgatacatgagtattttctt
tcatatgatggagatcctgatgactgtttcgagaggatgtcttcacttcttaaaaacctg
gtagactttgtaacaatggaaagttcagaccctgatccatccactggcagcagaatcgtt
tcgagacatcgttctcctgttataccagagtattttcggtgtccgatatcacttgaactg
atgaaggatcctgttatcgtctccactggacagacatatgaaagatcatcaattcagaag
tggcttgatgctggtcataaaacatgtccgaaatctcaggagacacttttacatgctgga
ttaacccctaattatgtgttaaagagtctcattgctttgtggtgtgaaagcaacggcatt
gagctaccgcaaaatcaagggagctgtagaaccacaaaaataggaggaagcagctcttca
gattgtgatcgaacatttgtcctttccttgttagagaaattggccaacggtactacagaa
cagcaaagagctgcagctggagaattaaggttactagccaagaggaacgtggataacaga
gtttgtatcgctgaggctggagccataccactccttgtagagcttctatcctcaccagat
cctcggactcaggaacattctgtgacagctcttctgaatctttccataaatgaagggaac
aaaggagccattgttgatgcaggagccataacggatatagtagaagtcctaaagaacgga
agcatggaagctagagagaacgctgctgcaacccttttcagtttatctgttatagatgaa
aacaaagtggcaataggtgctgctggagctatccaagcacttataagcttgcttgaggaa
ggaacccgaagaggcaaaaaagatgctgctacagcgattttcaacttatgcatataccag
gggaacaaatcaagggcggttaaaggcggtattgttgaccctctgaccagattactgaaa
gatgcaggtggcggaatggtggatgaggctctggccattttagcaattctttcaactaac
caagaagggaaaacagcgatagctgaagcagaatctatcccggttttggttgagattata
aggacagggtcaccaaggaaccgggaaaatgctgcagcaatactttggtatctatgtatt
gggaatatagaaaggctaaatgtagcaagagaggttggtgcagatgtggccttgaaggaa
cttactgagaatggcactgatagagcaaagaggaaagctgcgagcttgttggagcttatt
cagcaaaccgaaggtgttgcagtaactactgttccatga

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