Amyelois transitella (navel orangeworm): 106141889
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Entry
106141889 CDS
T09957
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106141889
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atra01009
]
106141889
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106141889
Protein phosphatases and associated proteins [BR:
atra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106141889
Spliceosome [BR:
atra03041
]
Common components
Common spliceosomal components
SR proteins
106141889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_3
PHM7_cyt
Scm3
Motif
Other DBs
NCBI-GeneID:
106141889
NCBI-ProteinID:
XP_060803269
LinkDB
All DBs
Position
13:complement(join(1448236..1448261,1451439..1451578,1452259..1452315,1453321..1453493,1454190..1454318,1455009..1455032,1457751..1457898,1460942..1461075,1461178..1461192))
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AA seq
281 aa
AA seq
DB search
MSDRERSRSRTRNGSREPVPKAPVMSRGHSRSRSRTPPPPKTSSRKYRSPTRSRSGSPRR
GYRSRYSRSRSRSYSPRGSYRRSHSHSPMSSRRRHMGDRSKQTAHLVENPTPSRCLGVFG
LSLYTTEQQINHIFSKYGNVDKVQVVIDAKTGRSRGFCFVYFENQEDAKLAKNECTGMEI
DGRRIRVDFSITQRAHTPTPGIYMGKPTSVSSRGDNGYDRRGGRDREDYYYRGGGGGYRE
REREYYHRGYRHRSPSPHYRRSRRVERERSYSPRIETRSKG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcgagagaggagccgttcaaggaccagaaacgggtctcgcgagccggtaccg
aaggctccagtaatgtctcgtggtcatagtcgcagccggtccaggactcccccgccgcca
aagacctcaagcagaaaatacaggagcccgactcgttcccggtcgggctcccctcgccgc
gggtaccgctcccggtattcgcgcagccggagccgctcgtactcgccccggggatcctac
aggcgctcgcactcccacagcccgatgtcttcgcgccgccgccatatgggagacaggagc
aagcagacagcccacctcgtggagaacccgacaccttcgagatgtctcggagtgtttgga
ctaagcttgtatactacagaacagcaaattaaccacattttctcaaaatatggcaatgtg
gataaagtacaagttgtcattgatgctaagaccggccgttcacgcggtttttgtttcgta
tacttcgagaaccaagaagacgccaagttggcgaagaacgaatgcaccggcatggagata
gatggcagacgtatcagagtggacttctccatcacacaacgagcgcacactcccactcct
ggcatctatatgggcaagcccacaagcgtgagcagcagaggcgacaacggttacgacagg
cgaggcggcagggacagagaggactactactaccgcggcggcggcggcggctaccgcgag
cgcgagcgcgagtactaccaccgcgggtaccggcaccgctcgccgtcgccgcactaccgc
cgctcgcgccgcgtcgagcgcgagcgctcctactcgccgcgtattgaaacaagaagtaaa
ggatga
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