KEGG   Aliarcobacter thereius: ATH_1066
Entry
ATH_1066          CDS       T07638                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
athr  Aliarcobacter thereius
Pathway
athr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:athr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ATH_1066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:athr03019]
    ATH_1066
Messenger RNA biogenesis [BR:athr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ATH_1066
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 KH_KhpA-B KH_PNO1_2nd KH_2 KH_NusA_C KH_NusA_2nd HDOD TFIIA_gamma_N
Other DBs
NCBI-ProteinID: QBF16132
LinkDB
Position
complement(1033706..1035250)
AA seq 514 aa
MESILIAVVAATFSSALTIFVVRKINKAKFEVFIEQAKAKAKIIEHEAEVALKDAQIRAK
IECDREFRNAKKDYEQMFLKIERKEQELNEHLECELRQIKREKEQIEDNNRKIKGLKEGI
EEQKRSYEQKKLEAIKILENGSGLTKEEAKELLLKKVEEDSRATISSMFRRKYKIAEQNS
KQEVNNILSQAVTRYAGEFAAERLINNIPLNDEETKGKIIGKEGRNIKTLEMLLGVDIII
DDTPNTITISSFNLYRRAIATKTIQELLEDGRIQPARIEEIYKKVQAEFDKNIQKEGEDV
VMELGIKSMHPELIKLVGRLRYRASYGQNALAHTLEVSHLAGLIAAQMGGDAILARRAGI
MHDIGKALTHEAPGSHVDLGADICKRYGECETVINAIYAHHGHEEPINVESAAVCAADAL
SAARPGARREVLESFLKRVEEIENITTSKVGVTNAYAINAGREVRVIVNAELVNDDEAVL
LATEIAKEIEEKVQYPGEIKINVIRELRAESYAR
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggagagtatattaatagcagttgtggctgcaacatttagctcagctcttactattttt
gtagttaggaaaataaataaagcaaaatttgaagtatttattgaacaagcaaaagcaaaa
gcaaaaataatagagcatgaagcagaagttgcattaaaagatgcacaaataagagcaaaa
atagagtgtgatagagagttcagaaatgcaaaaaaagattatgaacagatgtttttaaag
attgaaagaaaagagcaagagttaaatgaacatcttgaatgtgagctaagacaaataaaa
agggaaaaagagcaaatagaagataataataggaagataaaaggtctaaaagagggaatt
gaagagcaaaaaagatcttatgaacagaaaaaactagaagctataaaaatcttagaaaat
ggttcaggtcttacaaaagaagaggcaaaagagttattacttaaaaaagtagaagaggat
tcaagagctacaatttcatctatgtttagaagaaaatataaaatagcagaacaaaattca
aaacaagaagtaaataatattttatctcaagcagttacaagatatgcaggtgaattcgca
gctgagcgacttataaataatattcctttaaatgatgaagagacaaaaggtaaaattatt
ggtaaagaaggaagaaatattaaaactcttgagatgcttttaggagttgatattattatt
gatgatacaccaaatactattacaatttcatcttttaatctttatagaagagcaatagca
acaaaaactattcaagagcttttagaagatggaagaatacaaccagcaagaattgaagag
atttataaaaaagttcaagcagaatttgataaaaatattcaaaaagagggtgaagatgtt
gttatggaacttggaataaaatctatgcatccagaacttataaaacttgttggaagatta
agatatagagcatcttatgggcaaaatgctttagcacatactttagaagtttctcattta
gctggattaattgctgctcaaatgggtggagatgcaatacttgcacgtcgtgctggaatt
atgcatgatattgggaaagctttaactcatgaagcaccaggtagtcatgttgatttgggt
gctgatatttgtaaaagatatggagagtgtgaaactgttataaatgcaatttatgcacat
cacggacatgaagagccaataaatgttgaaagtgcagctgtttgtgcagctgatgcttta
agtgcagcaagaccaggagctagaagagaagttttagagagttttttaaaaagagtagaa
gagattgaaaatataactacaagtaaagttggagttacaaatgcttatgcaataaatgct
ggacgagaagtaagagttattgtaaatgcagagcttgtaaatgatgatgaagcagtttta
ttagcaacagaaatagccaaagagattgaagaaaaagtacaatatcctggtgaaattaaa
ataaatgtaataagagagctaagagcagaaagttatgctagataa

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