Agelaius tricolor (tricolored blackbird): 139593724
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Entry
139593724 CDS
T10815
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139593724 (SCN2A)
Ion channels [BR:
atrc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139593724 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
139593724
NCBI-ProteinID:
XP_071291098
LinkDB
All DBs
Position
Unknown
AA seq
2018 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRINEEKAQKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISIFNSSI
GENGTFINATMTIFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPALPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEVMIDKAATASNGTTTETDLRKRHSSSYHVPMDYLTDPSARQRAMSI
ASMLTNTMEELEESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFD
GFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAV
ARIQKGIDYVKRKVREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTIVDIGKNLAY
LKDGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESD
LEESKEKLNASSSSEGSTVDIGLPPEGEQPEAEPEEVLEPEACFTEGCVRRFKCCQVSVE
EGKGKIWWNLRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCV
NTTTDERFDISQINNFSQCEELIQNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNVLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVT
MMVETDDQSEEMENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSG
EPDCDPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAYRRHLLRQKVKKVSCIFSQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTP
STTSPPSYDSVTKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacccgacagcttccgcttcttcacaagagaa
tcccttgcagctattgaacagcgtatcaatgaagagaaagctcaaaaatccaaacaagaa
cgcaaagatgatgatgatgaagatggcccgaagccaaacagtgacttggaggcaggaaag
accctgccatttatttacggcgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattaaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacgtttctccgtgacccatggaattggctagatttcactgtcattaca
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagactattgtaggagcc
ctgattcagtctgtgaagaagctctcagatgtcatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaacaaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttccatctttaatagctctata
ggtgaaaatggaacatttattaatgcaacaatgacaatatttaactgggatgaatacatc
gaagacaaaagtcatttctacttcttggaaggacaaaatgatgcactgctctgtggcaat
agctcagatgcaggtcaatgcccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgacactgcgtgctgctgggaagaca
tacatgatattttttgttttggtcattttcctgggttctttctacctaattaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaacaatggaagaagcagag
cagaaagaggcagaatttcagcaaatgctggaacaactgaaaaagcagcaggaagaagct
caggcggcggcagcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaagctgagctcaaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcagaaagaacagtctgaaggcgaggagaaggat
ggggaagaatttcacaaatcagaatcagaggacagcatcaaaaagaaaggtttccgattt
tccattgaggggaatagactgacatatgaaaagagattctcttccccacaccagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacaagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaacgagagcagaagagactctctctttgttcctcatagacacggagaa
aggcgcaacagcaacatcagccaggccagtaggtcatccagaacagtccctgcacttcca
gcaaacgggaagatgcacagcactgtggactgcaatggagtggtgtcgttagttgggggg
ccgccagctttgacatcgcctacaggacagcttctgccagaggtgatgattgataaagca
gccactgctagcaatggcactactacggaaactgacttaagaaagagacattctagctct
taccatgttcctatggactacctaacagaccctagtgcaaggcaaagagcaatgagtata
gccagcatgcttacaaacacaatggaagaactggaagaatccagacagaaatgtccacca
tgctggtataaatttgctaacacttgcttgatttgggactgctgtactccctggctgaaa
gtcaaacatattgtaaatttgattgtgatggacccatttgttgatctggccattaccatc
tgcatcgtcctgaacaccctgttcatggccatggagcactacccaatgacagaacagttt
agtggtgtgctttcagtaggaaaccttgtgtttactggaattttcacagcagaaatgttt
ctcaagataattgccatggatccttattattatttccaagagggctggaatatttttgat
ggttttattgtgagtcttagtttaatggaacttggccttgcaaatgtagaaggattatct
