KEGG   Amborella trichopoda: 18442371
Entry
18442371          CDS       T02990                                 
Name
(RefSeq) splicing factor SF3a60 homolog isoform X1
  KO
K12827  splicing factor 3A subunit 3
Organism
atr  Amborella trichopoda
Pathway
atr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18442371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atr03041]
    18442371
Spliceosome [BR:atr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    18442371
 Complex B
    18442371
 Complex C
   U2 SnRNP specific factors
    18442371
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N Transposase_24
Other DBs
NCBI-GeneID: 18442371
NCBI-ProteinID: XP_006852652
UniProt: W1Q0M4
LinkDB
Position
Unknown
AA seq 509 aa
MSSTVLERTRCAHEEIERLERLAVKDLQHEPSTTRERLFQNHRVRGFVDNIIHTTDELIE
LYDDKDNLRKDEIAALGGQTASGQNVFSSFYDRLKEIREYHRKFPVARVVEAPDDEESLK
EEPYIEFSGEEAFGRYLDMHGLYNEYINSKFGEKIEYSAYLDVFPQTHKIPLNLKLTRQY
REYLDHVLDYLTSFFQRTEPLQDVDRIFSKVEAEFEERWADGNVHGWEGKGLENGNSTNQ
GAIIDLDYYDNADELVSLGPKKLKEALAALSLKSGGTVQQRAERLFLTKHTPLEKLDRKH
FAKGSTHVIEQNNAATHSQHISTCKDMALTEVKMQRLCELLDETIVRTKENVEKKQALTY
EEMEAEREEEEVQAESESDEDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAKVLWEKIQERQGVNKWR
PELEEEYEDKDGNIYNKKTFTDLRRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcttcgactgtgcttgaacggactagatgcgctcacgaggaaatagagcggcttgag
cgcctcgctgttaaggacttgcagcatgagccatcgaccaccagagagagattgtttcag
aaccatcgagttcgtggttttgtcgataacattattcacactaccgatgaactgattgag
ctctacgacgacaaggataatcttaggaaagatgagattgctgctcttggaggtcaaact
gcaagtgggcagaatgtgttcagctccttctatgacagattgaaagagatacgtgaatac
cataggaagtttccagttgcacgtgttgttgaggcaccggatgatgaagaatcactcaaa
gaagaaccatatattgagttcagtggcgaggaagcttttggtcgataccttgacatgcat
gggctttacaatgagtatataaactccaagtttggcgagaaaattgagtattctgcatat
ctagatgtatttccacaaactcataagattcccctcaatttgaagctaaccagacagtac
agagagtatttggatcatgtccttgattacctgacaagtttctttcagcgcactgaaccc
ttgcaagatgttgatagaatattttcaaaggttgaggctgaatttgaagagcgctgggca
gacggtaatgtgcatggatgggaaggcaaaggtctggaaaatgggaactccacaaatcaa
ggggccatcattgatcttgattattatgataatgccgatgagcttgtttcactaggcccc
aaaaaattaaaagaggcattagcagctctcagtttgaaatcaggtgggacggttcaacag
cgtgctgaaaggcttttccttacaaagcatacacccctagagaagcttgacagaaagcat
tttgcaaaaggttccacccatgtcatagaacagaataatgcggctacccattcacaacac
attagcacctgtaaagatatggctttgacggaagtcaagatgcaacggctctgtgaattg
ttggatgagaccattgtgcggaccaaggaaaatgtggaaaagaaacaggccctgacctat
gaagaaatggaggcagagcgtgaagaggaagaagtccaagctgagagtgaaagtgatgaa
gatgagcaacagatttataatcctctaaaattgcctatgggttgggatggaaagcccatt
ccatattggttgtataagctccatggtcttgggcaggaattcaaatgtgaaatatgtggg
aaccacagctactggggacgtcgagcatttgagcgacatttcaaagagtggcgccatcag
catggtatgcgttgtttaggtataccaaacaccaagaacttcaatgagattacatcaatc
aaggaagcaaaggttctgtgggagaaaatacaagagcggcaaggcgttaacaagtggagg
ccggaacttgaagaggagtacgaggataaagatggcaacatatacaataagaagacattc
actgacttgcgacgccagggccttatttaa

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