Agelaius tricolor (tricolored blackbird): 139596716
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Entry
139596716 CDS
T10815
Symbol
DIS3L
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139596716 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139596716 (DIS3L)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
139596716 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
139596716
NCBI-ProteinID:
XP_071297270
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MLRTEKVLQLRGQQGRAVRVVREHYLRPDVPCRSALCRSAQCRAACARDGKLLSDDVTHY
VVPDCKVVQEYLEILEFPELKGIIFMQTACQAVQHQKGRRQYNKLRNLLKDPRHDCTVFA
NEFHQHCYLPREKGESMEKWQTRNIYNAAAWYHNHCLGQMPVVMVTEDEDAIRQYGNETE
GVFVISFKNYLDNFWPDLKAAHELFDSIVQARRERESESQENHGKEYPEHLPVEVLEAGI
KSGRYLQGALNVNKHRAQLEAFVRLQGAGSKDTELQSDILIYGTKARNRAIHGDVVVVEL
LPVHEWKGRTVALCENETEDKAPADTTGDPMPTGKVVGIIQKNWRDYVVTFPSKEESQSQ
GRNAQKVLVTPWDYRIPKIRISTQQAETLQEYRVVVRIDSWESTSLYPNGHFVRVLGRIG
DLEGEIAAILVENSICAAPFSEIQMSEMPVSSPKNPWKVSPEEVKKRLDLRDTHLIFSID
PKGCEDVDDALSVRTLPNENLELGVHIADVTHFVAANSYTDVEARARATTYYLADRRYDM
LPSVLSADLCSLLSGVDRYAVSVLWELEKESFETLRVQYTRTLIRSAYKLEYETAQGLLD
GDTSVVGDILELKGLDEGARQKKLAELVWAISKLTDIARHVRAKRDRCGALELEGIEIRV
QLDDKRNIHDLIPKQPLEVHETVAECMILANHWVAKRISEDFPHQALLRQHPPPRQEFFT
ELRECASAKGFSIDTRSNKALAESLDRANDPSDPIVNKLLRSMATHAMSNALYFSTGSCP
EEQFHHYGLALEKYTHFTSPIRRYADIVVHRLLMAATLRGTTGDVKDNIISNKDLEELCR
HINNRNRAAQRAQKQSTELFQCMYFRDRSAESDERCVADGVIYSIRTNGVLVFVPRYGIK
GAAYMKNKEGLVISCQGAGSCQWKPGSLHRSQHKITSTTAAGDSMTLSLFDHITVRILVQ
SSRCHAETIKLEIIRNAPHHTADTEAAHKGLHVVKSDLVKEVSQSAEEAQRAQDGARLEV
MDEESLEFCQTKGPSLYQLLEEIRELALLDVTEDIRT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcacggagaaggtgctgcagctgcgggggcagcagggccgcgccgtgcgggtg
gtgcgggagcactacctgcgccccgacgtgccgtgccgcagcgccctgtgccgcagcgcc
cagtgccgcgccgcctgcgcccgcgatggaaaattgctgtcagatgatgtcacacactat
gttgtccctgactgcaaggttgttcaggagtacctggagattctggagtttccagagctg
aaaggaattattttcatgcaaacagcttgtcaggctgtgcaacatcagaagggacgcagg
cagtacaacaagttacggaatctgttgaaggatccccgtcacgactgtactgtgtttgct
aatgaattccaccagcactgctacctgcccagggagaagggagaatccatggagaagtgg
cagaccaggaatatttacaatgcagcagcctggtatcacaatcactgcctgggtcagatg
ccagttgttatggtaacagaagatgaagatgctatcaggcagtacggaaatgaaacagaa
ggagtgtttgtgatttccttcaagaattacttggataacttctggcctgacctgaaggct
gcccatgagctctttgactccatagtccaagctcggcgtgagcgggagagtgaaagccaa
gagaaccatggaaaagaatatcctgagcacttacctgtggaagtactggaggctggcatc
aagtctggaagatacctgcagggtgcactgaatgtcaacaagcaccgagcacagctggaa
gcttttgttcggcttcagggggctggcagcaaggacacagaacttcaaagtgacatcctt
