Agelaius tricolor (tricolored blackbird): 139595151
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Entry
139595151 CDS
T10815
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139595151 (SMC4)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
139595151 (SMC4)
Condensin II
139595151 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
EzrA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
139595151
NCBI-ProteinID:
XP_071294264
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MEGEQPAGTVPGKSTKTSSAARGKGREPLQESSMAMEVENEGTREPDQEPPQAASDEVVD
NRSLEEILGSIPPPPPPAMTSEPGAPRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIIGP
NGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHSSDEHKDIPSCSVEVHFQKITDKEGDD
YEVIPDSKFCVSRTAYRDNSSTYYINGKKKTFRDVGVLLRSHGIDLDHNRFLILQGEVEQ
IAMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIHTLCRRVELLNEQRGEKLNRVKLVEKE
KDALEEDKNKAIEFLCLENQIFKEKNQMCQYYIHDLKKRINDLEMQKEKINEETKSINEK
SSKLAEETKTKNKALKELEKKCNKITKFIEENKEKFTQLDLQDVKVREKLKHAKSKAKKL
EKQLQKDKEKVEELQNVPSTSAKAIEDATAKKELLAKAKDKEEAKLRQVLASLQEETKGI
QKEKEGKEKELMEFSKEVTESRSSMEIAQAELELYLSKYNSALAQLSQAQEALDSTSSTL
KERKAAIKDIAGKLPQAEQQLKEKENALEKLGREESGAKDLVRNLRRKVEEAKSSLAQSR
SRGKVLEALLQQKKCGNIPGLYGRLGDLGAIDDKYDVAISSSCGALDHIVVDTIDTAQAC
VNFLKAGGIGVATFIALDKMAVWEKKTQKIPTPENVPRLFDLVKVEDPKVRLAFYFALRD
TLVAKNLEEATRIAFQKEKRWRVVTLQGQIIEVSGTMTGGGGKVMKGRMGSSVVMDISEE
EISKMESQLHRDSKRAAQREEEKSQLEEAIRKLQQEIREMRNTSEKYTASIQGFSEQEID
LKNQIKELKANVAAAAPDKTKQKELEKVLDGYKKDYERVAEKARKMEEEVKRLHQLIMDT
NNQKLKAQQDKIDKIDKEMDECSSAITKAQVAAKTADRNLKKSEEALQRTEKEMEENEKE
MEKLAAEMTTLEDKATEVMKECKQAEEALPAVQEEQKNLLQEMKMIRDAEHALQSEALSI
KLKIEQIDSHISTHQGKVKYWQKEISKLSLHAIEGEAPEQLRALSEEELEALQEPDALSK
RIALLEAQRHQLRPNLGAIAEYRSKEELYLKHVEELDNITSERDKFREAFEQLRKQRLNE
FMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYVSARGPAPWQCLLLQR
DTVATQPQAVKALGCCTCTAPPGTHRPAPNHQLLAEYTTVAGTDVSMDPRSLGFTLPCHS
HQCL
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggagcagccagcagggaccgtgccaggcaagagcaccaaaacctccagtgca
gcccgtgggaagggcagggagcccttgcaggagtcctccatggccatggaagtggaaaac
gaaggcaccagggagcccgatcaggaacctccccaagcagcctcagatgaggtggtggat
aatcgaagtttagaagagattttgggtagcatccctcctcccccacctccggcaatgacc
agtgaacctggtgctcctcgcctcatgatcacccacattgtaaaccagaacttcaaatcc
tatgcaggggagaaaactctgggaccttttcacaagcgtttctcgtgcattattgggccg
aacggcagcggcaaatccaacatcatcgattccctgctgttcgtgttcggctaccgagcc
caaaaaatccgatccaaaaagctctcggtgctgatccacagctctgatgagcacaaggac
atccccagctgctctgtggaagttcacttccaaaagatcactgacaaggaaggagatgat
tacgaagtcattcctgacagcaaattctgtgtctctagaactgcctatagagacaattcc
tccacctactacatcaatggcaagaaaaagacattcagagatgttggggtgctcctccga
agccacggcatcgacctggatcacaacaggttcttaattctccagggggaggtggagcag
attgccatgatgaagcccaaggggcagacggagcacgacgaggggatgctggagtacctg
gaggatctgatcggatccgcgcggctcaaggagcccatccacaccctgtgccgccgggtg
gagctgctcaacgagcagcgcggcgagaagttaaatcgagttaaactggtggagaaagaa
aaagatgccttggaagaggacaagaataaagccattgagttcctctgcttggaaaatcaa
atatttaaggaaaagaatcagatgtgtcaatattacatccatgacctaaagaaacgaatc
aatgacctggaaatgcagaaggagaaaattaatgaagaaaccaaaagtattaatgagaaa
