KEGG   Amyelois transitella (navel orangeworm): 106129645
Entry
106129645         CDS       T09957                                 
Name
(RefSeq) sodium channel protein para
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
atra  Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:atra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:atra04040]
    106129645
Ion channels [BR:atra04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   106129645
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel IQ_SCN5A_C GPHH PFF1_TM Zip
Other DBs
NCBI-GeneID: 106129645
NCBI-ProteinID: XP_060804533
LinkDB
Position
16:complement(join(5937385..5937957,5938047..5938250,5938373..5938677,5938760..5939030,5939112..5939357,5939463..5939657,5939813..5939935,5940866..5940988,5942270..5942443,5942525..5942793,5942889..5943030,5943118..5943233,5943512..5943634,5944804..5945008,5945097..5945284,5946476..5946638,5948776..5948949,5949140..5949393,5951056..5951121,5951235..5951334,5951488..5951696,5952011..5952254,5955169..5955477,5955811..5955975,5957185..5957329,5957536..5957593,5958122..5958334,5959159..5959250,5959481..5959609,5960309..5960511,5961065..5961220,5963626..5963772))
AA seq 2027 aa
MSEDLDSISEEERSLFRPFTRESLAAIEARIAEEHAKQKELEKKRAEGEVRYDDEDEDEG
PQPDATLEQGLPLPVRMQGSFPLELASTPLEDIDPFYHNQRTFVVISKGKDIFRFSATNA
LFLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVESTEVIFTGIYTFES
AVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAI
VPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKVFPEDGSWGN
LTDENWERFCQNETNWYGGDGEYPLCGNSSGAGQCEPGYICLQGYGPNPNYGYTSFDTFG
WAFLSAFRLMTQDYWENLYQLVLRSAGSWHVLFFVVIIFLGSFYLVNLILAIVAMSYDEL
QKKAEEEEQAEEEALREAEQKAAARADKQEAREAHAREQAAAAEAAAYAEAHPAKSPSDY
SCQSYELFVNQERGNQDDNTRERMSLRSDPFADSVSTQPTHKPTEQHHDSARRPRKVSMA
SLSLPGSPFNLRRGSRGSHQMALRPNGRPRYPPGADRKPLVLSTYLDAQEHLPYADDSNA
VTPMSEENGAIIIPVYYANLGSRHSSYTSHQSRLSYTSHGDLLGNNKAQTKEARLRGRSA
SRNHSVTSQPHAYPLPRQDSSLATRPLREYEPECTDEAGKVLKPSNDNPFIESSQQPNVV
DMRDVMVLNEIIEQAGRQSRASDHNAEEDEDGPTFKEKLLECFMKGIDVFCVWDCCWLWL
EFQKYVALLVFDPFVELFITLCIVVNTLFMALDHHDMDRDMEKALKSGNYFFTATFGIEA
MLKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPT
LNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYVDYVDRFPNGELPRWNFTD
FMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGS
SSLSTPTADQDTNKIAEAFNRISRFIDWTKRNVADFLKLLKNKLTNQIAIHAPERVDNEL
ELGADLDDAVLYKDKKLKDQVEVAIGDGMEFTIPGDNKYKKGKILMNNINAITDNHRDNR
LDCELNHHGYPIQDDDTISQKSYGSHKIRSFKDESHKCSTDTIDGEEKKDASKEELGLEE
EMIEEEEDKIDGILGKTDIVVAADEDVVDDTPADCCPDPCYQKFPFLAGDDESPFWQGWG
MLRLKTFRLIENTYFETAVITMILLSSLALALEDVHLPHRPILQDILYYMDRIFTVIFFI
EMLIKWLALGFQKYFTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLR
AMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDLNHTTLS
HEIIPDRNACILENYTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVGRQP
IRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNA
MKKMGSKKPLKAIPRPKWRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSDTFS
NVLDYLNMIFIVIFSSECLLKIFALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFV
SPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMS
FFMHVKDKGGLDDVYNFKTFVQSMILLFQMSTSAGWDGVLDGIINEEECDLPDNERGSPG
NCGSATIGITYLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQR
