Arabidopsis thaliana (thale cress): AT5G38830
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Entry
AT5G38830 CDS
T00041
Name
(RefSeq) Cysteinyl-tRNA synthetase, class Ia family protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AT5G38830
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ath01007
]
AT5G38830
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT5G38830
Enzymes [BR:
ath01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
AT5G38830
Amino acid related enzymes [BR:
ath01007
]
Aminoacyl-tRNA synthetase
Class I (G)
AT5G38830
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AT5G38830
Prokaryotic type
AT5G38830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1f
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
833874
NCBI-ProteinID:
NP_198699
TAIR:
AT5G38830
UniProt:
B3LFA4
A0A654G681
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Position
5:complement(15545519..15548293)
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AA seq
511 aa
AA seq
DB search
MEAEKMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYL
KHLDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRV
SEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRK
RNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHH
ENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMS
AQYRSPLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGKSEQTAEGKDIIK
KLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIEKAA
REVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIR
EKLTRKGIALMDIGKETVWRPCFPSQADSST
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagaaaatggaattgaagctctacaacacgatgacgcaacagaaagaagtt
ttgattccaatcactcctggcaaaatcggattatacgtctgtggtatcaccgcttacgat
ttcagccatatcggccatgctcgcgccgccgtttccttcgatgttctttacagatacttg
aagcatttggattatgatgttacttttgtccgcaatttcactgatgttgatgacaagatt
attgatcgtgctaataagaatggagaagacccgttagatttgagtaatcggttttgcgat
gaatatttggtagatatgggtgctctgcagtgcctccctcccacccaccagcctcgtgtc
agcgaacatatggacaacatcattaagatgatagaaaagatcattgagaaagattgtggg
tatgtagtggaaggggatgtgttcttctccgttgacaaatcaccgaattatgggaaatta
tctgggcagttgttggaacatacacgagctggtgagcgtgttgctgttgattcgagaaag
cgtaaccctgctgattttgcattatggaaggcggcaaagcctgatgagccaagttgggag
agcccttggggtccaggaagaccaggatggcacatcgagtgcagtgcaatgagtgttcat
tatctgtctccgaaatttgatattcatggaggtggtgcagatcttaaattcccgcatcat
gaaaatgagatcgcccagacatgtgctgcatgtgaggatagtggtgtaaattactggttg
cataatgggcatgtcactatcaacaacgagaagatggcaaaatcaaagcacaactttaaa
acgattagagaaataaccgctagctaccatccattggctctgaggcacttcttgatgagt
gcacagtaccggtctcctctgagtttcactgcctcgcagctagagagttcgtcagaagct
ttatactatgtttaccagactttacaagatcttgatgaaggtctgtcaccatatcaagac
gcattgtctgaagatggtggaaaatctgaacaaactgcagaaggaaaagacatcattaag
aagctaaaaactgagtttgaatcaaagatgttagacgatttgaatactgcccatatacta
actggtgcttaccaagatgcattgaaattcatcaatgcttcactcagcaagctcaagaaa
atgcagaagaagcagcgaatgtcaatgcttgtgtcactcgttgagattgagaaagcagca
agggaagttcttgatgtacttggtttactcactacactgagctatgccgagattttgaaa
gaaatgaaactaaaaacactaataagagcagaaattggagaagaaggtatttcgcagtta
atagaagaaaggataacagccaggaagaataaagatttcgcgaaaagtgatgagattaga
gagaaactgacaagaaaaggaatagcgttaatggacattggcaaagaaactgtatggaga
ccatgcttcccttctcaggctgattccagcacttga
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