Arabidopsis thaliana (thale cress): AT4G21540
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Entry
AT4G21540 CDS
T00041
Symbol
SPHK1
Name
(RefSeq) sphingosine kinase 1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00600
Sphingolipid metabolism
ath01100
Metabolic pathways
ath04148
Efferocytosis
Module
ath_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
AT4G21540 (SPHK1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
AT4G21540 (SPHK1)
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
AT4G21540 (SPHK1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Motif
Other DBs
NCBI-GeneID:
828239
NCBI-ProteinID:
NP_193885
TAIR:
AT4G21540
UniProt:
Q8L7L1
A0A178V174
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Position
4:11459228..11462651
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AA seq
485 aa
AA seq
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MDRQPERENDELPSPAIISDRVLVNGVVTPLTLTAEGELRSTESGRRKSTLAKEILSFVV
EGNKVRVKTLVEKGGGICCRGSAGDYARNDFVFEPLSDESRKLWSDKFHQHLVSLGRPKK
LLVFVNPFGGKKTARKIFQEEVKPLFEDANIQLEIQETKYQLHAKEIVRSMDVSKYDGIV
CVSGDGILVEVVNGLLEREDWKTAIKLPIGMVPAGSGNGMIKSLLEPVGLPCSATSATIS
IIRGRTRSLDVATISQGTTKFFSVLMLAWGLVADIDIESEKFRWMGSARFDIYGLQRIIC
LRQYHGRILFVPAPGFESYGQRASCSIDKEPSGSDKTLVYQGPDSKLENLDWREMKGPFV
SVWLHNVPWGAENTLAAPDAKFSDGFLDLIVMKDCPKLALLSLMTKLSDGTHVQSPYASY
LKVKAFVLEPGARIDEPDKEGIIDSDGEVLARGRKSYKCDQKALMSYDKLQISVDQGLAT
LFSPE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcagccggagagggagaatgatgaactaccatctccggcgataatttccgac
cgagttctggtaaatggtgttgtcacgccgttaacgttgaccgccgagggagagctacga
tcgacggaatctggacggcggaaatcgacgttggcaaaagaaatcctgagtttcgtcgtg
gaaggtaacaaggttagagtaaagaccttggttgagaaaggaggaggaatttgctgtaga
ggaagtgctggagattatgcgaggaacgatttcgttttcgagcctctctctgatgaatct
agaaagctttggtccgataagttccatcaacacctcgtctctctcggtcggccaaagaaa
ttgcttgtgtttgtgaatccgtttggcgggaagaaaacagcgagaaagatatttcaagag
gaagtaaagccattgtttgaagatgcaaatattcaacttgagattcaagaaaccaagtat
cagttgcatgcaaaggaaattgttaggtccatggatgtatcaaaatacgatggtattgtt
tgtgttagcggtgacggtatccttgttgaggttgtaaatggactgcttgaaagagaagac
tggaagactgccataaaattgccgatcggaatggtccctgcaggaagtggtaatggcatg
attaaatcattgttggaaccggtagggcttccttgtagtgcaacaagtgctactatttcg
ataatccgaggtcgtacacgttctctagatgtagcaactatctcacaagggactaccaaa
ttcttcagtgtcttgatgcttgcttggggtttagtggctgatatagacatcgagtcagag
aaattcagatggatgggtagtgctcgctttgatatctatggtcttcagaggataatatgc
ttaagacaataccatggacgaattctatttgtgccagctcctgggttcgaaagctatggg
caacgagccagttgcagtatagataaagagccatctggtagtgataagacactcgtatac
caaggacctgatagtaaacttgaaaatctggattggagagaaatgaaaggcccatttgtt
tcagtatggcttcataatgttccctggggtgctgagaacactttggctgctcctgacgct
aagttttctgatggcttcctggatttgattgtcatgaaagactgtcctaaactagccttg
ctatcacttatgacaaagttgagtgatggaacccatgtccaatcaccatatgcatcatat
ctgaaggtgaaggcattcgtactggagccaggtgcacgcatagacgaaccagacaaggaa
ggaatcatagattcagatggagaagttttggcaagaggaagaaaatcgtacaaatgtgat
caaaaggctttgatgtcttacgacaagcttcaaataagtgttgatcaaggtttagccact
ctcttctctcctgaataa
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