Aliarcobacter trophiarum: ATR_1669
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Entry
ATR_1669 CDS
T06356
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
atp
Aliarcobacter trophiarum
Pathway
atp02024
Quorum sensing
atp03060
Protein export
atp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
atp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ATR_1669 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ATR_1669 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATR_1669 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
atp02044
]
ATR_1669 (ffh)
Enzymes [BR:
atp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ATR_1669 (ffh)
Secretion system [BR:
atp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ATR_1669 (ffh)
Eukaryotic Sec-SRP protein
ATR_1669 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
AAA_22
CbiA
SRP54_N
AAA_31
Zeta_toxin
AAA_17
AAA_14
AAA_30
T2SSE
AAA_19
SLFN-g3_helicase
MeaB
APS_kinase
AAA
KAP_NTPase
AAA_18
Fe-ADH
6PF2K
AAA_33
Fer4_NifH
KTI12
AAA_24
AAA_16
ATPase
ATP_bind_1
nSTAND3
NTPase_1
NPHP3_N
PIF1
NAT10_TcmA_helicase
cobW
ArsA_ATPase
ResIII
ATPase_2
GTP_EFTU
nSTAND6
CLP1_P
DUF6079_5th
Thymidylate_kin
YqeC
TsaE
PRK
TK
AAA_28
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AXK49497
UniProt:
A0AAD0QK68
LinkDB
All DBs
Position
complement(1602380..1603732)
Genome browser
AA seq
450 aa
AA seq
DB search
MFDSITGSLKGIIGKIRHQDDVASLNRATSELKKAFLKADVHHKTTKDLLNSIEIETKKL
GIGQNNFIKVLKQELERVLTANGNQGFVFASTPPTVILMTGLQGSGKTTTTGKLANYLKV
RNKKVMVVACDLQRLAAVEQLRQIANQIDVEIYFDENEKNPIKIAKAAVEKAKKEHFDVV
LVDTAGRLAIDEELMDELKDIKNGINPNEIFYVADSMTGHDATKTAITFKEKIGIDGVVL
SKYDGDTKGGVALSIASQVEVPLRFIGIGEKMPDLEVFIPDRIVSRLLGLGDIAGLAEKT
STIFDEKKAKEVSKKIKKGEFNFNDFLEQLSMMSKLGSLKSIIGMIPGLSSAMPALKDMD
FENSVEIKRIKALISSMTPKERENPDLLNPSRKKRISSGAGLSEVQVNKILKQFKSASKM
AKQLSSKGGMKGLHNMLSQVGANGMPKIPR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgattcaataacaggttcgttaaaaggaataataggaaagattagacatcaagat
gatgtagcatcgttaaatcgtgctacatctgagctgaaaaaagcttttctaaaagctgat
gttcatcataaaactacaaaagatttactaaactctattgaaattgagacaaaaaagtta
ggaattggacaaaataacttcataaaggtattaaaacaagagctagagagagttttaaca
gcaaatggaaatcaaggttttgtatttgcttcaacacctccaactgttattttaatgaca
ggacttcaaggaagtggaaagacaacaacgactggaaaattagcaaactatttgaaagta
agaaataaaaaagttatggtagttgcttgtgacttacaaagattagcggcagttgaacag
ttaagacaaattgcaaatcaaattgatgttgagatatattttgatgagaatgaaaaaaat
cctataaaaattgctaaagctgcagttgaaaaggcaaaaaaagagcattttgatgtagtc
ttagtagatactgctggacgacttgctattgatgaagagcttatggatgagctaaaagat
attaaaaatggtataaacccaaatgagatattttatgttgcagactcaatgacaggccat
gatgctacaaaaactgctatcacattcaaagaaaaaattggaattgatggggtagtttta
tcaaaatatgacggagatacaaaaggtggagtggccctaagtattgcttctcaagttgaa
gttcctttaagatttattggtattggtgaaaaaatgccagacttagaagtttttattcca
gatagaattgtttcaagacttttggggcttggggatatcgctggtttagctgagaaaaca
tcaacaatttttgatgagaaaaaagcaaaagaagttagcaaaaaaatcaaaaaaggtgag
tttaactttaatgattttttagagcaactatctatgatgagtaaattaggtagtttaaaa
tcaattattggaatgataccaggattaagtagtgcaatgccagctttaaaagatatggat
tttgaaaactctgttgagataaaaagaattaaagcacttatttcatctatgacaccaaaa
gagagagaaaatcctgatttactaaatcctagtcgaaaaaagagaatctcaagtggagca
ggacttagtgaagttcaagtaaataagattttaaaacagtttaagagtgcttcaaagatg
gcgaaacagctttcaagtaaaggtggaatgaaaggtttacataatatgctttctcaagta
ggagcaaatggaatgccaaaaattccaagataa
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