FDPDGTQYIRYDQLSDFLDVLEPPLQIHKPNKYKIISMDIPICRGDMMFCVDILDALTKD
FFARKGNPIEDPGDIEVGRPDEVGYEPVSSTLWRQREEYCARLIQHAWRRHRRAGAGDSP
GGGSGAGAGADTAVLLDAVTPNGHRVVLQAAGAAPRPPEPAPPPAPV
NT seq 6084 nt   +upstreamnt  +downstreamnt
atgtccgaggacttggactcgatcagcgaggaagaacgaagcttgttccgacccttcaca
cgagagtcactggccgctatcgaagcccgcatagctgaggaacatgccaagcaaaaggaa
ctcgagaaaaaacgagcggaaggcgaggtgcgttacgatgacgaggacgaagacgaaggg
ccgcagccggacgcgaccttggagcaggggctgcctctgcccgtgcgcatgcagggctcc
ttcccattggagctcgcctccacgcccctcgaggacatcgaccccttctatcataatcaa
agaaccttcgtagtcataagcaagggtaaagatatcttcagattttcggccaccaacgcc
ctatttctagacccattcaacccaataagaagagtggcgatatacatattggtgcatcca
ctattctctctgtttatcatcactacgatcttagtaaactgcattcttatgataatgccc
accacaccgactgtcgaaagtactgaagttatctttaccgggatctacacctttgaatct
gcggtgaaagtaatggccaggggtttcatactacagccattcacataccttagagatgca
tggaattggcttgacttcgtagtaatagctttagcttatgtgacgatgggaatagatttg
ggcaacttggccgcgctcaggacgttcagggtactgcgagcgctgaagactgtggccatc
gtaccgggattgaagaccatcgttggagccgtgatagagtccgtaaagaatctgcgagac
gtgatcatcctgactatgttctctctgtcagtcttcgcgttgatggggctgcagatctac
atgggggtactgacgcagaagtgcatcaaggtgttccctgaagacggctcctggggcaac
ctcacggacgagaactgggaacgattctgtcagaacgaaacgaactggtacggaggggat
ggggagtacccattgtgtgggaattcatcgggcgcggggcaatgcgaaccaggctacatc
tgcttgcaaggctacggtccgaaccctaattatggctacaccagctttgataccttcggt
tgggccttcctctccgccttccgccttatgacccaggactactgggagaatctgtatcag
ttggtattaagatcagcggggtcgtggcacgtattgttcttcgtggtaatcatcttcttg
ggctccttctatctcgtgaacttgatcttggctatcgtcgccatgtcatacgatgagttg
caaaagaaggccgaagaagaagagcaagccgaagaggaggctctgagggaagctgaacag
aaagcagccgctcgcgccgacaagcaagaagcgagagaagcgcacgcgcgcgagcaagcg
gcggctgcagaagcggccgcgtacgcggaagcgcatcccgccaagtctcccagcgactac
tcctgccagagctacgagttgtttgtgaaccaggagcgcggcaaccaggacgacaatacg
cgggagagaatgtccctccgtagcgaccccttcgcggactcggtgagcactcagcccacg
cacaagcccaccgaacagcaccacgacagcgcacgccggcccaggaaggtcagcatggct
tcattatcgctgccgggatcaccttttaacttgcggcgagggtcacgaggttcacatcaa
atggctctgcggccgaatggaagacctcggtatccaccaggggcggatcgtaaaccactg
gttctgtcgacgtatctggatgctcaggaacacttgccgtatgccgacgattccaatgcc
gttactccgatgtccgaagaaaatggtgctatcattatccctgtgtattatgcgaattta
ggatcaagacattcttcatacacgtcccatcaatcgcggctgtcgtacacgtctcacggg
gatttgctgggtaacaacaaggcacagaccaaagaggctagactccgaggtcggtcggct
tcgcggaaccatagtgtgacgtcacagcctcatgcctacccactgcccaggcaggactct
tcactcgctaccagaccacttcgagaatatgagccagaatgtacggacgaggctggcaaa
gtcttaaaaccttccaacgacaatccctttattgagtcttcgcaacagcctaacgtagta
gacatgagagatgttatggttctgaacgaaatcatcgaacaagctggcaggcagagtcga
gcaagcgatcacaacgcggaagaggatgaagatgggccgacgttcaaagagaagcttctg
gaatgtttcatgaaggggatagacgtgttctgtgtttgggactgctgttggttgtggctg
gagtttcaaaagtatgtcgcgttgctggtgtttgacccgttcgtggagttgtttatcacg
ctgtgtattgtggtcaacacgttgttcatggcattggatcatcacgatatggacagagat
atggagaaggcgctcaagagcggcaattattttttcactgctactttcggtattgaagct
atgttgaagttaatagcaatgagtccgaaatattatttccaagaaggatggaatattttt
gactttatcatcgtggccttatcacttttggagctggggctcgaaggagttcagggtttg
tcagttttgcgttcctttcgtttgcttcgagtattcaaattggcaaagtcatggccgaca
cttaatttactcatctctataatgggtaggacaatgggtgccttgggcaacctgaccttc
gtattgtgcatcattattttcatatttgccgtgatgggtatgcaactgttcgggaaaaat
tacgtggattatgtggaccggttcccaaatggagagttaccaaggtggaacttcacagat
ttcatgcacagtttcatgatcgtgtttagagtgctctgcggagaatggatagaaagtatg
tgggactgtatgttggtgggagacgtctcatgtatacccttcttcttggctactgtcgtt
