Amaranthus tricolor (tampala): 130800364
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Entry
130800364 CDS
T09367
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130800364
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130800364
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130800364
NCBI-ProteinID:
XP_057519831
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Position
14:3338877..3344024
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AA seq
439 aa
AA seq
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MRDIMLRFVLLFIFVVCMMNLQHVEANIGDYDDHWIKKEDAAKWNAAKAYNPNPHGVVNK
LNLEVRKALEETNHKRRRLGKYSGPCLAANPIDRCWRCDDDWSKNRQKLADCVLGFGHKT
SGGKGGPIYVVTDNSDNDMLNPKPGTLRHAVIQDGPLWIIFKHGMSIRLSEELLVSSNKT
IDGRGGHVHIAGGAGLMLQFVDNVIIHNVHIHDIKVGKGGLIRDSVNHYGFRTASDGDGI
SIFGSTNIWVDHVSMSNCMDGLVDAIEASTAITVSNCHFTDHNDVMLFGARDSSTQDEIM
QVTIAFNHFGKRLIQRMPRCRFGFFHVINNDYTHWEMYAIGGSQHPTIISHGNRFIAPPN
IFAKEVTKREYAPYSVWKDWLWTSDEDLMLNGAFFNQSGDKHKELGYTRQDVITSKPGTY
ATRLTRFSGALKCSEGSGC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagagacataatgctaagatttgtgttattgttcatatttgtggtatgtatgatgaac
cttcaacatgttgaggctaacattggtgattatgatgatcattggataaaaaaagaggat
gctgcgaagtggaatgcagctaaggcatacaatcctaatcctcatggagttgttaacaag
cttaatcttgaagttcgaaaggccttggaggaaaccaaccataaaagaagacgcttagga
aaatatagtggcccttgcttagcagcaaaccccatagacagatgttggagatgcgacgac
gattggtcaaaaaatcgtcaaaagctagccgattgcgtgctagggttcggccataagacg
tcgggaggaaaaggcggaccaatctacgtagtaaccgataactcagataacgatatgtta
aaccctaaacctggaactctacgtcatgcagtaatccaagatgggccactttggatcatt
tttaagcatggaatgagcattagacttagtgaagaactcttagtatcaagcaataagacg
atcgatgggcgaggcggacacgtacatattgccgggggagccggattaatgttacaattt
gtggataatgtgattatacataatgtacatatacatgatattaaggtgggaaaaggagga
ttaattcgagattcagttaatcattacgggtttagaacggctagtgatggtgatgggatt
tctatatttggatctactaatatttgggttgatcatgtttctatgtctaattgtatggat
ggtttggttgatgcaattgaagcttctactgctattactgtctctaattgtcacttcact
gatcataatgatgtaatgttgtttggagcaagagattcttcgacacaagacgaaataatg
caagtaacaatagcctttaaccactttgggaaacgtttaatccaaaggatgccaagatgt
agatttggattcttccatgttattaacaatgactatactcattgggaaatgtatgccatt
ggaggcagccaacatcctactatcatttctcatggcaatcgttttattgcaccacctaat
atttttgctaaagaggtaacgaagagggaatatgcaccatatagtgtatggaaagattgg
ctatggacatcagatgaagatctaatgttgaatggagctttctttaatcaatctggtgat
aaacacaaggaactcggctatacacgccaagatgtaatcacttctaagcctggaacttat
gctacacgtctcactcgtttttctggtgcccttaagtgttctgaaggatcaggatgctaa
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