Amborella trichopoda: 105421655
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Entry
105421655 CDS
T02990
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-like
KO
K08770
ubiquitin C
Organism
atr
Amborella trichopoda
Pathway
atr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105421655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
105421655
Ubiquitin system [BR:
atr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105421655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
105421655
NCBI-ProteinID:
XP_011628127
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLXLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaagaccctcactgggaagaccattactcttgaggtcgagagctcg
gacactatcgataatgtgaaggccaagattcaggataaggagggaatcccccctgatcag
cagaggctcatctttgctggtaagcaacttgaggatggcagaactcttgctgattacaat
atccaaaaggagtccacactacacttggtgctcaggcttcgtggggggatgcagatcttt
gtcaagaccctcactgggaagaccattactctcgaggtcgagagctctgacactattgac
aacgtgaaggccaagattcaagacaaggagggtattcctcctgaccagcaaagactaatt
tttgctggtaagcaactcgaggatggtcggactcttgccgactacaacatccagaaagag
tctactctccatttggtgctcaggcttcgtgggggcatgcaaattttcgtcaagaccttg
actggcaagaccattaccctggaggttgaaagctcagatacaattgacaacgtgaaggct
aaaattcaagacaaggagggtattccccctgaccagcaaaggctaatttttgctggtaaa
cagcttgaggatggaaggacccttgctgactataatatccagaaagagtctactcttcac
ttgngtctcaggcttcgtgggggcatgcaaatttttgtcaaaaccttgactggcaagacc
attaccttggaggttgagagctcggatacaattgataacgtgaaggccaaaattcaagat
aaggagggaatcccgcctgaccagcagaggcttatttttgctggcaaacagcttgaggat
ggccggacccttgccgactacaatatccagaaggagtccacactccatttggtgttgagg
ctccgtggaggaatgcagatttttgttaagaccctgaccggcaagaccattactcttgaa
gtggaaagctcggataccattgacaatgtgaagacgaagatccaagacaaggaggggatt
ccacctgatcagcagaggttgatctttgctggtaagcagctcgaggatggtcgtaccctg
gcggactacaatatccagaaggagtccaccctccatttggtgctccgccttcgtgggggt
cagtaa
DBGET
integrated database retrieval system
