KEGG   Arabidopsis thaliana (thale cress): AT4G02730
Entry
AT4G02730         CDS       T00041                                 
Symbol
WDR5b
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
  KO
K14963  COMPASS component SWD3
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    AT4G02730 (WDR5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ath03036]
    AT4G02730 (WDR5b)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     AT4G02730 (WDR5b)
    NSL complex
     AT4G02730 (WDR5b)
   HMT complexes
    COMPASS/SET1 complex
     AT4G02730 (WDR5b)
    COMPASS/SET1 complex (yeast)
     AT4G02730 (WDR5b)
    MLL-HCF complex
     AT4G02730 (WDR5b)
    MLL3/MLL4 complex
     AT4G02730 (WDR5b)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     AT4G02730 (WDR5b)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_SCAP eIF2A Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_VPS8 WD40_like Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_NWD2_C PROPPIN Beta-prop_Nup120_160 Tricorn_2nd Ge1_WD40 WD_LRWD1 KNTC1_N WDR54 Beta-prop_NOL10_N Beta-prop_LRRK2 VPS8_N Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Toxin_10
Other DBs
NCBI-GeneID: 828189
NCBI-ProteinID: NP_192182
TAIR: AT4G02730
UniProt: Q9SY00
LinkDB
Position
4:1207683..1209287
AA seq 333 aa
MPSGGNGTSNGVANANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLAS
ASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYEC
LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR
DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLS
NYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHT
DAVISVSCHPVQNEISSSGNHLDKTIRIWKQDA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgccaagcggtggtaacggaacaagtaacggagtcgctaacgcgaattccaccggtaac
gcaggaacaagcggaaacgttccgatatataagccataccgtcacctgaaaaccctagaa
ggtcacacggcggcgatctcttgcgtcaaattctccaacgacggcaatcttctcgcttcc
gcttccgtagacaaaaccatgatcctctggtcagcaacaaactactctctcattcatcgt
tacgaaggtcactctagtggtatctccgatctagcttggtcttctgattcgcattacact
tgctctgcttctgatgattgtacgcttcgaatctgggacgctagatctccttatgaatgt
cttaaggttcttagaggtcatacgaatttcgtcttctgtgttaatttcaatcctccttcg
aatttgattgtgtctggatcgttcgatgagacgattcgtatttgggaggttaagactggg
aagtgtgttaggatgattaaagctcattcgatgccgatttcgagtgtgcattttaataga
gatggatcgttgattgtttcggcaagtcatgatggttcttgtaagatttgggatgctaaa
gaaggaacttgcttgaagactcttattgatgataaatctccggctgtttctttcgctaag
ttctcgcccaatggcaagtttatactcgttgctactctcgatagtactctcaagctgtcg
aactatgcgacggggaagtttttgaaagtgtatacaggacatactaacaaagtgttctgt
atcacatcggcgttttctgtaacgaatgggaagtacattgtgagtggatcagaggataat
tgtgtgtatctgtgggatcttcaagcgagaaatatactgcagagactagaaggccacaca
gacgcagtgatctcagtgagttgccatccggttcagaacgagatatcttcatcgggtaat
catttggataaaactatcaggatttggaaacaggatgcttga

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