Agelaius tricolor (tricolored blackbird): 139586447
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Entry
139586447 CDS
T10815
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04141
Protein processing in endoplasmic reticulum
atrc04210
Apoptosis
atrc04217
Necroptosis
atrc04218
Cellular senescence
atrc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139586447 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139586447 (CAPN1)
04217 Necroptosis
139586447 (CAPN1)
04218 Cellular senescence
139586447 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139586447 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atrc01002
]
139586447 (CAPN1)
Enzymes [BR:
atrc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
139586447 (CAPN1)
Peptidases and inhibitors [BR:
atrc01002
]
Cysteine peptidases
Family C2: calpain family
139586447 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
DUF6009
Motif
Other DBs
NCBI-GeneID:
139586447
NCBI-ProteinID:
XP_071275922
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MAEPPVVPVFCTGVSAQVRRQRAKELGLGRHDNAVRYLGQDFERLLQECRGSGALFRDPA
FPPAASSLGFRELGPGSSKTRGVQWKRPTELCPRPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETLLHRVVPHGQSFQQGYAGIFHFQIWQFGEWLDVVVDDFLPTKDGKLLFVHS
AEGSEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWFDLRRPPADLYQIILK
ALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGAKQIPYRGQALELIRMRNPWGE
VEWTGAWSDGSAEWHAVEPALRQQLMVKMEDGEFWMSFRDFLREFTRLEICNLTPDALQS
RKFRKWNTQLYDGTWRRGSTAGGCRNYPATFWINPQFKIQLEEVDDDRDEDGGREPGCSF
LLALMQKHRRRERRYGKDMETIGFAVYEVAGSYVGRSGVHLKREFFLANASRARSEQFIN
LREVSTRFRLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDKIQATLPDEKVLR
ESEIDENFKQLFRQLAGPDLEISVTELQTILNRIIAKHKDLRTKGFSLESCRSMVNLMDK
DGNGKLGLVEFNVLWNRIRNYLSIFRKFDLDKSGSISAYELRLALEAAGYRLNKRLHELL
ITRYAEPDLALDFDSFVCCLVRLETMFRFFQAMDVDQDGVVTFDLLQWLQLTMFA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgccggtggtgccggtgttctgcacgggcgtctcggcgcaggtgcggcgc
cagcgcgccaaggagctggggctgggccgccacgacaacgccgtgcgctacctgggccag
gacttcgagcggctgctccaggagtgccgcggctccggggccctgttccgggaccccgcc
ttccccccggccgcctcctccctgggcttccgcgagctgggccccggctcctccaagacg
cgcggcgtgcagtggaagaggcccacggagctgtgcccgcgcccgcagttcatcgtggac
ggcgccacgcgcaccgacatctgccagggagcgctgggtgactgctggctgctggcggcc
atcgcctcgctgacgctcaacgagacgctcctgcaccgcgtggtgccgcacgggcagagc
ttccagcagggctacgccggcatcttccacttccagatctggcagtttggcgagtggctg
gacgtggtggtggacgatttcctgcccaccaaggacgggaagctgctcttcgtgcactcg
gccgagggctccgagttctggagcgcgctgctggaaaaggcctacgccaaggtcaacggc
tgctacgaggctctgtcgggcggcagcacctccgagggcttcgaggacttcacgggcggc
gtcaccgagtggttcgacctgcgccggcccccggccgacctctaccagatcatcctcaag
gcgctggagcgcggctccctgctgggctgctccatcgacataacaagcgccttcgacatg
gaggcggtgaccttcaagaagctggtgaagggccacgcctactcggtgaccggtgccaag
cagatcccgtaccgcgggcaggccctggagctcatccggatgcgcaacccctggggagag
gtggagtggacgggtgcctggagcgacggctcggccgagtggcacgcggtggagccggcg
ctgcgccagcagctcatggtcaagatggaggacggcgaattctggatgtccttccgggat
ttcctgcgggagttcacccgcctggagatctgcaacctcaccccggacgcgctgcagtcc
cgcaagttccgcaagtggaacacgcagctctacgacgggacgtggcggcgcggcagcacc
gccggcggctgccgcaactaccccgccacgttctggatcaacccccagttcaagatccag
ctggaggaggtggatgatgacagggacgaggacggcgggcgtgagccgggctgcagcttc
ctgctggcgctgatgcagaagcaccggcgccgcgagcgccgctacggcaaggacatggag
accattggattcgctgtctatgaggtagcggggtcatacgtggggaggtcgggcgtgcac
ctgaagcgggagttcttcctggccaacgcgtcgcgcgcgcgctccgagcagttcatcaac
ctgcgcgaggtgagcacgcgcttccgcctgccgcccggcgagtacatcgtggtgccctcc
accttcgagcccaacaaggagggcgacttcgtgctccgcgtcttctccgagaagaaagcc
ggcaccgaggagatggacgacaagatccaggccacgctgccagacgagaaagtgctgagg
gagagtgaaatcgatgagaacttcaagcagctcttcaggcagctggcggggccggacctg
gagatcagcgtcaccgagctccagaccatcctcaaccgcatcatcgccaaacacaaggat
ctgcgcaccaagggcttcagcctggagtcctgccggagcatggtgaacctgatggacaaa
gacgggaacgggaaactggggctggtggagttcaacgtgctctggaaccgcatccgcaac
tacctgagcatcttccgcaagttcgacctggacaagtctggctccatcagtgcctacgag
ctgcgcctggccctggaggctgcagggtaccggctgaacaagaggctgcacgagctgctc
atcacccgctacgccgagcccgacctggccctggacttcgacagcttcgtctgctgcctc
gtgcgcctggagaccatgttccggtttttccaagccatggacgtggaccaagacggggtc
gtcacgttcgacctgctgcagtggctccagctcaccatgttcgcctga
DBGET
integrated database retrieval system
