KEGG   Agelaius tricolor (tricolored blackbird): 139604651
Entry
139604651         CDS       T10815                                 
Symbol
PCGF1
Name
(RefSeq) polycomb group RING finger protein 1 isoform X1
  KO
K11487  polycomb group RING finger protein 1
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    139604651 (PCGF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:atrc03036]
    139604651 (PCGF1)
Chromosome and associated proteins [BR:atrc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     139604651 (PCGF1)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-rbx1 zf-RING_5 zf-RING_UBOX Rad60-SLD zf-ANAPC11 zf-Nse TRAF3_RING EHMT1-2_CRR zf-RING_6 Zn_Ribbon_1 zf-C3HC4_4 zf-RING_10 Prok-RING_4 C2_SHIP1-2_2nd
Other DBs
NCBI-GeneID: 139604651
NCBI-ProteinID: XP_071311930
LinkDB
Position
Unknown
AA seq 261 aa
MASPPQGGPMAIAMRLRNQLQAVYKMDPLRNEEEVKVKMKELNEHIVCFLCAGYFIDATT
ITECLHTFCKSCIVKYLQTSKYCPMCNTKIHETQPLLNLKLDRVMQDIVYKLVPGLQHSE
EKRIREFYQSRGLDRVTQPSGDDTVGGDPMGLPYSTFDHSRAHYFRYDEHVSLCLEKLSS
SKDKSKAMLQQKYVRCSVRAQIRHLRRVLCHRLGLSLQHVQILFDNEPLPDHMTMKQLWL
SRWFGKPAPLLLHYSIKDKRR
NT seq 786 nt   +upstreamnt  +downstreamnt
atggcgtcgcctcctcaggggggcccgatggccatcgccatgcggctgcggaaccagctc
caggccgtctacaagatggacccgctgcggaacgaggaggaagtgaaggtgaagatgaag
gagctgaatgagcacatcgtgtgtttcctgtgcgccgggtacttcattgacgccaccacc
atcaccgagtgcctgcacaccttctgcaagagctgcatcgtgaagtacctgcagaccagc
aagtactgccccatgtgcaacaccaagatccacgagacgcagccgctgctcaacctcaaa
ctggacagggtcatgcaggacattgtctacaagctggtgcccggcctgcagcacagtgag
gagaagcggatccgggagttctaccagtcccgaggccttgaccgggtgacgcagcccagc
ggtgacgacacggtggggggtgaccccatggggctcccctacagcacctttgaccactcg
cgcgctcactatttccgctacgacgagcacgtctcgctctgcctggagaaactgagctcc
agcaaggacaagagcaaggccatgctgcagcagaaatacgtgaggtgctcagtgagggca
cagatccgacacctgcggagggtcctgtgccatcggctggggctgtccctgcagcacgtg
cagatcctgtttgacaatgagcccctccccgaccacatgacaatgaagcagctctggctc
tcacggtggtttggcaagcctgcgcccctcctgctgcactacagcatcaaggacaagagg
aggtag

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