KEGG   Arabidopsis thaliana (thale cress): AT5G05560
Entry
AT5G05560         CDS       T00041                                 
Symbol
EMB2771
Name
(RefSeq) E3 ubiquitin ligase
  KO
K03348  anaphase-promoting complex subunit 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT5G05560 (EMB2771)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G05560 (EMB2771)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT5G05560 (EMB2771)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Other subunits
     AT5G05560 (EMB2771)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    AT5G05560 (EMB2771)
SSDB
Motif
Pfam: ANAPC1 Apc1_MidN APC1_3rd APC1_C PC_rep
Other DBs
NCBI-GeneID: 830439
NCBI-ProteinID: NP_001318485
TAIR: AT5G05560
UniProt: A0A2H1ZE59
LinkDB
Position
5:1640098..1654830
AA seq 1711 aa
MPPGVRQLTVLGKFKPFGLIAEATDGKSPDDSYQYFLFDPELTGERDDADGNDANFSRQR
EHELFIRDNCIIWTSGSRVLKRFTLSSAVIKACWSNLGRGTEAFLCVLQIACLTIYNTSG
EVVSVPLMRTVKSIWPLPCGLLLEQAGEVNPPSHVPFSPVSPILGSREMLRQRKEVGNSS
PQNFHSPVAHDLISKRDMPCMSSHLILRDPLEEPGPTYVEERGKLTIMKDYDERTIWTSD
RLPLMTSYNKGKMQHSVWAAEFIESNLEASASCSSGIVPDAVLSKRVSFRRIWQAKGAKK
AASKVFLATDNSVPVICFLILEQKKLLSVGLQTVEINNEILFDVKPDISWSVSAIAAAPV
VVTRSQVKIGLLPHLDIIVLSPENDLFLYSGKQCLCRYVLPSWLGESIGSGDGESAKTDS
GFRNLKITGLSDAVLGSINLSVNHSQIFRCALTGKPSSSLANDCIAAIAEGLRSDLYSLF
LSLLWGDGHSDLQGSSIHFEWEALCNIFLEICQKPTVVHRKQPKTASESSWEFLLISKFH
KTYSRFHNGITSINRLDLEGIVPFDSKICSEETLGSSCELMVQSLDCLHAVYESLKMDNL
RKQDLHHLAVLLCNIAKFLDEKCYLDYYIRDFPRLSTTIGACTTLSSSRKPPNLFRWLEN
CLRRGCLSTNFDDLPDLIRRDGCSIVSWARKVVSFYSVLFGDKPEGRTLSSGVPCNIAPG
SYSCNEELTILAMAGERFGLHQLDLLPSGVSLPLRHALDSCRESPPADWPAIAYVLLGRE
DMALSVFRNFSSSKEFEMQSNTSLISMSIPYMLHLHPVIVPSSESIGLENTKIEDTNSVD
GSVIDGMEHIFNSYTQLRYGRDLRLNEVRRLLCSARPVVVQTAANPTISDQEQQQDHLWR
IAQRTAVLPLGRGAFTLSTIHTLLTEAFTVPKLVLAGRLPSQQNAIVNLDPNIRNIQELK
TWPEFHNAVAAGLRLAPLQGKVSRTWIRYNKPGEPNAVHAGLLFGLGLQGYLHVLNLSDI
YQYFTQDHESTTVGLMLGLAASYRGTMQPDIAKALFFHVPARYQASYTEFEIPTLLQSAA
LVSVGMLFEGSAHQQTMQLLLGEIGRRSAGDNVLEREGYAVSAGFSLGLVALGRGGDALG
SMDSLVNRLLLYLGAKEERSILVPSLEDHRSAAQITDGSTSNVDITAPGAIIALTLMYLK
TESEVIFSKLSIPQTHYDLECVRPDFIMLRVIARNLIMWSRICPTCDWIQSQVPEVVKNG
ISQLRDDMDNMYEVDVEALVQAYVNIVAGACISLGLRFAGTRDGNARDLLNSYALYLLNE
IKPLSATPGNAFPRGISKFVDRGTLEMCLYLIIISLSVVMAGSGDLQVFRLLRFLRSRNS
ADGHANYGTQMAVSLATGFLFLGGGMRTFSTNNGSLAMLLITLYPRLPSGPNDNRCHLQA
FRHLYVLATEARWLQTIDVDSGLPVYAPLEVTVKETKLYSETKFCEITPCILPERAILKR
ICVCGPRYWPQQIELVFGLRTLGESNLIANSHRELDSDSVDHLVSTFSSDPSLIAFAQLC
CDKSWNNSFDFLILDLILWSQVALAYNEAVSTGRLASSGGFVQSIFLASLRKRCEEVLNC
STELKINLRNYLTSEAWPYDKNSKLQKDIIILSWYLKWFNVPSPSIIKAAVEKIKSKSKN
STSAIPLLRLLLPNTHISVIGEIDRVFFPSN
NT seq 5136 nt   +upstreamnt  +downstreamnt
atgcctccaggggttcgccaacttaccgtcctcggaaagtttaaacctttcggtctaatc
