KEGG   Amyelois transitella (navel orangeworm): 106136376
Entry
106136376         CDS       T09957                                 
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106136376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:atra03041]
    106136376
Spliceosome [BR:atra03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106136376
 Complex B
    106136376
 Complex C
   U2 SnRNP specific factors
    106136376
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd zf-met
Other DBs
NCBI-GeneID: 106136376
NCBI-ProteinID: XP_013192360
LinkDB
Position
10:complement(join(6462429..6462562,6463108..6463309,6463872..6464064,6464343..6464471,6464671..6464831,6465123..6465344,6465453..6465544,6466015..6466087,6466545..6466703,6467157..6467204,6467790..6467885))
AA seq 502 aa
MDTILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEATIRLKDL
YEDKDGLRKEEISALSGPNEFQEFYSRLKQIKEFHRKHPNEICVPMSVEFEELAKLRENP
AEDFTTPVEFTDEEGYGKYLDLHECYEKYINLKGIEKVDYITYLSIFDHLFDIPRERKNG
EYRNYIRALLTYLKDFVSRVKPLQDQAQEMALAHQEFLKQWEAGTFPGWPKETGGALTNV
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFITKGQTALDKSLVA
KKGANKAKASTQQRHKDIAAIEAQVYRFASIVSSTRAATIENVTRRAARAAGERRDDSGD
ESDASAAPDIDSDDDEVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYTCEICGNYTYKGP
KAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDALALWEKIKHQKESERFVAENDEEF
EDSQGNVVNRKTYEDLKRQGLL
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggatacaatactagaacaacaacgaagttatcatgaagagagagaacgtaccatggat
gctatggtaaaagaaatactgcacaaaaaaactggtcaccgagagacaatcaatgctgat
caccgactgaaaaatctgcatgatagatacatagaagcaacaataagactcaaggatcta
tatgaagacaaagatggtttgagaaaagaagaaatctctgctctgtctggccctaatgag
tttcaggaattttattctaggttgaagcaaattaaggagtttcataggaaacatcctaat
gagatatgtgtgccaatgtctgttgaatttgaggagttggcaaagcttagggaaaaccca
gcagaagattttacaactcctgtagagtttactgatgaggaaggctatggaaaatacttg
gatttgcatgaatgctatgaaaaatatataaatttaaaaggaattgagaaagtagactac
ataacctacctcagtatatttgaccacctgtttgacattccaagggaacgtaagaatgga
gaatacaggaactacatccgagcattgcttacatacctgaaggactttgtgagtagagtg
aagccgttgcaagatcaggcccaggaaatggcgcttgctcatcaagagtttcttaagcaa
tgggaagctggaacatttccaggctggccgaaagaaacaggcggtgccttaacaaatgtt
ggtgcccatttggatctgtcagcattttcgtcttgggaagagttagcatcgttaggtctg
gatagattaaagtctgctctcatggcccttgggttgaagtgtggtggaactttagaagaa
agagctcaaaggttatttatcacgaaaggccaaacagccctagataagtcattggtcgca
aagaaaggcgcaaacaaagctaaagcatctactcaacaaaggcataaagatattgctgct
attgaagctcaagtttatcggttcgcaagcatagtgagcagtacaagagcggcgaccata
gagaatgtgacgcgtcgtgcggctcgcgcggccggcgagcgcagagacgacagcggagat
gaaagtgacgcttcagccgcgcctgatatcgactctgacgatgacgaagtgccgtacaac
cctaagaatctgccgctgggctgggatggcaagcccatcccatactggctgtacaagctc
cacggtctgaatatcagctacacttgtgaaatctgcggtaattacacttacaaagggccc
aaggcgttccaacggcacttcgcagaatggcggcacgctcacggcatgcgttgtcttgga
ataccaaacactgctcactttgctaacgtcacgcagattgaggatgccctagcgttgtgg
gagaaaattaaacaccagaaggagagcgagagatttgtcgccgaaaatgacgaagaattt
gaagattctcagggcaatgttgtgaacaggaaaacttacgaagacttgaaacgccaagga
cttctgtaa

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