atcggaaatcttgtggtacttaacctcttcttggccctgttactgtcaaattttggttcc
tcgagcttatcaacaccaactgctgatcaagatactaacaaaatagctgaagccttcaac
cggatatcaaggttcattgactggacgaaacgaaatgttgctgacttcttgaaattgcta
aagaacaagttgactaatcagatagctatacacgctcccgaacgagtggacaacgaactt
gaacttggtgcagatctggatgatgctgttttgtacaaagacaagaaactaaaggatcaa
gtagaagtagccataggcgatggaatggaatttacgataccaggagacaataaatataaa
aagggaaaaatattaatgaataacattaatgctataacagataatcatagagacaaccga
ttagactgcgaattaaatcatcatggatatccaatccaggatgatgatacaattagtcaa
aaatcgtatggtagccataaaattaggtcatttaaagatgaaagtcacaaatgttctaca
gacacaatagatggagaagaaaaaaaagatgctagcaaagaagaattaggtttagaagaa
gaaatgattgaagaggaagaagataaaatagacggtattcttgggaagacagatattgta
gtggcagctgatgaagacgtagtagacgatacaccagctgactgctgccctgacccatgt
taccagaaattcccatttttggcgggagacgatgagtcacccttctggcaaggctggggg
atgctcagattaaagactttcagacttattgagaacacctactttgaaacggctgtgata
actatgattttgctcagtagtttggctttggcgctagaagatgtccatttacctcatcga
ccgattcttcaagacatcttgtattacatggatcgaattttcactgtaatctttttcatc
gagatgttaatcaagtggcttgctctcggcttccagaaatacttcacaaacgcttggtgt
tggctcgatttcatcattgtcatggtctcgcttataaacttcgtagcggcgctttgtggc
gccggaggcattcaggcgttcaaaacgatgcgaacgctccgcgcactgcgcccgctcaga
gccatgagccgcatgcagggcatgagggtggtggtgaacgcactggtgcaagcgattcca
tccatcttcaacgtgcttctcgtgtgcctcatcttctggctaatctttgcaatcatgggg
gtccaactcttcgctggaaaatattttaagtgtgtcgacttaaaccatacaactctgagc
catgaaattataccagatcgaaacgcttgtattctcgaaaactatacttgggaaaactca
ccgatgaacttcgatcacgtcggcaaggcatacttgtgcctgttccaagtggctacattc
aagggctggattcaaatcatgaacgatgctatcgattctagagaagttggtcgtcaacca
ataagagagacaaatatttacatgtacttatactttgtattctttattatatttggctca
ttcttcactcttaatctatttatcggagttatcatcgacaatttcaacgaacagaagaag
aaagcaggtggtagtctcgagatgttcatgacagaagatcagaagaaatactacaatgct
atgaaaaaaatgggttccaaaaagcctttgaaagctataccgagacctaagtggcgtcca
caagctatagtgtttgaaattgtgaccgataagaaattcgacatgatcattatgttgttc
atcggtttgaacatgttgactatgacccttgaccactaccaacagtcagatacatttagc
aatgtactcgactacctcaacatgatattcatagtaatatttagttcagagtgcctattg
aaaatattcgccttacgataccattatttcgtcgagccatggaatttgtttgattttgtc
gtcgtcatgttttctattctaagtttggtgttgagcgatatcattgaaaaatattttgta
tcaccaactctcttgagagtagtaagagtagcaaaagtcggccgagtgcttcgattggtg
aaaggcgccaaaggcatccggacgttactgtttgcgctagctatgtcactgccagctcta
tttaatatctgcctcctgttgttcctcgtcatgtttatctttgcgatattcggcatgtca
ttcttcatgcatgtaaaggacaaaggagggttagatgacgtatacaacttcaaaactttc
gtccagagcatgattctgctattccagatgtcaacatccgccggctgggacggtgtgtta
gatggcatcattaacgaagaggaatgtgatctgccagacaacgagcgtggctcgcccggc
aactgcggctccgctaccatcggcatcacatacctgctctcctacctcgtaatatctttc
cttattgttatcaacatgtacatcgctgtcattctcgagaactactcgcaggcaactgaa
gatgtacaagaaggtctcacggacgacgactacgatatgtattacgagatttggcaacgt
ttcgatccagacggaactcagtacattcggtacgaccaattgtcggatttcctcgacgta
ctcgagccgccgttgcagatccacaagccaaacaagtacaaaattatttccatggacata
ccaatatgtcgcggcgatatgatgttctgcgtagatatcctcgatgcacttacgaaagac
ttcttcgcgaggaagggcaacccaatcgaagatcccggtgatatcgaggtcgggcgaccg
gatgaagtcggctacgagccggtgtcatcgacgctgtggcgtcagcgagaagaatactgc
gcacggctgatccagcacgcgtggcggcggcacaggcgagcgggcgcgggtgattcgccg
ggcggcggcagcggggcgggcgcgggcgcggacacagcagtgctgttggacgccgtgacg
cccaacggccaccgcgtggtgctgcaggcggcgggagcggcgccgcggccgcccgagccc
gcgccgccgcccgcgcccgtctga

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