Amborella trichopoda: 105421327
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Entry
105421327 CDS
T02990
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
atr
Amborella trichopoda
Pathway
atr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105421327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
105421327
Ubiquitin system [BR:
atr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105421327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
105421327
NCBI-ProteinID:
XP_011626632
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagaccttgactggaaagaccatcactctcgaggtagagagctct
gacaccatcgacaatgtaaaggcaaagatccaggacaaggaaggcatcccccctgaccag
cagagattgatttttgctggaaagcaattggaagatggacgtacacttgctgattataac
atccagaaggagtccacactccaccttgtcctcaggctcaggggtggtatgcagatcttt
gttaaaaccctaactgggaaaaccatcaccctggaggttgagagctctgacaccatagac
aatgtaaaggcaaagatacaggacaaggaaggcattccccctgaccagcagagattaatt
tttgctggaaagcaattggaggatggccgtactcttgctgactataacatccaaaaggag
tccacactccaccttgtcctcaggctcaggggtggcatgcaaatcttcgtcaaaacccta
actgggaagacaatcacccttgaggtcgagagctcagatactattgacaatgtaaaggcc
aagatccaggacaaggaagggatccctcccgatcagcaaaggctcatctttgctgggaag
cagttggaggatggtcgcactcttgcagattacaacattcaaaaggagtctacccttcac
ttggtgctcaggcttcgaggcggcatgcaaatttttgtgaagaccctcactggtaaaacc
atcactttggaggttgagagttcagacactattgataatgttaaggccaagatccaggac
aaggagggaatcccccctgaccagcaaaggttgatttttgccggtaagcaattggaagat
ggccgtaccctcgccgactataatattcagaaggagtccacactccatctggtgcttagg
cttcgtgggggtatgcagatctttgttaaaaccctgactggaaagaccattaccctggag
gttgagagctcggataccattgataatgtcaaggcaaagatccaggacaaggaagggatc
cctcccgaccaacagaggctcatcttcgctggtaagcaattagaggatggtcgtactctc
gcggactacaacattcaaaaggagtccaccctccacttggttctcaggcttcgtgggggt
atgcaaatttttgtcaagaccctgactggtaagacgatcacattggaggttgagagctcg
gacaccatcgataatgtgaagtcaaagattcaggacaaggaaggcatccctcctgaccag
caaaggctgatctttgccggcaagcaattggaggatggaaggactctggctgattacaat
atccagaaggagtccaccctccatttggtcctcaggttgaggggtggcatgcagattttt
gttaagactcttactggaaagaccattacccttgaggtggagagctccgataccattgac
aatgtcaaggcgaaaattcaggacaaggagggcatcccaccagaccagcagaggctcatc
tttgctgggaagcagcttgaagatgggaggacccttgctgattacaatatccagaaggag
tccacccttcatctcgtcctgcgacttcgtggtggtaattga
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