Arabidopsis thaliana (thale cress): AT5G05560
Help
Entry
AT5G05560 CDS
T00041
Symbol
EMB2771
Name
(RefSeq) E3 ubiquitin ligase
KO
K03348
anaphase-promoting complex subunit 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT5G05560 (EMB2771)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G05560 (EMB2771)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G05560 (EMB2771)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Other subunits
AT5G05560 (EMB2771)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
AT5G05560 (EMB2771)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC1
Apc1_MidN
APC1_3rd
APC1_C
PC_rep
Motif
Other DBs
NCBI-GeneID:
830439
NCBI-ProteinID:
NP_001318485
TAIR:
AT5G05560
UniProt:
A0A2H1ZE59
LinkDB
All DBs
Position
5:1640098..1654830
Genome browser
AA seq
1711 aa
AA seq
DB search
MPPGVRQLTVLGKFKPFGLIAEATDGKSPDDSYQYFLFDPELTGERDDADGNDANFSRQR
EHELFIRDNCIIWTSGSRVLKRFTLSSAVIKACWSNLGRGTEAFLCVLQIACLTIYNTSG
EVVSVPLMRTVKSIWPLPCGLLLEQAGEVNPPSHVPFSPVSPILGSREMLRQRKEVGNSS
PQNFHSPVAHDLISKRDMPCMSSHLILRDPLEEPGPTYVEERGKLTIMKDYDERTIWTSD
RLPLMTSYNKGKMQHSVWAAEFIESNLEASASCSSGIVPDAVLSKRVSFRRIWQAKGAKK
AASKVFLATDNSVPVICFLILEQKKLLSVGLQTVEINNEILFDVKPDISWSVSAIAAAPV
VVTRSQVKIGLLPHLDIIVLSPENDLFLYSGKQCLCRYVLPSWLGESIGSGDGESAKTDS
GFRNLKITGLSDAVLGSINLSVNHSQIFRCALTGKPSSSLANDCIAAIAEGLRSDLYSLF
LSLLWGDGHSDLQGSSIHFEWEALCNIFLEICQKPTVVHRKQPKTASESSWEFLLISKFH
KTYSRFHNGITSINRLDLEGIVPFDSKICSEETLGSSCELMVQSLDCLHAVYESLKMDNL
RKQDLHHLAVLLCNIAKFLDEKCYLDYYIRDFPRLSTTIGACTTLSSSRKPPNLFRWLEN
CLRRGCLSTNFDDLPDLIRRDGCSIVSWARKVVSFYSVLFGDKPEGRTLSSGVPCNIAPG
SYSCNEELTILAMAGERFGLHQLDLLPSGVSLPLRHALDSCRESPPADWPAIAYVLLGRE
DMALSVFRNFSSSKEFEMQSNTSLISMSIPYMLHLHPVIVPSSESIGLENTKIEDTNSVD
GSVIDGMEHIFNSYTQLRYGRDLRLNEVRRLLCSARPVVVQTAANPTISDQEQQQDHLWR
IAQRTAVLPLGRGAFTLSTIHTLLTEAFTVPKLVLAGRLPSQQNAIVNLDPNIRNIQELK
TWPEFHNAVAAGLRLAPLQGKVSRTWIRYNKPGEPNAVHAGLLFGLGLQGYLHVLNLSDI
YQYFTQDHESTTVGLMLGLAASYRGTMQPDIAKALFFHVPARYQASYTEFEIPTLLQSAA
LVSVGMLFEGSAHQQTMQLLLGEIGRRSAGDNVLEREGYAVSAGFSLGLVALGRGGDALG
SMDSLVNRLLLYLGAKEERSILVPSLEDHRSAAQITDGSTSNVDITAPGAIIALTLMYLK
TESEVIFSKLSIPQTHYDLECVRPDFIMLRVIARNLIMWSRICPTCDWIQSQVPEVVKNG
ISQLRDDMDNMYEVDVEALVQAYVNIVAGACISLGLRFAGTRDGNARDLLNSYALYLLNE
IKPLSATPGNAFPRGISKFVDRGTLEMCLYLIIISLSVVMAGSGDLQVFRLLRFLRSRNS
ADGHANYGTQMAVSLATGFLFLGGGMRTFSTNNGSLAMLLITLYPRLPSGPNDNRCHLQA
FRHLYVLATEARWLQTIDVDSGLPVYAPLEVTVKETKLYSETKFCEITPCILPERAILKR
ICVCGPRYWPQQIELVFGLRTLGESNLIANSHRELDSDSVDHLVSTFSSDPSLIAFAQLC
CDKSWNNSFDFLILDLILWSQVALAYNEAVSTGRLASSGGFVQSIFLASLRKRCEEVLNC
STELKINLRNYLTSEAWPYDKNSKLQKDIIILSWYLKWFNVPSPSIIKAAVEKIKSKSKN
STSAIPLLRLLLPNTHISVIGEIDRVFFPSN
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaggggttcgccaacttaccgtcctcggaaagtttaaacctttcggtctaatc
