Amborella trichopoda: 18439571
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Entry
18439571 CDS
T02990
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
atr
Amborella trichopoda
Pathway
atr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
18439571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atr04121
]
18439571
Ubiquitin system [BR:
atr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
18439571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
PAS_9
Kelch_1
Kelch_6
F-box-like
PAS
F-box
NANM
PAS_3
PAS_4
Motif
Other DBs
NCBI-GeneID:
18439571
NCBI-ProteinID:
XP_006849803
UniProt:
A0A126X2I1
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MGELCTGGKRLRSGQCTEEKEEKNFSLKPGIFFYPTPSAFVVTDALDPDHPIIYVNTIFE
LFTGYRADEVLGRNCRFLQYRDPFAQRRHPLVDPVVVSEIRKCLEEGIEFQGELLNFRKD
GTPLVNRLRLSPIHNDDGIVTHILGIQIFSEANIDIDRLSYPVFKQTSCHHPNEVNTDSF
YYLQAPNSHGHPCRHICGILQLSDEVLSQNILARLSPRDVASVGLVCRRLRQLTKNEHLW
KMVCQNAWGREATGILESIPVTKRLGWGRLARELTTLEAAAWKKLTVGGAVEPSRCNFSA
CAAGNRLVLFGGEGVNMQPMDDTFVLDLDSANPEWRRVKVSSTPPGRWGHTLSCLNGSWL
VVFGGCGSQGLLNDVFVLDLDAQQPAWKEVLGIAPPLPRSWHSSCTVDGSKLVVSGGCTD
AGVLLSDTFLLDLTVDKPMWREIPTSWTPPSRLGHTLSVYDGKKILMFGGLAKSGPLRLR
SNEAYTIDIEEEEPRWRQHSGTGFPSVGSQSAIAPPPRLDHVAVSLPCGRSIIFGGSVAG
LHSASQLFLLDPREEKPTWRMLNVPGQQPKFAWGHSTCVVGGTRVLVLGGNTGEEWILNE
LHELSLVSKPEMDPEMMTSNH
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggagagttatgcacaggagggaaacgcttgaggagcgggcagtgcactgaggaaaag
gaagagaagaacttctcccttaaaccaggaatatttttctatcctaccccttcagccttt
gtggtcactgatgctttggaccctgaccaccccatcatctatgtgaacaccatcttcgag
ctcttcaccggttacagagcagatgaggttctaggaagaaattgccgtttcttacaatat
agggaccccttcgcacaaaggcgacaccccttggtggaccctgtggtcgtctcagagata
cgtaaatgccttgaagaagggattgaattccaaggggagctcctcaatttccgaaaggat
ggaactcccctagtgaacaggctaaggctgagtcctatacacaatgatgatggcatagtg
acccacatactcggtatccaaatattcagtgaagcaaacattgacatagaccgattatcc
tacccagtcttcaagcaaacatcttgccaccaccccaatgaagtgaacactgattctttc
tactatctccaagcacccaatagccatggtcacccttgtcgccacatatgtggaattctt
cagctctctgatgaagttctatcacaaaatatcttggcccgcctgtcacctagagatgtg
gcatcagttggtttggtgtgtcgaaggcttcgccagctaacgaaaaatgagcatttgtgg
aagatggtgtgtcaaaatgcatggggaagagaggcaaccgggatcttagagtcaattcct
gttactaaaagattgggttggggccgtttagctagagagctcactacattggaagcagca
gcttggaagaagctcacagttggtggtgctgtagagccttcaagatgcaactttagtgct
tgtgcagctggtaatcgactggttctctttggtggagagggggttaatatgcagcctatg
gatgatacttttgtgctcgatcttgattcagccaatccagaatggcgaagagttaaggtc
tcatcaaccccacctggtcggtggggccacacactctcatgtttgaatggctcatggctt
gtggtttttgggggttgtggaagtcaaggacttctaaacgatgtatttgttttggactta
gatgcccaacaaccagcttggaaagaggttttaggtattgcacctccccttccaagatca
tggcatagctcttgcacagtcgatggctcaaaactagttgtttcgggtggctgcactgat
gctggagtgctcttaagtgatacattcttgttggatctcacggtggacaagcccatgtgg
agggagatacccacatcttggaccccgccctctaggctagggcacacgctttctgtctac
gatggtaagaagatactgatgtttggtggtctagcaaagagtgggcctcttcgtttgaga
tctaatgaggcatacacaattgatattgaagaggaagagccaaggtggaggcaacatagt
ggaactgggtttcctagtgttggtagccagagtgccatagcacctcctcctagacttgac
catgttgcagtgagcttgccttgtgggaggagtatcatatttggaggttcggttgctggt
ttgcactcagcttctcagctctttcttcttgatccaagagaagagaaaccaacatggagg
atgttaaatgttcctggtcagcaaccgaaatttgcgtggggtcacagcacctgtgtggtt
ggaggaactagagttttggtgttaggtggtaacactggtgaagagtggatattgaatgag
ctccatgagttatcgttggtgagcaaaccagagatggatccggagatgatgaccagtaac
cattaa
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