Arabidopsis thaliana (thale cress): AT3G01270
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Entry
AT3G01270 CDS
T00041
Name
(RefSeq) Pectate lyase family protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G01270
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT3G01270
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
821142
NCBI-ProteinID:
NP_186776
TAIR:
AT3G01270
UniProt:
Q9SRH4
Q08A70
A0A5S9X832
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Position
3:complement(82581..84901)
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AA seq
475 aa
AA seq
DB search
METARLFKLVCVICIASLIPTIRANVADETDEYWVNKANEARKHTLMAYHPDPYEIVDHF
HERHYDNSTDVEGTEEEKAVASEEEDVIEMISSPTNSTRRSLTGRGKGKGKGKWSKLTGP
CTASNPIDKCWRCQPDWARRRKKLVHCVRGFGYRTTGGKRGRIYVVTSPRDDDMVNPRPG
TLRHAVIQKEPLWIVFKHDMSIRLSQELMITSDKTIDARGANVHIAYGAGITMQYVHNII
IHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDA
IMGSTAITISNSHFTHHNDVMLLGAQNNNMDDKKMQVTVAYNHFGKGLVQRMPRVRWGFV
HVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRS
EKDVFMNNAYFRQSGNPHFKCSHSRQQMIKPKNGMAVSKLTKYAGALDCRVGKAC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggagacggctaggcttttcaaattagtgtgtgtgatatgtattgccagtttgattccg
accatacgagccaatgttgctgatgagaccgatgagtattgggtaaacaaggccaatgaa
gctcgtaaacatacccttatggcttatcatcccgacccttatgagatcgtcgaccacttc
cacgagcgtcattacgacaactcgactgacgtcgaggggaccgaggaagagaaggcggtc
gcttccgaggaagaggacgtcattgagatgatttctagtccgacaaacagcacaaggcgg
agcctaaccggtaggggcaagggaaaaggaaaaggaaaatggagcaagctaacgggacct
tgcaccgcaagcaaccccatcgataaatgctggcgttgccagcctgattgggccagacgt
cgcaagaagctcgttcactgtgtccgtgggtttggttacaggaccaccggaggcaaacgc
ggccgcatctatgtagtcacgagccccagagacgatgatatggtgaaccctagacctgga
acactacgtcacgctgtgatccagaaagaacctctatggatcgtttttaagcacgatatg
agcattcggttaagccaagagctgatgattactagtgacaagacaatcgatgctcgtggc
gctaacgtgcacatcgcatatggtgctggtatcacgatgcagtacgtgcacaatatcatc
atccatgggcttcacgtccaccacatcgtgaaaagcagtggtggtttgataagagattcg
attaaccactttgggcatagaggagaggctgatggagatggtatctctatctttggggca
acaaacatttggcttgaccacatttctatgtctaaatgccaagatggacttatcgacgct
ataatgggttccaccgcaatcaccatctctaactctcatttcacccaccacaacgatgtg
atgttgcttggtgcacaaaacaacaacatggatgacaagaagatgcaagtcacagtggct
tacaaccatttcggaaaaggacttgtgcagaggatgcctagggtccgatggggtttcgtc
cacgttgtcaacaatgactacactcattgggagctttacgcgatcggtggtagccaaggt
cctaccattctcagccatggaaaccgtttcatcgctcctcctcacaaacaacactacaga
gaggtgacaaagagggattatgcttcagaaagcgaatggaaaaactggaactggagatcc
gagaaagatgttttcatgaacaatgcatatttcagacaatctggaaatcctcatttcaag
tgttcgcattctaggcaacagatgataaagcccaaaaatggtatggccgtttctaagctt
accaaatacgccggagcattggattgccgggtcggaaaagcatgctaa
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