Agelaius tricolor (tricolored blackbird): 139596262
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Entry
139596262 CDS
T10815
Symbol
TENT4B
Name
(RefSeq) LOW QUALITY PROTEIN: terminal nucleotidyltransferase 4B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139596262 (TENT4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139596262 (TENT4B)
03016 Transfer RNA biogenesis [BR:
atrc03016
]
139596262 (TENT4B)
Enzymes [BR:
atrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
139596262 (TENT4B)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
139596262 (TENT4B)
Transfer RNA biogenesis [BR:
atrc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
139596262 (TENT4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
Motif
Other DBs
NCBI-GeneID:
139596262
NCBI-ProteinID:
XP_071296472
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MDPRIAWFQPEQLGPSNRLWMQIWETTQGVRNLYFXSSSSSSRSSSSNSSSSSSRAPXAA
AGPASPPGMYRAPRADPPPDFLPLESANNPHSRGHRQASPPPGAAAWARPARGAPPAAAA
AASNKRKRDNKASTFGLNYSLLLGRAPAPADEPAARAQPGLAEPLYTGTPWKKRNYSQGV
VGLHEEIIDFYKYMSPRPEEERMRMEVVSRIENVIKELWPNADVQIFGSFKTGLYLPTSD
IDLVVFGKWETLPLWTLEEALRKHNVADENSVKVLDKATVPIIKLTDSFTEVKVDISFNV
QNGVKAAQLIKDFIKKYPVLPFLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLH
PREDACMPNANYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSMLDGYRPSM
LYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRV
TQEVATYRDWISKQWGMQSRTESSCNGNGVTLIVDTQQLDKCNNNLAEENEALGKPRNKT
SETLSKHSSNSSSGPLSSSSSTLSSSSDVDSDGTPCKTSKQLSCRQSTTNRVGSQEVSLE
SSQSSGKTQNSQTANTSSNTNKSQHGSARLFRSSNKGFQGPTNSSHGTSVTNKQHQGSKS
HHQFFHGKKRKHKRDAALSDLCR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggatccccggatagcctggttccagccagagcagctcggcccctcgaaccgcctgtgg
atgcagatctgggagaccacgcagggggtccgcaacctctacttcnncagcagcagcagc
agcagcaggagcagcagcagcaacagcagcagcagcagcagcagagcgcccnccgccgcg
gccggcccggcctccccgcccggcatgtaccgcgccccccgcgccgaccccccgcccgac
ttcctgccgctcgagagcgccaacaacccgcacagccgcggccaccgccaggcctcgccg
cccccgggggccgccgcctgggcccggcccgcgcggggggcgccgcccgccgccgccgcc
gccgccagcaacaagaggaagcgcgacaacaaggccagcaccttcgggctcaactacagc
ctgctgctgggccgcgcccccgccccggccgacgagccggccgcccgcgcccagcccggc
ctggccgagccgctctacaccggcaccccctggaagaagaggaactacagccagggagtc
gtgggtcttcatgaagaaatcattgacttttataagtatatgtctcccagacctgaagaa
gagagaatgcggatggaagtggtgtccagaatagaaaatgttatcaaagagctctggcct
aatgcagatgtgcagatatttggaagttttaaaactggtttatatttacctacaagtgat
attgatttagttgtgtttggaaaatgggagacattacctctttggaccctggaagaagct
cttagaaagcacaatgtagcagatgaaaattcagtaaaggttttagataaagcaactgta
cctattattaaactgacagattccttcactgaagtaaaagttgatataagctttaatgta
cagaatggggttaaagcagcccagctcatcaaagattttatcaagaaatatcctgtgtta
ccatttctagttttagtattgaaacagttcctgttgcagagggaccttaatgaagtattt
acaggtggaattggttcttatagtctctttttaatggcagtcagtttccttcagctgcat
cccagggaagatgcctgtatgcccaatgccaactatggtgttcttttaatagagtttttt
gaattatatggacgtcacttcaattatctgaagactggaatccgaataaaggatggtggc
tcttatgttgccaaggatgaagtgcagaaaagcatgttggatggctacagaccatcaatg
ctgtacattgaggatccattacagccaggtaatgatgttgggaggagttcctatggtgcc
atgcaagtgaagcaggcttttgattatgcctatgttgttctgagccatgctgtttcccca
atagctaaatattatcctaacaacgaaacagaaagtatattagggagaataattagagta
acacaagaagtggccacatacagagactggatatccaagcagtggggaatgcaaagcaga
acagaatcttcatgcaatggtaatggagtaaccttgatagtagatactcagcagctggac
aaatgcaacaataatcttgctgaagagaatgaagcactgggaaaacctagaaataaaact
tcagaaacacttagtaaacattcttcaaattcttcatcaggtcctttatcatcatcatca
tctacattgtccagctctagtgatgtagattctgatggaacaccttgcaaaacctctaaa
cagttgagttgtcgtcagtctaccacaaacagagtggggtcacaagaagtgtcactggaa
tcctcccagtcaagtgggaaaacacaaaatagccaaacagccaatacatccagcaacacg
aacaaatctcagcacggatctgcacggttatttcgctcctctaacaaaggcttccaaggt
ccaacaaactcaagccatggtacctcagtcacaaacaaacagcaccaaggcagcaaatca
caccatcagtttttccacggcaaaaagaggaaacacaagagggatgcagccctgtcagac
ctttgtagatag
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