KEGG   Amborella trichopoda: 18444897
Entry
18444897          CDS       T02990                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
atr  Amborella trichopoda
Pathway
atr03060  Protein export
Brite
KEGG Orthology (KO) [BR:atr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    18444897
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:atr02044]
    18444897
Enzymes [BR:atr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     18444897
Secretion system [BR:atr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   18444897
  Eukaryotic Sec-SRP protein
   18444897
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA AAA_16 AAA_30 ParA cobW APS_kinase CLP1_P nSTAND3 ArsA_ATPase NTPase_1 ATP_bind_1 AAA_24 ATPase 6PF2K AAA_31 AAA_19 MeaB AAA_18 AAA ResIII Thymidylate_kin AAA_17 KAP_NTPase AAA_33 IMPDH KTI12 AAA_14 AAA_25 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 18444897
NCBI-ProteinID: XP_006855113
UniProt: U5D2Y5
LinkDB
Position
Unknown
AA seq 582 aa
MEAFSMATLGSCHFSASSLSSSLKLLTPFSLSTNPNGSFCSPRNPERPIASSFLSSLSLG
SSSRNTFTREIWGWVYSKISIVKKERRLIVRAEMFGQLTSSLEAAWTKLRKEDVLTKDNF
VEPMREIRRALLEADVSLPVVRRFVQSVSDQAVGVGLIRGVRPDQQLVKIVHDELVKLMG
GEVSELVFAKSGPTVILLAGLQGVGKTTVCAKLALYLKKQGRSCMMVAADVYRPAAIDQL
SILGEQVDVPVYTAGTAIKPSEIARQGLKEAKQKNIDVVIVDTAGRLQIDKAMMDELKEV
KQTLDPTEVLLVVDAMTGQEAAALVTTFNIEIGITGTILTKLDGDSRGGAALSVKEVSGK
PIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKF
DFNDFLKQTRAVAQMGSMTRVIGMIPGMAKVTPAQIREAEKSLKIMEAMINAMTPEEREK
PELLAESPARRKRVAMDSGKTEQQVSQLVAQLFQMRVRMKNLLGAVEGGSIPALSNLEES
LKAERKVPPGTARRRRNKSETRRQFADSASVRPGPRGFGSKT
NT seq 1749 nt   +upstreamnt  +downstreamnt
atggaagctttttccatggctacacttggttcctgccatttctctgcatcatcgctttct
tcctctttaaaactacttaccccattttctctgtctacaaaccccaatggaagcttttgt
tctccgagaaaccctgaaagaccaatcgcctcatcatttctctcatctctctcgcttggg
tcttcatcaaggaacacattcacaagagagatatggggctgggtttatagcaaaatctca
attgttaagaaggaaaggcgtttgattgtgagagcagagatgtttggccagttgacgagc
agtctagaagctgcctggacaaaactcagaaaggaagatgttttgaccaaggacaacttt
gttgagcctatgcgagagattaggagagctcttttggaggcggatgtaagccttccagtt
gtgaggagatttgttcagtctgtcagtgatcaggcagttggtgttggtttgattcgagga
gtgagacctgatcaacaattagtgaagattgtgcatgatgaattagtaaaactaatgggt
ggagaagtatctgagctcgtttttgcaaagtcgggtcctacagttatactgttggcaggt
ttacaaggtgttgggaagactactgtttgtgctaagttggccttgtatctcaagaaacag
ggaaggagttgcatgatggttgctgctgatgtgtatagacctgcagccattgatcaactt
tctattttaggtgaacaggtggatgtgcctgtttatacagcaggaacagcaataaagcca
tcagaaatagctcgacaaggtctcaaggaggccaagcagaagaatattgatgttgtgatt
gtggatacagctggaagactgcaaatagacaaggccatgatggatgagttgaaggaggtg
aaacagacattggatcccactgaagttttgcttgtggtagatgcaatgactggtcaagaa
gctgcagcattagtcacaacattcaacattgaaattggaattaccgggaccattctaaca
aaactggatggagactctcgaggtggagcagctttgagtgtcaaagaggtttcaggaaag
ccaataaagcttgtagggcgtggtgagcgtatggaagacctcgagcctttctaccctgat
cggatggctgggcgtatattaggaatgggagatgttctgtcattcgtagaaaaagcacaa
gaagttatgagacaagaagatgctgaggaattgcagaagaagataatgagtgcaaaattt
gattttaatgacttcttaaagcaaactcgtgctgttgcccaaatgggttcgatgacccgt
gtcattggaatgattccaggcatggcaaaggtaacccctgcacaaattcgtgaggcagag
aaaagcttaaaaataatggaggccatgattaatgccatgacacctgaggaaagagagaaa
cctgaattgctggcagaatcccctgctaggagaaagagagttgcgatggattctgggaag
actgaacagcaggtaagccaacttgttgctcaactcttccaaatgcgtgtacgcatgaaa
aacttgcttggagccgtggagggggggtctattcctgcactaagcaatcttgaggaatca
ctcaaagcagaacgaaaggtgcctcctggcactgcacgaaggagaaggaacaaatcagaa
acaaggagacaatttgccgattcagcttcagtgagacctggccctaggggatttggttca
aaaacttga

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