Arabidopsis thaliana (thale cress): AT3G09540
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Entry
AT3G09540 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G09540
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT3G09540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
820111
NCBI-ProteinID:
NP_001326949
TAIR:
AT3G09540
UniProt:
A0A1I9LQU1
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Position
3:complement(2928752..2931362)
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AA seq
284 aa
AA seq
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MGNLHGIHRSHHGGSNFPGEAPNSPFPPPYTAAPAPAPAPSSPSDHHMTVGPYCHVDSSL
RSLAGKAEGFGRAAVGGLNGPICHVTSLADEGPGSLREACKRPEPLWIVFDVSGTINLSS
FVNVSSHTTVDGRGQKVKITGKGLRLKECENVIICNLEFEGGVGPDADAIQIKPKSHNIW
IDRCSLKNYYDGLIDITRESTDITVSRCHFMNHNKTMLIGADTSHVTDRCIRVTIHHCFF
DGTRQRHPRVRFAKVHLFNNYTRHWAIYAVGAGVESQVRNRKIT
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacttacatggcattcacagatcccatcacggcggttctaattttcccggcgaa
gctcccaattcacctttcccaccaccatatacagccgctccagctccagctccagctccg
tcatcgccatccgatcaccacatgacagtgggaccttattgccacgtagactccagcctc
cgctctctcgccggaaaggccgaaggtttcggccgcgccgccgttggtggtctaaatggt
ccgatttgccacgtcacttctttagctgacgagggtccaggatcgttgcgagaggcttgc
aagaggccagaacctttatggatcgtgttcgatgtatcgggaacgatcaatctgtcttcg
tttgtcaacgtatcatcgcacacaacggtggacgggagaggacaaaaagtgaagataacg
ggaaaagggttaaggctaaaagagtgtgaaaacgttataatctgcaatcttgaatttgaa
ggcggtgtgggaccagacgcagacgctattcagatcaaaccaaaatcgcacaatatttgg
attgatcggtgtagtctcaagaattactatgatggtttgattgatatcacacgagaaagc
actgacatcactgtctcaagatgccatttcatgaaccacaacaaaactatgttaatagga
gcggacacaagtcacgttacggaccgatgcataagagttacgatacatcactgcttcttc
gacggtacacgtcagcgacaccctcgcgttcgcttcgcaaaagtccatctcttcaacaac
tacactcgtcattgggccatttacgctgttggtgctggtgtcgaatctcaggtccgtaat
cggaagataacatag
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