Agelaius tricolor (tricolored blackbird): 139596414
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Entry
139596414 CDS
T10815
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
139596414 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
atrc04040
]
139596414 (CNGB1)
Ion channels [BR:
atrc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
139596414 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
139596414
NCBI-ProteinID:
XP_071296808
LinkDB
All DBs
Position
Unknown
AA seq
1383 aa
AA seq
DB search
MMGWIDRVVPQPPVPHVAEETPVQPAKAPTEKAAGPTDAAERARTEEIEKKVTFVASEES
SSVFDSVGSSVLSWLSHGLEKVIPQPAPAPGLQALGKSFETSIDIADETEVQVIGDEDDD
GLEITPFDAEEDVSEGEPESTPEQWAGQRVLSWLSQGFERILPQPEGMKKPETEPKEKSE
GTVEGTEGTKTQEKSKPSAPGAPSTTAAAKAAAAQGQPEPGAALSPQPGAGDGTRMFSWF
IQGLEKVMPQPVTREKQDTQGVATATSSPVEQIHAAPGQQEETHLILEEMEDGQMNEEMT
AWAQEAELQADPHSLPTIQEEPQEEEPRICLCSPNTVKGDEEKEEEEKKEEEEEEERKKE
EEERKKEEEERKKEEMKQEEEERKEEMKQEKDRKEEEDRRKEEKERKQQEEDRKEEEEER
RKEEEDRKNEEEEMKQEEEEKMKQEEEDRKKEEEERKKEKEENRENGEEERKIEEEDRKK
EEEERRKEEEERKIEEDRKEEERKEEVKKKEEKRKKEEVKKKEEKRKKEKERKKEKEKKK
EEKKKEEEEEEEDKKEEEQQESAEPLLQPPCPPADEDVDEACLAQEALRAEQLEEVEISN
LQGALVQVEEETAEAAETDAEGHPPTVEIKDVDSPERAVEIHGTYGELPAAGAPNLLAVP
GAASPRRKQLLPEDALDKGLVSQSPSQGLGWDQEQRESLPERIGSASSLSSAIINTRLQE
LVRLFKERTEKVKEKLIDSDVTSDDESPVASPTKPAPAAAAVPAPGGELEGDKPLGDDHY
CEMLCCTFKRRPWLEHLKSYQFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPY
QTPANIHYWLLVDYLCDLIYLLDILIFQTRLQFVKGGDIITDKKAMKENYLRSQRFKMDV
LCLLPLDLLYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILTKAYIYRVIRTTAYLLYSL
HVNSCLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQL
LNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYRIPRAVQNRVKTWYE
YTWHSQGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVV
YLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAAGGGNRR
TANVVAHGFANLFILEKKDLNEILVHYPESQKLLRKKAKKMLRSNNKPKDEKGGPGDALV
IPPKAETPKLFRAALAATGRMGGKGPLGRLRWRLRELQELQAMQEAQAMQEAQGSSVSPT
PPKSPVHQRSPVTSRRAQTRPGEEISSESSDHSVTIRVISTAKEDEEILAAEISEKDEKK
EEQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctggattgaccgggtggtgccccagccccccgtgccccacgtggcagaggag
acccctgtgcagccagccaaggcaccgacagaaaaagctgctggccccacagatgctgct
gagcgggcacgcacggaggaaatagaaaagaaagtgacctttgtggcttctgaggaatca
agttctgtgtttgacagtgtggggagcagtgtgctctcctggctctcccatgggctggag
aaggtgattccccagccagccccagccccagggctgcaggcactcgggaagagcttcgag
acaagtattgacattgctgatgagacagaggtccaggtcattggagatgaggatgacgat
ggtctggagataactcccttcgatgccgaggaggacgtgtccgagggggagccggagagc
accccggagcagtgggcaggacaacgagtgctcagctggctctcacagggcttcgagagg
attttgccgcagccagaggggatgaaaaagccggagacagagccgaaggagaagagcgaa
ggcacagtggaaggcacagaagggactaaaacccaggagaagtctaaacccagcgctcca
ggcgctccaagcaccacagcggcagcgaaggcagcggcagcccagggccagccggagcca
ggggctgccctgagcccccagcccggggctggggatggcaccaggatgttcagctggttt
atccaggggctggagaaggtgatgccgcagccggtgaccagggagaagcaggacacacag
ggagtggccacagcaacctcgagtcctgtggaacaaattcatgcagcccctgggcagcag
gaggaaacccatctcatcctggaagagatggaggatggccagatgaatgaagagatgaca
gcctgggctcaggaggctgagctgcaggcagatcctcattcccttcccaccatacaggag
gagcctcaggaagaagaacccagaatctgtttgtgctccccaaacactgtcaagggggat
gaagaaaaggaggaggaggagaagaaagaggaggaggaggaggaagagaggaagaaagag