gccgaagctactgatggtaaatcaccggatgattcctatcagtatttcctcttcgatcct
gagctcactggcgagcgagatgatgctgatggcaatgatgccaacttctcgcggcagaga
gagcacgagctcttcatccgagacaactgcataatctggacaagcggttcgcgggtcctc
aagcgttttaccttgtcttctgccgtcattaaggcatgctggagcaaccttggtcgaggg
acagaagcttttctttgtgtattacaaattgcttgcttaacaatctacaacacatcaggc
gaagttgtatctgttccactaatgcgtactgtcaaatcaatatggcctctaccatgtggt
ctacttcttgagcaagctggtgaagtgaatccaccctcacatgttccattttctcctgtt
agccccatccttggttctcgtgagatgctgcgccaaagaaaagaagttgggaatagttca
ccacaaaacttccattccccagtcgcgcatgaccttattagcaaaagagatatgccatgc
atgtcttcccatctgattctaagagatccactagaggaacctgggccaacctacgttgaa
gagagggggaagttgaccataatgaaggactacgatgagaggacaatttggacaagtgac
cgtctacctcttatgacgtcgtataacaaaggcaagatgcaacattctgtgtgggcggcc
gaatttatagagtcaaaccttgaagcttctgcgtcatgttcaagcggcattgttcctgat
gctgttctctcgaagcgggtttcttttcgtagaatatggcaagcgaaaggtgctaagaaa
gctgcatctaaggtctttttggcaactgataattcagtcccagtaatttgctttctgatt
ctagaacaaaagaagctgttatcggtgggacttcaaactgttgaaatcaataacgaaatt
ctgttcgatgttaagcctgatataagctggagtgtgtctgcgattgctgctgcacctgtt
gttgtgacacgttctcaagtgaaaataggactgcttccacatttggatatcattgtttta
tctccagaaaatgacctctttctctattcaggaaaacaatgtctctgtagatatgtatta
ccttcttggttgggagaaagtattggttccggggatggagagtctgcaaaaacagattca
ggtttcaggaacctgaagatcacaggattgtctgatgctgttttaggatctatcaatctc
tcagttaaccattcacagatctttcggtgtgccttaactggtaaaccttcatcgtcactt
gcaaatgattgcatagcagccatagctgagggactacgatccgatctgtacagtttgttt
ctctctcttctttggggagatggtcattctgacctgcaaggttccagtattcattttgaa
tgggaagcattatgcaacatttttctggagatctgtcaaaagcctactgttgtgcatcga
aagcaacccaaaacagcatcagagtcctcctgggagtttcttctcatcagcaaatttcat
aagacctactctaggtttcacaatggtattacttcaataaatcgtttagatctggaaggc
attgtcccatttgattccaagatttgtagtgaagaaacactgggcagctcatgtgaacta
atggtccagagtttagattgtctccatgcagtttatgagagcttgaagatggataatcta
cggaaacaggatttgcatcacttggctgttttgttgtgcaatattgccaagtttctggat
gagaagtgttacttagattactacatacgtgattttcctcgtctgtcaacaactattggg
gcgtgcacaaccctttcttctagcagaaaacctccaaatttatttagatggcttgagaat
tgtttaagacgtggatgtttatcaacaaactttgatgacctcccagatttgatccgtaga
gatgggtgctccatagtaagctgggcaaggaaagttgtttccttctacagtgtgttattt
ggtgataagccagaaggacggacactttcatcaggtgtcccctgtaatatcgcgccagga
tcatactcctgtaacgaggaactcactatcttagctatggcaggagagagatttgggctt
caccaactggatttgctaccttctggtgtttctctcccgctaagacatgcactggatagc
tgtcgggaatctcctccagctgactggccagcaattgcttatgtgcttcttggtcgagaa
gatatggccctatccgtcttcagaaattttagttcatctaaggaatttgagatgcagtca
aatacgagtttgatatcgatgtccataccttacatgctacatttgcatccagtaattgtt
ccatcctctgagtcgattggcttagaaaacactaagattgaggatacaaattctgtggat
ggttctgtgatagatggaatggagcatatcttcaactcctacacacagctacggtatggc
cgggatctaagattgaatgaggttagacgtcttttgtgctctgcaagacctgtggtagtt