gccgaagctactgatggtaaatcaccggatgattcctatcagtatttcctcttcgatcct
gagctcactggcgagcgagatgatgctgatggcaatgatgccaacttctcgcggcagaga
gagcacgagctcttcatccgagacaactgcataatctggacaagcggttcgcgggtcctc
aagcgttttaccttgtcttctgccgtcattaaggcatgctggagcaaccttggtcgaggg
acagaagcttttctttgtgtattacaaattgcttgcttaacaatctacaacacatcaggc
gaagttgtatctgttccactaatgcgtactgtcaaatcaatatggcctctaccatgtggt
ctacttcttgagcaagctggtgaagtgaatccaccctcacatgttccattttctcctgtt
agccccatccttggttctcgtgagatgctgcgccaaagaaaagaagttgggaatagttca
ccacaaaacttccattccccagtcgcgcatgaccttattagcaaaagagatatgccatgc
atgtcttcccatctgattctaagagatccactagaggaacctgggccaacctacgttgaa
gagagggggaagttgaccataatgaaggactacgatgagaggacaatttggacaagtgac
cgtctacctcttatgacgtcgtataacaaaggcaagatgcaacattctgtgtgggcggcc
gaatttatagagtcaaaccttgaagcttctgcgtcatgttcaagcggcattgttcctgat
gctgttctctcgaagcgggtttcttttcgtagaatatggcaagcgaaaggtgctaagaaa
gctgcatctaaggtctttttggcaactgataattcagtcccagtaatttgctttctgatt
ctagaacaaaagaagctgttatcggtgggacttcaaactgttgaaatcaataacgaaatt
ctgttcgatgttaagcctgatataagctggagtgtgtctgcgattgctgctgcacctgtt
gttgtgacacgttctcaagtgaaaataggactgcttccacatttggatatcattgtttta
tctccagaaaatgacctctttctctattcaggaaaacaatgtctctgtagatatgtatta
ccttcttggttgggagaaagtattggttccggggatggagagtctgcaaaaacagattca
ggtttcaggaacctgaagatcacaggattgtctgatgctgttttaggatctatcaatctc
tcagttaaccattcacagatctttcggtgtgccttaactggtaaaccttcatcgtcactt
gcaaatgattgcatagcagccatagctgagggactacgatccgatctgtacagtttgttt
ctctctcttctttggggagatggtcattctgacctgcaaggttccagtattcattttgaa
tgggaagcattatgcaacatttttctggagatctgtcaaaagcctactgttgtgcatcga
aagcaacccaaaacagcatcagagtcctcctgggagtttcttctcatcagcaaatttcat
aagacctactctaggtttcacaatggtattacttcaataaatcgtttagatctggaaggc
attgtcccatttgattccaagatttgtagtgaagaaacactgggcagctcatgtgaacta
atggtccagagtttagattgtctccatgcagtttatgagagcttgaagatggataatcta
cggaaacaggatttgcatcacttggctgttttgttgtgcaatattgccaagtttctggat
gagaagtgttacttagattactacatacgtgattttcctcgtctgtcaacaactattggg
gcgtgcacaaccctttcttctagcagaaaacctccaaatttatttagatggcttgagaat
tgtttaagacgtggatgtttatcaacaaactttgatgacctcccagatttgatccgtaga
gatgggtgctccatagtaagctgggcaaggaaagttgtttccttctacagtgtgttattt
ggtgataagccagaaggacggacactttcatcaggtgtcccctgtaatatcgcgccagga
tcatactcctgtaacgaggaactcactatcttagctatggcaggagagagatttgggctt
caccaactggatttgctaccttctggtgtttctctcccgctaagacatgcactggatagc
tgtcgggaatctcctccagctgactggccagcaattgcttatgtgcttcttggtcgagaa
gatatggccctatccgtcttcagaaattttagttcatctaaggaatttgagatgcagtca
aatacgagtttgatatcgatgtccataccttacatgctacatttgcatccagtaattgtt
ccatcctctgagtcgattggcttagaaaacactaagattgaggatacaaattctgtggat
ggttctgtgatagatggaatggagcatatcttcaactcctacacacagctacggtatggc
