Amborella trichopoda: 18429197
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Entry
18429197 CDS
T02990
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
atr
Amborella trichopoda
Pathway
atr03030
DNA replication
atr03410
Base excision repair
atr03420
Nucleotide excision repair
atr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
18429197
03410 Base excision repair
18429197
03420 Nucleotide excision repair
18429197
03430 Mismatch repair
18429197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atr03032
]
18429197
03036 Chromosome and associated proteins [BR:
atr03036
]
18429197
03400 DNA repair and recombination proteins [BR:
atr03400
]
18429197
DNA replication proteins [BR:
atr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
18429197
DNA Replication Termination Factors
ELG1-RFC complex
18429197
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
18429197
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
18429197
Check point factors
HRAD17(Rad24)-RFC complex
18429197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
DNA_pol3_delta2
DNA_pol3_delta
AAA
RuvB_N
Rad17
AAA_19
AAA_22
Bac_DnaA
RsgA_GTPase
AAA_11
RHH_4
Motif
Other DBs
NCBI-GeneID:
18429197
NCBI-ProteinID:
XP_020520162
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MNPNGTKAVRTQPPIPRAHSEPTISKNTPTRLRRVRVSNRPPKLTEAGLKELNRKNDPSP
YYHGLTDSGLDISRLRQAGSSPSRASHGSSSTSSSFSTVFLKLQELGSSCFTAKAKGRKG
RKLGANEEKPLREKDFKAVHNVKERESVTVEKVQMIGKIVVKGGVLGEEEPLRESDLTEV
HDVKERESVMVEKAQIIEKIVEKGKVLGEEAEERQKEKRFVWADIYRPKALKDFICNKMQ
AQFLQQVTNQQLCSHFIFEGPPGVGKKTMIRALLRDALGPEKIKTRVEQREFELKGASLN
NIKVKVLASPQHVELKLSDMHGYEKHVIVALIKETRNMTQNQSMNWDQTQCKVIVLHEAD
MLSTDAQHYIRWLMDHYKGGNKIFFCCNDSTNLHPISSVGTTIKLEPPTNDEIVQVLEYI
AKQEGIELPHQLAKRIAECSKQNLRQAIRSFEASWRAQSPTPFKEDHVILTGWEDDIMSI
ARHIIEEQSPKQLYLIRGKLQTLIHHNVSLEYIFSILVGELKQNLGKKFHPKVDSLYHEY
NRDNIYQLEGGRSLVQQCNLVEELSKRNDDPTRKTTRNFVKIEEFVARLMSLLNKAYTTQ
NLEGIQTSVQRGT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctaatggaaccaaggctgttcgaacccagccacctattcctcgagcacactcc
gaacccaccatctcaaaaaacacccccaccaggctcaggagggtcagggtttcgaaccga
ccaccaaaactcaccgaagcaggcctgaaagagctcaaccgaaagaacgacccaagccct
tactaccatggtctaactgactcaggtctcgatatcagtcgcctcagacaggcgggctcg
agcccgagtcgagccagccatggaagttcctccacatctagctcgttctcgactgttttc
cttaagttacaggaactgggttcttcttgctttacggcaaaggctaaggggagaaagggg
agaaagttgggggctaacgaagagaagccattgagggagaaagattttaaggcggttcat
aatgtgaaggagagagaaagtgttacagtggagaaggtgcagatgatagggaaaatagtg
gtgaaaggtggggttttgggagaggaggagccattgagggagagtgatttgacggaggtt
catgatgtgaaggagagagaaagtgttatggtggagaaggcgcagataatagagaaaata
gtggagaaaggtaaggttttgggagaggaggcagaggagaggcaaaaggagaagaggttt
gtttgggctgatatctatcgcccaaaggccttgaaggacttcatatgcaacaagatgcag
gctcagtttctgcaacaagtgacaaatcaacaactctgctcccactttatatttgagggt
cctccaggggtcggcaagaaaaccatgatcagggctttactacgcgatgccttgggacct
gaaaagataaagacaagggtcgagcaaagagaattcgaattgaagggagcgtccttaaac
aacatcaaggtaaaggtacttgcatcgcctcaacatgttgagttgaagctctcagacatg
cacggttatgaaaagcatgttatcgttgctcttataaaggaaacacgtaacatgacacag
aatcaatccatgaattgggaccaaacacaatgtaaagtaattgtccttcatgaggcagac
atgctctctactgatgcacaacattatattcgttggcttatggaccactataaaggaggc
aataaaattttcttttgttgcaatgattccacgaaccttcatcctataagttctgtcggc
acaactattaagcttgaaccaccaacaaatgatgagatagtccaagttttggagtatatt
gccaagcaagagggaatagagttacctcaccaattggcaaaaaggattgctgagtgttca
aagcagaatctacgccaagcaataaggtcctttgaagccagttggagagctcaatcccca
actcctttcaaagaagaccatgttattcttactgggtgggaagatgatataatgagcata
gcaagacatataattgaggagcaaagtccaaaacaactatatttaatacgcggaaagctc
caaaccctcatacaccataatgtctcattggagtatatattcagtatcttagtgggggag
ctgaagcaaaatttgggcaagaagttccaccccaaggtggatagcttataccacgaatac
aatcgggataacatctatcaactggagggaggaagaagcctagtccaacagtgcaacctt
gttgaagaactaagcaaaaggaatgatgaccccacaagaaaaactacaaggaatttcgtc
aaaatcgaagaattcgtggcaaggcttatgagcttgttgaataaggcatacaccacacaa
aatctagaaggcattcaaacttcagtgcagagaggtacttaa
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integrated database retrieval system