agcagtaaacttgcagaggaaacgaaaaccaagaacaaagctttgaaagaacttgaaaag
aaatgcaataaaattacaaagttcatagaggaaaataaagaaaaattcacccagttggat
ttgcaggatgtgaaagtgagggagaaactcaaacacgccaagagcaaggctaaaaaactg
gagaagcagcttcaaaaggacaaggaaaaggtggaggagctgcagaacgtcccctccacg
agcgccaaggccatcgaggacgccacggccaagaaggagctgctggcaaaggccaaggac
aaggaggaggccaagctcaggcaggtcctggccagcctgcaggaggagaccaagggaatc
cagaaggaaaaagagggcaaggagaaggagctgatggagttcagcaaggaggtgaccgag
agccgctccagcatggagatagcacaggcagagctggagctctacctgagcaagtacaac
tctgccctggcccagctcagccaggcccaggaggccctggacagcacctccagcaccctg
aaggaaaggaaagctgccatcaaagacatcgctggcaaattaccccaggctgagcagcag
ctcaaggagaaagagaatgctctggagaagctgggaagggaggaatccggggccaaggat
ctcgtgcgaaacctgcgccgaaaagtggaggaagccaaaagttctttggcacagagtcgc
agccgagggaaagtgctggaggctctgctccagcagaagaaatgtgggaacatccctggc
ctctatggaaggctgggagacctgggagccatcgatgacaagtacgacgtggccatttcc
tcctcgtgtggagccctggatcacattgttgtggacaccattgacactgcccaggcctgt
gtgaacttcctgaaggctggagggattggagttgccacctttatagccctggacaagatg
gctgtgtgggaaaagaaaacacagaaaatcccaactccagagaacgtgccacggctcttt
gacctggtgaaggtggaggaccccaaggttcgcctggccttctacttcgctctcagggac
actctggtggccaaaaacctggaggaagccaccagaatagcattccaaaaggagaaaagg
tggagggtggtgaccctgcagggacaaatcatcgaggtgtcaggaaccatgactggtggg
ggaggaaaagtcatgaagggcagaatgggctcctcagtcgtgatggatatctcagaagaa
gagatcagcaagatggaatcccagctgcacagggattccaaaagagccgcgcagcgcgag
gaggagaaatcgcagcttgaggaagccataaggaaactgcagcaggagatccgggagatg
aggaacacctccgagaaatacacagcgagcatccagggattttctgagcaagaaattgat
ctcaaaaatcaaatcaaggaactcaaagccaacgtcgctgctgctgctccagacaaaacc
aaacagaaggagttggaaaaagtccttgatggttataaaaaagattatgagcgtgtggct
gagaaggccaggaagatggaggaggaggtgaagcggctgcaccagctcatcatggacacc
aacaaccagaaactgaaggctcagcaggacaaaattgataagattgacaaggaaatggat
gaatgttcctcagccatcaccaaggcccaggtggcagccaagactgcagacaggaacctg
aagaaatccgaggaggctctgcagcgcacggagaaggagatggaagaaaacgagaaggaa
atggagaaattggcagcagagatgacaacgctggaggacaaagccaccgaggtgatgaag
gagtgcaagcaggctgaggaggctttgccagcagtgcaggaggagcagaagaatttactc
caggagatgaaaatgattcgggatgctgaacatgcccttcaaagtgaagctctgagcatc
aagctgaagattgaacaaattgacagccacatttccacccaccagggaaaggttaaatac
tggcagaaagagatctccaagctgtccctgcacgccatcgagggcgaggcccccgagcag
ctgcgggcgctgagcgaggaggagctggaggcgctgcaggagccggacgcgctcagcaag
agaatcgcgctgctggaggcacagcgccaccagctccgccccaacctgggcgccatcgcc
gagtaccgcagcaaggaagagctgtacctgaagcacgtggaggaactggacaacatcacc
agtgagagggacaaattcagagaggcctttgagcagctcaggaaacagaggctgaatgaa
ttcatggcaggatttaatgtcatcaccaacaagctgaaggagaactaccagatgctcacg
ctgggaggggatgctgagctggagctcgtggacagtctggatcccttctcagagggaatc
atgttcagtgtccggccccccaagaaaagctggaagaaaatcttcaacctgtcaggagga
gagaagaccctgagctcgctggccctggtgtttgccctgcaccactacaaacccaccccc
ctctacttcatggacgagatcgacgccgccctggacttcaagaacgtctccatcgtggcc
ttttacatctacgtgagtgctcgtggcccagctccctggcagtgcctcctcctccagagg
gacacagtggccacacagccacaggcagttaaagctctgggctgctgcacttgtactgct
ccccctggaacacacagacctgccccaaaccatcagctgctggcagagtacacaactgta
gctggtactgatgtttccatggatccaaggtcccttggatttacacttccatgtcattcc
catcagtgtctttga
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