gaagaggaaaggaagaaagaagaagaggagaggaaaaaagaggagatgaagcaagaggaa
gaggagaggaaagaagagatgaagcaagagaaagacaggaaagaggaagaggacaggaga
aaggaggaaaaggagaggaagcaacaggaggaggacaggaaagaggaggaagaagagagg
aggaaagaggaagaggacaggaaaaatgaggaagaggagatgaagcaagaggaggaggag
aagatgaagcaagaggaggaagaccggaaaaaagaggaagaggagaggaaaaaagagaag
gaggagaacagggaaaatggggaagaggagaggaagatagaggaggaggacaggaagaaa
gaggaagaggagaggaggaaagaggaagaggaaaggaagatagaggaggacagaaaggaa
gaggagaggaaggaggaggtgaagaagaaagaagagaagaggaagaaggaggaggtgaag
aagaaagaggagaagaggaagaaagagaaggagaggaaaaaagagaaggagaagaagaaa
gaggaaaagaagaaagaagaagaagaagaagaagaagataagaaagaggaggagcagcag
gagagtgcagaacccctgctgcagcctccttgtccccctgctgatgaggatgtggatgaa
gcctgccttgcccaggaggccctcagggctgagcagctggaggaagttgagataagtaat
ctgcaaggtgccctcgtgcaggtggaagaggagacagctgaagctgctgaaactgatgct
gaaggtcatccccccaccgtggagatcaaggatgtggacagcccagagcgtgctgtggag
atccacggcacctatggagagctgcctgctgccggcgctcccaacctgctggccgtgccc
ggcgctgcatcccccaggaggaagcaactgctcccagaggatgctctggacaaggggctg
gtgagccaatcccccagccaagggctgggctgggaccaggagcagagggaaagcctccct
gagcgcatcggctcggcctcgagcctgagcagtgccatcatcaacacccggctccaggag
ctggtgaggctcttcaaagagaggactgagaaggtgaaggagaagctgattgactctgat
gtcacctcagatgatgagagccccgtggcatctcccaccaagccagcacctgcagcagca
gcagtgcctgccccaggaggggagctggaaggggacaaacctttgggggatgaccactac
tgcgagatgctgtgctgcacgttcaagcgccggccctggctggagcacctgaaaagttac
cagttccccagcagcattgaccccctgaccaatctgatgtacgtgctgtggctgttcttc
gtggtcatggcctggaactggaactgctggctgatccctgtccgttgggccttcccctac
cagaccccagccaacatccactactggctgctggtggattacctctgtgacctcatttac
ctgctggacatcctcatcttccagacccggctgcagttcgtgaaggggggagacatcatt
actgacaaaaaggccatgaaagagaactacctgcgatcacagcgcttcaagatggatgtg
ctgtgcctgctgcccctggatttactctacttcaaagtgggtgtgaaccccctgctgcgc
ttcccccgctgtctgaagtacatggccttcttcgagttcaacaaccgcctggaggccatc
ctgaccaaggcatacatctacagagtgattcgcaccactgcctacttgctgtacagcctg
catgtgaactcctgcctctactactgggcatcagcctatgaaggactgggctccaccacc
tgggtctatgatggggaaggaaacagctacatccgctgttactactgggcagtgaaaacc
ctcatcaccattgggggcctgccagaccccaagaccctgtttgagatcgtcttccagctg
ctgaattacttcacaggggtctttgctttctctgtcatgatagggcagatgagagatgtg
gttggtgccgctactgcaggacaaacgtactatcggagctgcatggacagcaccattaaa
tacatgaacttctacaggatccccagggcagtgcagaacagggtgaagacgtggtacgag
tacacatggcactcccaaggcatgctagatgagtcagagctgctggtgcagctgccagac
aagatgaggctggacatcgccatcgacgtgaactacaacatcgtgagcaaagtggccctt
ttccagggctgtgacagacagatgatctttgacatgctgaagcggctcagatcggtggtg
tacctgcccaacgactacgtgtgcaagaagggagagatcggccgggagatgtacatcatc
caggcgggacaggtgcaggtgctggggggacccgacggcaaatccgtgctggtgactctg
aaagctggatctgtctttggggaaatcagcctgctggcagcaggagggggaaatcgccgc
acagcaaacgtcgtggcccacggcttcgccaacctttttattttggagaagaaagacttg
aacgagattttggtgcattacccggagtctcagaagctgctgcgcaagaaagccaagaaa
atgctgagaagcaacaacaaacccaaagatgagaagggaggccccggagatgccctggtc
atccccccgaaagctgagaccccaaagctgttcagggctgccctggcggccacggggagg
atggggggcaaggggcccctggggcggctccgctggaggctgcgggagctgcaggagctg
caggcgatgcaggaggcgcaggcgatgcaggaggcgcagggttccagtgtcagcccaacc
ccaccgaagtcaccagtgcaccagagatctcctgtcacatcccgcagagcacaaacccgc
ccgggagaggaaatatcctcagaatcttctgatcattcagtcaccattcgtgtgatttcc
acagcaaaagaggatgaggaaatccttgctgctgagatttcagagaaagatgaaaagaaa
gaagagcaatga
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