Amyelois transitella (navel orangeworm): 106137594
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Entry
106137594 CDS
T09957
Name
(RefSeq) protein crooked neck
KO
K12869
crooked neck
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106137594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106137594
03036 Chromosome and associated proteins [BR:
atra03036
]
106137594
Spliceosome [BR:
atra03041
]
Complex B
Other components
Prp19-related factors
106137594
Complex C
106137594
Chromosome and associated proteins [BR:
atra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106137594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
BSD
Motif
Other DBs
NCBI-GeneID:
106137594
NCBI-ProteinID:
XP_060804060
LinkDB
All DBs
Position
15:complement(join(1978460..1980061,1980341..1980497,1981310..1981425,1981877..1982062,1982145..1982183))
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AA seq
699 aa
AA seq
DB search
MEGKPTKMPKVAKVKNKAPAEIQITAEQLLREAKERDLEILPPPPKQKISDPEELRDYQH
RKRKAFEDNIRKNRLVIGNWLKYAQWEESQKQVQRARSIYERALDVDHRNVTLWLKYTEM
EMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWQPDEQA
WQTYINFELRYKELERARQIYERFVMVHPDVKNWIKYARFEENHGFINGSRKVYERAVEF
FGDEELDERLFIAFAKFEENQKEHDRARVIYKYALDHIPKDKNKELYKAYTIHEKKYGDR
SGIEDVIVNKRKYMYEQEVIENPTNYDAWFDYIRLVENESNPEDIRDTYERAIANVPPSK
DKQFWRRYIYLWINYALYEELEAEDIERTRQVYRTCLELIPHKIFTFSKIWLMYAQFEVR
CKDLKQARKTLGMALGMCPRDKLYRGYIDLEIQLREFDRCRILYQKFLEYGPENCITWIK
FAELETLLGDIDRARAIYEIAVGQPRLDMPELLWKSFIDFEVSQGETELARQLYERLLER
TVHVKVWLSYAKFELNAENPDNINIELARRVYERANDSLRSAGEKESRVLLLEAWKDFET
EIGDEIKLEKVLSKMPRRVKKRQKIVSEDGIEEGWEEVFDYIFPEDEMVRPNLKLLAAAK
QWRKQKEVTEEPDGEKETEDVQQDQTESFTPPLDNENSN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaaacccacaaaaatgccaaaagtggcaaaggtgaaaaacaaagcgccagcg
gagatacaaattactgctgaacagcttctaagagaagctaaggaaagagatttggaaata
cttccaccgccgccgaaacagaaaatatccgaccccgaggagcttagagactatcaacat
cgtaaacggaaagcatttgaggataacattcgaaaaaacaggcttgtgataggtaattgg
ttgaagtacgcacaatgggaggagtcacaaaagcaggtgcagcgagctcgctcaatttac
gagcgggctctggacgtggaccacagaaatgttaccttgtggctgaaatatacagagatg
gagatgcgcaacaggcaagtaaatcacgcaaggaacctgtgggacagagccgttacgatc
ctgccgagggtttctcagttctggtacaagtacacttatatggaggaaatgttggagaat
gtggccggagctagacaagtgtttgaaagatggatggaatggcagccagatgagcaggcg
tggcagacatacatcaattttgaactgcgctataaagagttggagagggcacgacaaata
tacgaaaggtttgtaatggtccaccctgatgttaaaaactggataaagtatgccagattt
gaagaaaatcatggattcatcaatggttcaaggaaagtatatgaaagagctgttgaattc
tttggagacgaggaattagacgaaagactattcatagcattcgcgaaatttgaggagaat
caaaaagaacatgacagggcaagggttatatacaaatatgctttagatcatattccaaag
gataaaaataaagaattgtacaaagcgtacactatacatgagaagaaatatggggacagg
tctggtattgaagatgtcatagtcaacaagaggaaatacatgtatgagcaggaagtcata
gagaatcctactaactatgacgcgtggtttgactatatcaggcttgtggaaaatgaaagc
aatcctgaggacatcagggatacttatgaaagagccattgcgaatgtaccaccttccaaa
gacaaacaattttggcgccgatacatttacttatggatcaattatgctttatatgaagaa
ttagaggcagaagacatcgaaagaacgagacaagtatacagaacatgtttagaattgata
cctcataaaatatttactttttcaaaaatatggttgatgtatgcccaatttgaagttaga
tgtaaggatctgaaacaagctcggaaaactctggggatggctttgggtatgtgtccgaga
gataaattgtatagaggatacattgacttggagatccaattgagggaatttgacagatgc
agaatattgtaccaaaagtttttagaatacgggccagaaaactgcataacttggatcaaa
tttgccgagttggagacgttgttaggagatattgatagagccagggcgatatatgaaatt
gctgtgggacaaccacggttagacatgcctgagctcttgtggaagagttttattgatttt
gaagtgtctcaaggagaaaccgagctagccagacagttatatgaaagactgctagaaaga
actgttcatgtgaaagtatggctctcatatgctaaatttgagttgaacgctgagaaccca
gataacatcaatatagaattagctagaagagtgtatgaaagggctaatgatagccttcgt
agtgctggtgagaaggagtccagagtgttgcttttggaagcctggaaagatttcgaaact
gaaattggggacgaaattaaacttgagaaggtactgtcgaaaatgcctaggagggttaaa
aagagacagaagattgtcagtgaggatggaattgaagaaggttgggaggaagttttcgat
tatattttcccagaggatgaaatggtaagaccgaacttgaaacttcttgccgctgctaaa
caatggcgaaaacagaaagaagtcacagaggagcccgatggggagaaagagacagaagat
gtacagcaagatcaaacagaaagcttcacacccccattggataatgagaacagtaattaa
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