caaacggctgctaaccctactatatcagatcaggagcagcaacaggaccatctttggcgc
atagcacagaggactgctgttctacccctcgggcgtggagcattcacattatcaacgata
catactcttttaactgaggcgtttactgtaccaaagcttgttttagctggtcgactgcct
tctcaacaaaatgccattgttaatctagatccaaacataaggaatatccaagaattaaag
acctggccagagtttcataacgctgttgctgctgggttacgactggctccgcttcaggga
aaggtctccagaacgtggattagatacaataaacctggagagccaaatgctgttcatgct
ggacttctgtttggcctgggattacagggatatttgcatgtgttaaaccttagtgacata
taccaatatttcactcaggaccatgagagcactacggtaggtttgatgcttggtctggcc
gcttcatacaggggaacaatgcaacctgatattgcaaaggctctctttttccatgttcct
gctcgataccaagcttcatatactgagtttgagataccaacacttctacagtctgcagct
ttagtctccgttggcatgctatttgaaggatcagcacaccagcagacaatgcaattactt
ttgggtgaaattggccgtagaagtgcaggggacaatgtccttgaaagggagggttatgct
gtatctgcaggattctcacttggtcttgtagctttgggccgtggaggtgatgcgctcggt
tccatggactccttggtcaatcgcttactcctgtatttaggagcaaaagaggaaagatct
atccttgtaccatcccttgaagatcaccgaagtgctgcacagataacagacggaagcact
tctaatgttgatataactgcacctggagcgataatagctctcacattaatgtatcttaag
acagaatcagaggtcatcttctcaaagctctctattcctcaaacacattacgatttggag
tgcgttaggcctgatttcattatgctccgtgtcattgctcggaacttgataatgtggagc
aggatctgtcctacttgtgattggattcagtctcaagttcctgaagtagtcaaaaatggt
atcagccaactccgagatgacatggataatatgtatgaggtggatgttgaagcccttgtt
caggcatacgtcaatatagtggccggggcctgcatttcacttgggctgagatttgctggt
acgagggatggaaatgctcgtgacttacttaactcctacgctctctatcttttgaatgag
atcaagcctctttctgccacacctggaaatgcatttcccaggggaatatcaaaatttgtt
gatcggggaacacttgaaatgtgtctttatcttatcattatttctctgtcagtggtcatg
gcgggatctggagacttgcaagtttttcggttgttgagatttctccgcagccgaaactct
gccgatggacatgctaactatggcacacaaatggcagtgagcttagccacaggattcttg
tttcttggaggcggtatgcgaacattttcaacgaataatggctcactggcaatgttgctc
attactctctatccacggttgccttctggaccaaatgacaaccgttgtcacctccaggca
ttcaggcatttatatgtccttgcaacagaggctcgctggctgcagaccattgatgttgat
tctggtctgcctgtctatgcccctctagaagtcacagtaaaagagacaaaactttattca
gaaacaaaattttgcgagataacaccgtgcattctgccagagcgtgctattctaaagaga
atttgtgtatgtggtccccgatactggccccaacaaattgagctagtttttggtttaagg
actctgggagaatctaatttgattgctaatagtcatagagaactggattctgatagtgtt
gatcacttggtcagcactttctcatcagatccaagcctaatagcgtttgcacagttgtgc
tgtgacaaatcttggaataacagctttgatttcctaattttggatctaatcttatggtct
caggttgctcttgcctacaatgaggcagtatcaactggaagattggcctcctcaggtggc
tttgtacagtcaatcttcttagcatcgctgagaaagcgatgtgaagaggttttgaattgc
tcaacggagctgaagattaatttgaggaattatttgacctcagaagcatggccttatgat
aagaactcaaagttgcagaaagatataattattctctcatggtatctaaaatggttcaac
gtaccatctccatcgatcatcaaagcagcagtggaaaagatcaaatccaagtccaaaaac
tcaacttcggcaatacctttgttgcgattgttgttaccaaatacgcatattagtgtgatt
ggtgaaattgatagggtctttttcccctcgaattaa

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