atttatgggaccaaggctcggaatcgtgcaatccacggggatgtggttgtggttgagttg
ctgcctgtgcatgaatggaagggaaggactgttgccctctgtgaaaatgagactgaggac
aaagcacctgcagacaccacgggtgaccctatgcccacaggtaaagtagttggaatcatc
cagaagaactggagggattatgtggtcactttcccctctaaagaagagagccagtcccag
ggcagaaatgctcagaaagtccttgtaacaccttgggattaccgaattcccaaaatccgg
atcagcactcagcaggctgagacattacaggagtacagagttgtggtgcgcatcgattcc
tgggagtcgacttccctgtacccgaacgggcactttgtgagagtgctgggcaggattggg
gacctcgagggggagattgcagctattctggtggagaacagcatttgtgctgcccctttc
tcagaaatccagatgagtgaaatgccagtgagttctccaaagaatccatggaaagtgagt
ccagaggaggtgaaaaaacgccttgacctgagagatacccacctgatattcagcattgac
cccaagggctgcgaggatgtggatgatgctctctctgtcaggactctgcccaacgagaac
ctcgagctgggggtgcacattgcagatgtgactcacttcgtggcagcaaattcctacact
gatgttgaggccagagcaagggctaccacgtattacctggcagaccggcgctatgacatg
ctgccctccgtgctcagcgctgacctgtgctccctgctcagcggcgtggacagatacgcc
gtgagcgtcttgtgggagctggagaaggaatcgttcgagacgctgagggttcagtacacc
agaaccctgatccgctctgcctacaagctggagtatgagacagcccagggactgttggat
ggggacaccagtgtcgtgggggacatcctggagctgaaaggcctggatgaaggagcgagg
cagaagaagctggctgagctggtttgggccatatccaagctcaccgacatagcgcgacac
gtccgggccaagcgggaccgctgcggcgcgctggagctggaggggatcgagatccgagtg
cagctggatgacaaacggaacatccatgacctcatccccaagcagccgctggaagtgcac
gagaccgtggcggaatgcatgatcctggccaaccactgggtggcgaaaaggatttccgag
gatttcccccaccaagctctgctgcggcagcaccctccaccacgccaggaattcttcact
gagcttcgggagtgtgccagtgccaaaggcttctcaatagacacacggtctaacaaggct
ttggccgagtctctggacagagcaaacgacccctcggaccccattgtgaacaaactgctg
cgctccatggccacccacgccatgtccaacgccctctacttctcaactggctcttgtccc
gaggagcagtttcatcactatggactggccctggagaagtacactcacttcacctctccc
atcaggagatacgctgacatcgttgtgcacaggctgctgatggcagcgaccctgagggga
accacgggggatgtgaaggataacatcatcagcaacaaggacctggaggaattgtgcaga
cacatcaataacaggaaccgggcagcccagcgtgctcagaagcagtccacagagctcttc
cagtgcatgtacttccgagacaggagcgccgagagcgacgagcgctgcgtggccgacggg
gtcatctactccatccgcaccaacggcgtgctggtcttcgtgccacggtatggaatcaaa
ggtgcagcctacatgaaaaacaaagagggcttggttatctcctgccaaggggctgggagc
tgccagtggaagcctggatccctccatcgctctcagcataaaatcacctccactacagct
gctggagactcgatgaccttgagccttttcgatcacatcacagtgaggatccttgtgcag
agttcccgctgccacgctgaaaccatcaagctggagatcatcaggaacgcaccacaccac
actgcggacaccgaggctgcccacaagggcctccacgtggtgaagtctgacctggtgaag
gaagtcagccagtctgcagaggaagcccagcgtgcccaggatggagccaggctggaagtg
atggatgaggagtccctggagttctgccagaccaaggggcccagcctgtaccagctgctg
gaggagatccgggagctggcactgctggatgtgacagaggacatcaggacttga
DBGET
integrated database retrieval system
