Aureibacter tunicatorum: AUTU_28170
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Entry
AUTU_28170 CDS
T09744
Symbol
sucD
Name
(GenBank) succinate--CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
atk
Aureibacter tunicatorum
Pathway
atk00020
Citrate cycle (TCA cycle)
atk00640
Propanoate metabolism
atk00660
C5-Branched dibasic acid metabolism
atk00720
Other carbon fixation pathways
atk01100
Metabolic pathways
atk01110
Biosynthesis of secondary metabolites
atk01120
Microbial metabolism in diverse environments
atk01200
Carbon metabolism
Module
atk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
atk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
atk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AUTU_28170 (sucD)
00640 Propanoate metabolism
AUTU_28170 (sucD)
00660 C5-Branched dibasic acid metabolism
AUTU_28170 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
AUTU_28170 (sucD)
Enzymes [BR:
atk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
AUTU_28170 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Peripla_BP_6
DapB_N
GFO_IDH_MocA
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
BDD05334
LinkDB
All DBs
Position
complement(3358401..3359285)
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AA seq
294 aa
AA seq
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MSVLVNKNSKVIVQGFTGSEGTFHAGQMIDYGTNVVGGVTPGKGGQKHLDKPVFNTVAEA
VEQAGADVSVIFVPPAFAADAIMEAADAGIKVVICITEGIPTKDMIAAKEYLQGKDVRLI
GPNCPGVITPGEAKVGIMPAFIHNPGRIGIVSRSGTLTYEAVDQITKAGLGQSTCIGIGG
DPIIGTTTKEAVQLLMEDPETDAIVMIGEIGGGMEAEAARYVKEFGTKPVVGFIAGQTAP
PGRRMGHAGAIIGGSDDTAAAKMAIMRDCGIHVVESPADLGATVVEALKTLEAK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtattagttaataaaaactctaaagttattgttcaaggctttacgggttctgaa
ggaactttccatgctggacaaatgatcgattacggtacaaacgtagtaggtggtgttact
ccaggaaaaggtggacaaaagcatttggataagccagtattcaacacagtagctgaagct
gtggagcaagctggtgctgatgtgtctgtgattttcgttccgcctgcatttgctgcggat
gcaatcatggaagctgctgacgcgggaattaaagtggttatttgcatcactgagggaatc
ccaacaaaagatatgatcgctgctaaagagtatcttcaaggcaaggatgttcgtcttatt
ggtccgaactgtccaggtgtgattactccaggtgaagcaaaagtaggtatcatgccggct
ttcattcacaacccaggtcgtattggtatcgtttctcgttctggaacattgacttacgaa
gctgtggatcaaatcactaaagctggtcttggccagtctacttgtatcggtatcggagga
gatccaatcattggaacgacaactaaagaagctgttcaacttttgatggaagatcctgaa
actgacgctatcgtgatgatcggtgagattggtggcggaatggaagctgaagctgcaaga
tatgttaaggaattcggtactaagcctgttgtaggttttatcgctggacaaacagcgcct
ccgggacgtcgtatgggacatgctggtgctatcattggtggttctgatgacactgcagct
gctaagatggcgatcatgagagattgcggcattcacgtggttgaatctcctgctgacttg
ggcgcaacagttgttgaagctttgaaaacacttgaggctaaataa
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