Agelaius tricolor (tricolored blackbird): 139593728
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Entry
139593728 CDS
T10815
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139593728
Ion channels [BR:
atrc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139593728
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
139593728
NCBI-ProteinID:
XP_071291112
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQEHTDGDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINIISYFNSTM
NENGTFVNLTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQTTAAVAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRLTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGHAKDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMIPALPVNGKMHSTVDCNGVVSL
VGGPSTLTSPTGQLIPEVIGTTTETEIRKRRLSSYQISMEMLEESAARQRAMSIASILTN
TMEELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNT
LFMAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSL
SLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEV
AGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKG
IDYVKKKIQEFIRKAFIRKQKSLEEIKALEELNNKKDSCISNHTAVEISKDLNYLKDGNG
TTSGVGTGSSVEKYVIDENDYMSFINNPGLTVTVPIALGESDFENLNTEEFSSESDMEES
KQKLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIEDGKG
KTWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTY
IFILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRAL
RPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTT
GEMFDISDVNNYTQCVELIKSNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAA
VDSRDVKDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPVNKFQGMIFDFVTKQVFDIGIMILICLNMVTMMVE
TDDQSKEMETILSRINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFL
AEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDC
DPHKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLS
EDDFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDR
IHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVI
IQRAYRRHLLRVKVKQVSSIYNRNKNKEGDGHIIKEIIIDKLKGNSTPEKTDESSSTTSP
PSYDSVTKPDKEKYEKDKAEKNYKGKDIRENKK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccacctggacctgaaagcttccgctattttactagagat
tctctcgcagctattgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catacagatggtgatgatgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtgtctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataaaggaaaagcaatt
ttccgattcagtgccacgtctgccttgtatattttaactccttttaatcccatcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcacttatcaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagatccatggaactggcttgacttcagtgtcatttta
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagactattgtaggagcc
ctgattcagtctgtgaagaagctctcagatgtcatgatcctgactgtattttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgagataaacattatttcctactttaacagcacaatg
aatgaaaacggtacttttgttaacctgacagtgagcacgtttaactggaaggattacatt
gaggatgaaactcatttttacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcaatgcccagaaggatatatatgtgtgaaagctggcagaaacccc
aattatggctacacaagttttgacacattcagctgggcttttttgtccctgtttcggcta
atgactcaggacttctgggaaaacctctatcagctgacactgcgtgctgctgggaagaca
tacatgatattttttgttctggtgatttttctgggctctttctatctgataaacctgatc
ctggctgtggtggccatggcctacgaagaacagaaccaagcaacaatggaagaagcagag
cagaaagaggcagaatttcagcaaatgctggaacaactgaagaagcaacaagaagaagct
cagacaacagcagcagtagcagcggcatcagtggcatcaagagatttcagtggtgtaggg
ggattaggagaactcctggaaagctcttcagaagcatcaaagttgagctcaaagagtgct
aaagaaagaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaagcagaggac
aaaggagatattgataagttccccaagtctgagtcagaagacagtatcagaaggaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggctcacttctcctcac
cagtctttgttaagcattcgtggttctctgttctcaccaagacgcaacagcaaaaccagc
attttcagtttcagaggtcatgcaaaggatataggatctgaaaatgactttgctgatgat
gaacacagcactcttgaagacaatgagagcagaagagattctctctttgttccaaatcga
catggagagaggcgcaacagtaacattagtcaggccagtgtgtcgtctagaatgatacca
gcccttccagtgaatgggaagatgcacagcactgtggattgcaatggagtagtttccttg
gttggaggaccttcaactctgacttcacctactggtcagcttataccagaggtaattggc
accactacagaaacagaaataaggaaaagaagactgagttcatatcaaatttccatggaa
atgctggaagagtctgctgcaagacaaagagcaatgagcatagccagcatacttacaaat
