Amborella trichopoda: 18437056
Help
Entry
18437056 CDS
T02990
Name
(RefSeq) transcription factor SPEECHLESS isoform X2
KO
K20558
transcription factor SPEECHLESS
Organism
atr
Amborella trichopoda
Pathway
atr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
18437056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18437056
Transcription factors [BR:
atr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
18437056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
18437056
NCBI-ProteinID:
XP_006847338
UniProt:
W1PMA5
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MGHILPEFFDPEFSSTASSPENLFSILEALDNAPETSLELPLRNFALPALKEAVSSLEKK
AVFRSDVSESETDTEKAPCRKKLKMSAAKGTEMEETAGEGGQRISHITVERNRRKQMNEH
LTVLRSLMPCFYVKRGDQASVIGGVVDYINELQQVLQSLEARKQRKVYSEVLSPMPASSP
RPALSPRIPISPRTPQPSSPYRTRVITPPYLSPSSSHEMPPTLENVSELAANSKSPVADV
EVKFSGANVLLKTVSHRIPGQVLKIITALEDLSLEILHLSINTIEETMLNSFTIKIGIEC
ELSAEELAHEIQRTFC
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgggccatattctccctgaattcttcgatcctgagtttagttcgactgcgagctcccct
gaaaacctctttagcatccttgaagccctagataatgcaccggaaacctctttggagttg
cctttaaggaattttgctctaccggctttgaaagaagcagtatcctcattggagaagaaa
gcagttttccgttctgatgtgtcagagtctgagactgacacggagaaggcaccgtgccgt
aaaaagctgaagatgtcggcagctaaaggaacggaaatggaggaaacggcaggagaaggg
gggcaaaggatttcacatataactgtggagaggaataggaggaaacagatgaacgagcac
ttaacagtgttgcgatctcttatgccttgtttctatgtcaaaagaggagatcaggcatcg
gtgataggaggagtagtggactacatcaatgaactccaacaagttcttcaaagtctagag
gccagaaaacagagaaaagtttacagtgaagtcctgagcccaatgccagcctcaagtcct
agaccagcccttagtcctcgcatacccattagcccaagaactcctcaaccttcaagtcca
tacaggactagggttattacaccaccctatctctctccttcgtcctcccatgaaatgcct
cctacattggaaaatgtatcagagcttgctgctaactcgaaatcgccggttgccgatgtt
gaggtgaaattctcgggggcaaatgtcctcctaaagacggtatcacacaggattcctggc
caagttctaaagattatcaccgccttggaagatctctccctggaaatactgcacctaagt
atcaacacgatagaggagaccatgctcaactcttttacaattaagatcggaattgaatgt
gagctgagtgctgaggagctggcccatgaaattcaaagaacattctgctaa
DBGET
integrated database retrieval system
