Arabidopsis thaliana (thale cress): AT3G24230
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Entry
AT3G24230 CDS
T00041
Name
(RefSeq) Pectate lyase family protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G24230
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AT3G24230
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
822010
NCBI-ProteinID:
NP_189065
TAIR:
AT3G24230
UniProt:
Q9LRM5
A0A654FB66
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Position
3:8774541..8777612
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AA seq
452 aa
AA seq
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MATSSLKLTSACFVLLFIFVGCVLTATNLRNNEISRSRKLKTEDSKSFNSSPMTTRLDGV
VELNEHAVTDPDKVAHEVSNLIHMSEQNITARRKLGFFSCGNGNLIDDCWRCDRNWNKNR
KHLADCGMGFGSKAFGGRNGSYYVVTDHSDDDVVNPKPGTLRHAVIQVEPLWIIFKRDMV
IKLKQELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRSSP
SQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVM
LLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANP
TINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTPSGEGASGDS
QTLSLPAKPASMVDAITASAGALSCRRGKPCY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcatctctgaaactgaccagtgcttgtttcgtcttgctcttcatcttcgtt
ggctgcgttctcacagcaacaaatctccgaaacaacgaaatctctcgatcgaggaagctg
aaaacagaggattcaaagagctttaacagttcaccaatgacgactaggcttgatggtgta
gtagagttgaatgaacacgcagttactgatccagacaaagttgcccatgaagtctctaac
cttattcacatgagtgaacagaacatcactgcaaggaggaagcttggcttcttttcatgt
ggaaatggcaatctaatagatgattgttggcgttgcgaccgcaactggaacaagaaccgt
aaacacctagcggattgtgggatgggttttggaagtaaagcgtttggtggtcgtaatgga
agttactatgtggtcactgaccatagtgatgatgacgttgtgaatccaaagccaggaact
ttacgtcatgccgtgatccaggttgaaccattatggatcatctttaaaagagacatggtg
ataaagttgaaacaagaactgatcatgaacagtttcaaaaccattgatgctcgtggtgcc
aatgtccacattgccaatggtgcttgcataacaatccaaaatataaccaatgttatcgtt
catggcttgcacattcacgattgcaagagaaccgggaatgtaactgtcagaagctcgcca
agtcaggccgggtttaggggaacggctgatggtgatgctattaatatatttgggtcaagt
catatttggatcgaccacaactcgctctctaactgtactgatggtcttgttgatgttgta
aacggttccactgccattaccatttccaataaccatttcactcaccacgatgaggtgatg
ttgctagggcacaatgattcgtacacacgagacaagatgatgcaagtgacagttgcgtat
aaccattttggagaagggctcatacagagaatgccaaggtgcaggcatggttatttccat
gtggttaacaacgattacacacattggaaaatgtatgctattggaggaagtgcaaaccca
acgataaacagtcaaggcaatagatttgctgctcccaaaaaccactccgccaaggaggtg
acaaaaagattagacacaaaaggtaatgagtggatggagtggaattggagatcagaaaaa
gaccttctagtgaatggagcgttttttacaccatcaggtgaaggagcatcaggagactca
caaactttaagcttaccggctaaaccagcttcaatggtcgacgcaatcactgctagtgca
ggtgcacttagttgccgtagaggcaaaccttgctactag
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