cgggatctaagattgaatgaggttagacgtcttttgtgctctgcaagacctgtggtagtt
caaacggctgctaaccctactatatcagatcaggagcagcaacaggaccatctttggcgc
atagcacagaggactgctgttctacccctcgggcgtggagcattcacattatcaacgata
catactcttttaactgaggcgtttactgtaccaaagcttgttttagctggtcgactgcct
tctcaacaaaatgccattgttaatctagatccaaacataaggaatatccaagaattaaag
acctggccagagtttcataacgctgttgctgctgggttacgactggctccgcttcaggga
aaggtctccagaacgtggattagatacaataaacctggagagccaaatgctgttcatgct
ggacttctgtttggcctgggattacagggatatttgcatgtgttaaaccttagtgacata
taccaatatttcactcaggaccatgagagcactacggtaggtttgatgcttggtctggcc
gcttcatacaggggaacaatgcaacctgatattgcaaaggctctctttttccatgttcct
gctcgataccaagcttcatatactgagtttgagataccaacacttctacagtctgcagct
ttagtctccgttggcatgctatttgaaggatcagcacaccagcagacaatgcaattactt
ttgggtgaaattggccgtagaagtgcaggggacaatgtccttgaaagggagggttatgct
gtatctgcaggattctcacttggtcttgtagctttgggccgtggaggtgatgcgctcggt
tccatggactccttggtcaatcgcttactcctgtatttaggagcaaaagaggaaagatct
atccttgtaccatcccttgaagatcaccgaagtgctgcacagataacagacggaagcact
tctaatgttgatataactgcacctggagcgataatagctctcacattaatgtatcttaag
acagaatcagaggtcatcttctcaaagctctctattcctcaaacacattacgatttggag
tgcgttaggcctgatttcattatgctccgtgtcattgctcggaacttgataatgtggagc
aggatctgtcctacttgtgattggattcagtctcaagttcctgaagtagtcaaaaatggt
atcagccaactccgagatgacatggataatatgtatgaggtggatgttgaagcccttgtt
caggcatacgtcaatatagtggccggggcctgcatttcacttgggctgagatttgctggt
acgagggatggaaatgctcgtgacttacttaactcctacgctctctatcttttgaatgag
atcaagcctctttctgccacacctggaaatgcatttcccaggggaatatcaaaatttgtt
gatcggggaacacttgaaatgtgtctttatcttatcattatttctctgtcagtggtcatg
gcgggatctggagacttgcaagtttttcggttgttgagatttctccgcagccgaaactct
gccgatggacatgctaactatggcacacaaatggcagtgagcttagccacaggattcttg
tttcttggaggcggtatgcgaacattttcaacgaataatggctcactggcaatgttgctc
attactctctatccacggttgccttctggaccaaatgacaaccgttgtcacctccaggca
ttcaggcatttatatgtccttgcaacagaggctcgctggctgcagaccattgatgttgat
tctggtctgcctgtctatgcccctctagaagtcacagtaaaagagacaaaactttattca
gaaacaaaattttgcgagataacaccgtgcattctgccagagcgtgctattctaaagaga
atttgtgtatgtggtccccgatactggccccaacaaattgagctagtttttggtttaagg
actctgggagaatctaatttgattgctaatagtcatagagaactggattctgatagtgtt
gatcacttggtcagcactttctcatcagatccaagcctaatagcgtttgcacagttgtgc
tgtgacaaatcttggaataacagctttgatttcctaattttggatctaatcttatggtct
caggttgctcttgcctacaatgaggcagtatcaactggaagattggcctcctcaggtggc
tttgtacagtcaatcttcttagcatcgctgagaaagcgatgtgaagaggttttgaattgc
tcaacggagctgaagattaatttgaggaattatttgacctcagaagcatggccttatgat
aagaactcaaagttgcagaaagatataattattctctcatggtatctaaaatggttcaac
gtaccatctccatcgatcatcaaagcagcagtggaaaagatcaaatccaagtccaaaaac
tcaacttcggcaatacctttgttgcgattgttgttaccaaatacgcatattagtgtgatt
ggtgaaattgatagggtctttttcccctcgaattaa
DBGET
integrated database retrieval system