acaatggaagaacttgaagaatccagacagaaatgcccaccatgctggtacagatttgca
aatactttcttgatctgggattgctggagtccatggttaaaagtaaagcatgtcgtcaat
ttagttgtgatggatccatttgttgatcttgctataactatttgcattgttttaaacacc
ttgtttatggccatggaacattacccaatgacagaacagtttagcagtgtcctttctgtg
gggaacctggtattcactgggatatttacagcagaaatggtactaaagattattgccatg
gacccttactattatttccaggaaggatggaatatttttgatggtattatcgttagcctt
agtttaatggagctgggtcttgcaaatgttgaaggattatctgttcttcggtcattcaga
ttgcttcgagttttcaaattggcaaaatcttggccaaccctaaatatgctgattaagatt
attggcaactcagtgggggctctggggaatctgaccctggtgctggccatcattgtgttc
attttcgctgtggttgggatgcagctctttgggaagagctacaaggaatgcgtctgcaag
atctccagtgactgtgtgctccctcgctggcacatgcacgactttttccactctttcctg
attgtattccgagtgctgtgtggagaatggatagaaaccatgtgggactgcatggaggtt
gctggccaaacgatgtgccttattgttttcatgctagtcatggtgattggaaacctagtg
gtattgaacctatttctggccttgctgctgagctcatttagttcagacaaccttgctgct
acagacgatgataatgaaatgaacaatctccagattgctgtggcaaggattcagaaaggc
atagattatgttaaaaaaaagatacaggagttcatccgaaaagccttcattagaaagcag
aaatctttagaggaaatcaaagcacttgaagagctaaacaacaagaaagacagctgcatt
tccaatcatactgccgttgaaataagcaaagatctgaattatctcaaagatgggaatgga
accaccagtggtgtaggcacaggcagcagtgtggaaaaatatgtaattgatgaaaatgat
tacatgtcattcataaacaacccaggcctcactgtgacagtgcccattgcacttggagaa
tcagattttgaaaatttaaataccgaagaatttagcagcgaatctgatatggaagaaagc
aaacagaaactaaatgcatcaagctcatcagaaggcagcactgttgatattgctcctcct
ggagagggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgtttt
actgaaggttgtgtacagaaatttccatgctgtcaagtaagtatagaagatggcaaagga
aaaacttggtggaatcttagaaaaacctgctacagcatagttgagcacaactggtttgag
actttcattgtattcatgattctcctcagcagtggagcactagcctttgaagacatatat
attgaacagcgcaaaactatcaagaccatgctggaatatgctgacaaagtttttacgtat
attttcattttggaaatgcttttaaaatgggtagcatacggttttcaaatatattttact
aatgcctggtgctggctggacttcctgattgttgatgtctcattggttagtttaatagcc
aatgctctgggctattctgaacttggtgccattaaatcgctacggacattaagagcttta
agacctttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgcccttgta
ggagcaatcccatctatcatgaatgtattgctggtttgtcttatattctggctaatcttc
agcatcatgggagtaaatctttttgctgggaaattctatcattgtgtcaacaccacaact
ggtgagatgtttgatatcagtgatgtcaacaattatactcagtgtgtggaactcataaaa
agcaatcaaagtgcccgatggaagaatgtgaaagtaaacttcgataatgtaggagctgga
tatcttgctctgcttcaagtagctactttcaaaggatggatggatattatgtatgctgct
gttgattcacgagatgtaaaagatcaacctaagtatgaggacaacttgtatatgtatctc
tattttgtcatctttatcatatttggatcgttttttaccttgaaccttttcattggtgtt
attatagacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgaca
gaagaacagaagaaatattacaatgcaatgaaaaaattgggatccaaaaagccacagaaa
cctataccgaggccagtgaacaaatttcaaggcatgatctttgattttgtaaccaaacaa
gtatttgacatcggcatcatgatcctcatctgccttaacatggtcacaatgatggtagaa
acagatgatcagagtaaagaaatggaaacaattttatcccggattaacctggtgttcatt
gtccttttcactggagaatttgtcctgaaattgatttcacttcgccattactacttcact
ataggctggaatatttttgattttgtggttgtgattctctccatagtaggtatgtttttg
gctgagatgattgagaagtactttgtatctcccacactattcagagtcatccggcttgcc
aggatcggtcgaatcctgcgcctcattaaaggcgctaagggaatccgcactctgcttttt
gctttgatgatgtctcttcctgctttgttcaacattgggctgctgctcttcctggtcatg
ttcatctatgccatatttggcatgtccaactttgcctacgtcaagagggaagttgggatt
gatgacatgttcaactttgaaacgtttggcaacagcatgatctgcctgttccagatcacc
acgtccgctggctgggacggtttgctcgccccaattctcaacagtggggagccagactgt
gacccccataaagatcatccagggagctctgtgaaaggtgactgtggcaacccttctgtt
gggattttcttctttgtcagctacattatcatatcctttctggtagtggtgaacatgtac
attgctgtgattttggagaacttcagtgttgctactgaagaaagcgctgaacctttgagc
gaggatgactttgagatgttctatgaagtctgggagaagtttgaccccgatgcaacacag
ttcatagaatacagtaaattatcagattttgccgcttcattagatccacctcttctcata
gcaaaacccaacaaagtccagcttattgcaatggatctgcccatggtgagtggtgacaga
attcactgccttgacatcttgtttgctttcacaaagcgtgttttgggggaaagtggggag
atggatgccctcagaatacagatggaagatcggtttatggcagccaatccttctaaagtc
tcctatgaaccaattacaaccacactgaaacgaaagcaggaggaggtgtctgctgtcatc
attcagcgtgcttacagacgtcacctcttaagggtaaaagttaaacaggtgtctagtata
tataatagaaataaaaacaaagaaggagatggacacattataaaagagataattattgat
aaactaaaaggaaactccaccccagaaaaaacagatgagagttcttctacaacttcccca
ccctcttatgacagtgtaacaaagcccgacaaagaaaaatatgaaaaagataaagcagaa
aagaactacaaaggtaaagacatcagggaaaataaaaaataa
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