Agelaius tricolor (tricolored blackbird): 139603339
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Entry
139603339 CDS
T10815
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1 isoform X1
KO
K03172
TNF receptor-associated factor 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139603339 (TRAF1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-C3HC4
zf-TRAF
TRAF3_RING
TRAF2_zf
zf-RING_UBOX
DpdA
Motif
Other DBs
NCBI-GeneID:
139603339
NCBI-ProteinID:
XP_071310191
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All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MAHPARLRLQDPAATFSISAARGNSRPAGPLPWQFPCPRPGRRRCPEQGKLRSRRPRGAA
RAPRSSRPERGSIADSRPSPRPRPRYRSESPVPAVRAPVSAVRAPVPAVRDPVFPLRGPG
TRGESPVPAVSGPVPAVSACQGPAGSELAEMAESSPRSLQDPPSSAPDENEFPFGYPTSI
CEDVPGQKFLCSNCHNILKKALQTLCGHRYCSACLTWIVRNNKNAICQKCKEEDPNTLGE
ESLLAEDRAFGDAAINKEISELRVHCVTPGCSWSGIMKDFEEHQSLCEYALIPCHTGCGH
VVMRRKLADHLENGCVNNVTVCQQCQCSLASSECQEHSCEGSLCKEQKPVQTETASKEKS
HSTSSASKDGCCFSEVGCAFRGSKEKIQEHEKSAVGAHMLLLLQHMRHLQGSLCPKGFSP
RPELSLKSAGKSTCELQMPAEPELDCFPASSVPGDESVLQQLVREKVISELENKLHVFEN
IVAVLNKEVESSNLEILAFRRQSELDQNIIRGLELKIAELHQCLMQKDAGLSSLHKSLLF
SEQASYDGIFLWKITEVGRKLQDSVTGRTVSLYSPAFYTAKYGYKVCLRVYLNGDGTGKG
THMSLFFVVMKGDYDALLPWPFRHKVTFMLLDQNNREHVIDAFRPDLASASFQRPVNEMN
VASGCPLFLPLAKLQSPKHAYVREDTLFLKCIIETN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcacacccggcacggctgcgcttgcaggacccggccgccacattctccatttcggcg
gcccgggggaattcgcgcccggcggggcctttgccctggcagttcccgtgcccgcggccg
ggacggcgccgctgccccgagcaggggaagctccgctcccgccggccccggggcgcggct
cgggctccccgctcctcccggccggagcgaggcagcatcgccgacagccggcccagcccc
cggccgcggccccggtaccgcagtgagagcccggtacccgcggtgagagccccggtatct
gcggtgagagccccggtacccgcagtgagagacccggtattcccgctgagaggacccggt
acccgcggtgagagccccgtacccgcggtgagcggcccggtacccgcggtgagcgcctgc
cagggcccggcgggctcagagctcgctgagatggctgagagcagccccaggagcctgcag
gacccccccagctctgcccccgatgagaacgagttcccctttggataccccaccagcatc
tgtgaggacgtgcctgggcagaagttcctgtgcagcaactgccacaacatcctgaagaaa
gccctgcagacactgtgtgggcacaggtactgctctgcctgcctcacctggatcgtcaga
aacaataaaaatgcaatttgccagaaatgtaaagaggaagatcccaacactttaggtgag
gaaagcctattggcagaagacagggcttttggtgatgctgccattaataaagagatttct
gagctcagagtccactgtgtgacccctggatgcagctggtctggtatcatgaaagatttt
gaagagcatcagagtttatgtgaatatgctttgatcccctgtcacactggctgtgggcac
gtggtgatgaggaggaagctggcagatcacttggaaaatggatgtgtcaataatgtgaca
gtgtgtcagcagtgccagtgcagcctggctagctctgagtgccaggagcattcatgtgaa
ggcagtttatgcaaggaacaaaaacctgtgcaaacagaaacagcatcaaaggaaaagagc
cactctacatcctcagccagcaaggatggctgttgtttttctgaagttggctgtgcattt
aggggaagcaaagagaagatccaggagcacgaaaaatccgcggtgggagcccacatgctg
ctcctgctgcagcacatgaggcacctgcagggatccctgtgccccaagggcttctcccca
cggccagagctgagcttgaaaagtgcagggaaaagcacctgtgagctgcagatgccagca
gagccagagctggactgtttccctgcttcctctgtccctggggatgagtctgtcctgcag
cagctcgtgagggagaaggtgatttctgagctggaaaataagctgcacgtgtttgagaac
attgtggcagtgctcaacaaggaggtggagagctctaatttggaaatcctggccttcagg
agacagagtgagctggaccagaacatcatacggggccttgagctgaagattgcagagctg
caccagtgcctgatgcagaaggatgcaggcctgagcagcctgcacaagagcctgctgttc
tctgagcaagcctcctacgatggcatcttcctctggaaaatcactgaggtgggcaggaag
ctccaggactctgtgactggcaggacagtcagtttgtactccccagctttctacactgca
aagtatggctacaaggtgtgtctgagggtgtacctgaacggggatggcacagggaaagga
acccacatgtccctgttcttcgttgtcatgaaaggagattacgacgctttgctcccgtgg
cccttcaggcacaaggtgacgtttatgctgcttgaccaaaacaacagggagcacgtaatc
gatgcctttcgcccagacctggcttctgcttccttccagaggccagtgaatgagatgaac
gtggccagtggctgccccctgttcctgcccctggccaagctgcagtcccccaaacacgcc
tacgtgagggaggacacgcttttcctcaagtgcatcatagagacaaattag
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