gtccttcgatcgttccgattgcttcgagttttcaaattggcaaaatcttggccaacccta
aatatgctgattaagattattggcaactcagtgggggctctggggaatctgaccctggtg
ctggccatcattgtgttcattttcgctgtggttgggatgcagctctttgggaagagctac
aaggaatgcgtctgcaagatctccagtgactgtgaactgcctcgctggcacatgcacgac
tttttccactctttcctgattgtattccgagtgctgtgtggagaatggattgaaaccatg
tgggactgcatggaggttgcaggccaaactatgtgccttacagtcttcatgatggtcatg
gtgattggaaacctagtggtactcaacctatttctggccttgctgcttagctcatttagt
tcagacaaccttgctgctaccgacgacgataatgaaatgaacaatctccagattgctgtg
gcaaggattcagaaaggcatagattatgtgaagagaaaagtgcgtgaattcatccaaaaa
gcctttgttagaaaacagaaagctttagatgaaatcaaacctcttgaagacctaaacaat
aaaaaagacagctgtatttccaaccatacaatagtagacataggtaaaaaccttgcctat
ctcaaggacgggaatggaaccaccagtggcataggcagcagtgtggaaaaatatgttgtt
gatgaaagtgattacatgtcattcataaacaacccaagtctcacggtgacagtgcccatt
gctgttggagaatcagattttgaaaatttaaacacagaggagttcagcagtgagtcagac
ctggaagaaagcaaagagaaattgaatgcatccagttcatcagaaggcagcacagttgat
attggactacctccagaaggtgaacagccagaagcagaaccagaagaagttctagagcca
gaagcttgttttacagaagggtgtgtacggagattcaaatgctgtcaagtcagtgtagaa
gaaggaaaggggaaaatctggtggaatcttaggaaaacctgctataagattgttgaacac
aactggtttgagaccttcatagtcttcatgattcttctcagcagcggtgctctggcattt
gaagatatctacatagagcaacgtaaaactatcaagaccatgctggaatatgctgacaaa
gttttcacctatatcttcattctggaaatgcttttaaaatgggttgcttatggctttcaa
acctatttcactaatgcatggtgctggctggacttcctgattgttgatgtctctttggtt
agcttaacagctaatgccttgggctactcagaacttggtgcgattaaatcccttaggaca
ctaagagctttgagacctctaagagccttgtcgcgatttgaagggatgagggttgtggtg
aatgcactgttaggagcaattccatctattatgaatgtgcttcttgtttgccttatattc
tggctgatatttagtatcatgggagtaaatctatttgctggaaagttttactactgtgtt
aacactacaactgatgagagatttgatatcagccaaattaacaactttagtcagtgtgag
gagctcatacaaaacaatgaaactgcccgctggaagaatgtgaaggtcaactttgacaat
gtaggccttggttacctttctctgctccaagtggctacatttaaaggatggatggatatc
atgtacgcagctgtggattctcgtaatgttttggatcagcccaagtatgaagataacctg
tacatgtatctttactttgtcatctttatcatctttggatcgttttttaccttgaacctt
tttattggtgtcatcatagacaatttcaaccagcagaaaaagaagtttggaggtcaagac
attttcatgacagaagaacagaagaaatactacaatgcaatgaaaaaattgggttcaaag
aaaccacaaaaacctatacctcgaccagcaaacaaattccaaggcatggtctttgatttt
gtaaccaaacaagcatttgatatcagtatcatgatacttatctgccttaacatggtcaca
atgatggtagaaacagatgatcagagtgaagaaatggaaaacattttatattggattaac
ctggtgtttatcgtacttttcactggagaatttgtcctgaaattgatttcacttcgtcat
tactacttcactataggttggaatatttttgattttgtggttgtcattctctccatagta
ggtatgtttttggctgagatgattgagaagtactttgtatctcccacactattcagagtc
atccggcttgccaggatcggtcgaatcctgcgcctcattaaaggcgctaagggaatccgc
actctgctttttgctttgatgatgtctcttcctgctttgttcaacattgggctgctgctc
ttcctggtcatgttcatctatgccatatttggcatgtccaactttgcctacgtcaagagg
gaagttgggattgatgacatgttcaactttgaaacgtttggcaacagcatgatctgcctg
ttccagatcaccacgtccgctggctgggacggtttgctcgccccaattctcaacagtggg
gagccagactgtgacccccataaagatcatccagggagctctgtgaaaggtgactgtggc
aacccttctgttgggattttcttctttgtcagctacattatcatatcctttctggtagtg
gtgaacatgtacattgctgtgattttggagaacttcagtgttgctactgaagaaagcgct
gaacccttgagcgaggatgactttgagatgttctatgaagtctgggagaagtttgacccc
gatgcaacacaattcatagagttcagtaaattatcagattttgccgcttcattagatcca
cctcttctcatagcaaaacctaacaaagtccagcttattgcaatggatctgcccatggtg
agtggtgacagaattcactgccttgacatcttgtttgctttcacaaagcgtgttttgggg
gaaagtggggagatggacgccctcagaatacagatggaagatcggtttatggcagccaat
ccttctaaagtctcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtg
tctgctgtcatcattcagcgtgcttacagacgtcatctcctgaggcaaaaagtcaaaaaa
gtatcatgtatatttagtcaggataaaggtaaagaggaagatgatctgcccatgaaagaa
gatatgattatggataaactaaatgagaactccactccagaaaaaacagatatgacccca
tccacaacctccccaccttcttatgacagtgtaacaaagccagacaaggataaatatgaa
aaagacaagtcagaaaaagaagataaaggtaaagacagcagggaaagtaaaaagtaa
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integrated database retrieval system
