Arabidopsis thaliana (thale cress): AT5G18110
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Entry
AT5G18110 CDS
T00041
Symbol
NCBP
Name
(RefSeq) Putative cap-binding protein
KO
K03259
translation initiation factor 4E
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G18110 (NCBP)
03012 Translation factors [BR:
ath03012
]
AT5G18110 (NCBP)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
AT5G18110 (NCBP)
mRNA cycle factors
Common to processing body (P body) and stress granule
AT5G18110 (NCBP)
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
eIF-4
AT5G18110 (NCBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF4E
Peroxin-22
Motif
Other DBs
NCBI-GeneID:
831929
NCBI-ProteinID:
NP_197312
TAIR:
AT5G18110
UniProt:
Q9FK59
LinkDB
All DBs
Position
5:complement(5988744..5990681)
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AA seq
221 aa
AA seq
DB search
MEVLDRRDDEIRDSGNMDSIKSHYVTDSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGV
RNQSYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGG
KWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAV
MGLRDSIKRHLKLPHAYVMEYKPHDASLRDNSSYRNTWLRG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaggttttggataggagagacgatgagatcagggactcgggaaacatggacagcatc
aagtcacactatgttaccgactctgtttccgaggaacgccgctctcgtgagctcaaggat
ggagaccatcctttacggtacaagttttcgatatggtacactcgtcgcacaccaggggtt
cggaaccagtcttatgaagataacatcaagaagatggtagaattcagcacggttgaagga
ttttgggcctgctactgtcaccttgctcgttcttctctcttgcctagtccaacagatctt
catttctttaaggatgggattcgtccattgtgggaggatggtgccaactgcaatggagga
aagtggatcatacgtttctcaaaagttgtatctgctcgcttctgggaggatctgcttctt
gcgttggtaggcgaccagcttgatgatgctgataacatatgtggggcagtactgagtgtc
cgtttcaacgaggacatcattagtgtatggaatcgcaatgcttctgaccatcaggcagtg
atgggtttgagagactcaatcaagcggcatttgaagttgcctcatgcatatgtcatggaa
tacaagccacacgatgcttctctccgcgacaactcttcctacagaaacacatggctgaga
ggatag
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