Amaranthus tricolor (tampala): 130802684
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Entry
130802684 CDS
T09367
Name
(RefSeq) pumilio homolog 1-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
atri
Amaranthus tricolor (tampala)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
DUF4258
Motif
Other DBs
NCBI-GeneID:
130802684
NCBI-ProteinID:
XP_057522681
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All DBs
Position
16:3190064..3198051
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AA seq
1020 aa
AA seq
DB search
MYRSMASEGERSFNNGEKDLDMLLKERELGFDIFRSPSAPPTIEGNSIGVSFSEDNGGVG
GVSREVSENEYRSDPAYINYYYSNVNLNPRLPPPLLSKEDWRFSQRWSGGPEPGLGGIGD
RRKVSGGSNNRDEHEEFNGSNVRGNIVESNNNNNNNNNGGTGSSLFSIGFNGVQEEGNNG
QNEWNGVGLPGLGMGRRQKSFAEIIQNDLNSSSSTARIPSRPASRNAFDETISSEAQMAP
LFSTEASRGRNLQGLSVNHNADDSASLSYASVLGASLSRSTTPDPQLIAKAPSPRIPTAG
EVRVNSMDKRSVHSPNSLHATMNGPGAADLVAALSGMSLSSDPQMDEERQMRPQFQHGVS
GHRNLFNLHGNHNHVKQTQHLNSADFAPFLQQSVSHSTKGSYPIKGKGGSVGMDPNYYLR
SDGFDQHKHGAPNSPSNFHIVGSPSSAIPNYSLSGHNINPALASMMAGQLGSGAMPPLFE
NAAASAIGVGGLDSRRLGGSVSSRANLMAAAAELQNLGRGGSQSQLDPLYLPYLTSNDYS
AAQLAALNDPFLNGSNSYINFLALQKAYTGTLLPPQKSDRLYLGKSAGLNHGYYGNPGFG
IGTGFGGNHFASSLLPNSPISPGSPLRQGERNMGLPSGMRNLAAGLMGNWRSEADGFMEN
SFGSSLLNEFKSNKTRSFELSEIAGHVDEFSMDQFGSRFIQQKLETASTEEKNMVFHEII
PQALSLMTDVFGNYVIQKFFEHGTASEIRELADKLSGHVLTLSLQMYGCRVIQKAIEVVA
LDQQKKMVVELDGHVMRCVRDQNGNHVIQKCIECIPEDSIQFIISTFYDQVLTLSTHPYG
CRVIQRVLEHCHDPITQRIVMDEIMQCVCMLAQDQYGNYVVQHVLEHGKPHERSAIITKL
TGKIVQMSQQKFASNVIEKCLAFGDETERRNMVNEILGATDDNEPLQVMMKDQFANYVVQ
KMLETCDDQQLEVILSRIKNHLNALKKYTYGKHIVARVEKLVATGERRISLQTPYPAPTA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtataggagcatggcatcagaaggagaacgatcgttcaataatggagaaaaagattta
gatatgttgttaaaagagagagaattgggtttcgacattttccgaagtccatcagcgccg
ccaacaatcgaaggtaacagtatcggagtttcattttccgaagataatggtggcgtcggt
ggagtttcacgtgaagtgtcggaaaatgagtataggtctgatccagcttacattaactac
tactattcgaatgttaatttaaatcctaggttaccaccgccattgctgtctaaggaagat
tggaggttctctcaaaggtggagtggtgggcctgaacctgggctgggagggattggtgat
cggaggaaagtgtctgggggtagtaataacagggatgaacatgaagagtttaatgggagt
aatgttcgtggtaacattgttgaaagtaataataataataataataataataatggtgga
actggaagttctttgttttcaattgggtttaatggcgtacaagaggaaggaaataatgga
caaaatgagtggaatggtgttggattgcctgggttaggaatggggagaaggcagaagagt
tttgctgaaattattcagaatgacttgaatagttctagctctactgcgaggattccttct
cgtccagctagccgcaatgcatttgatgagaccataagttcagaggctcagatggctccc
ctcttctcaaccgaagcttcacgtggtagaaatctgcaaggcctttcagtaaatcacaat
gctgatgattctgcgtctcttagttatgcttctgttttgggtgcgtctttgtcaaggagc
actacccccgatcctcagctcatagctaaagctcctagccctcgcatcccaacagctggt
gaagttagggttaactctatggacaaaagaagtgttcacagtcccaattctcttcatgcc
accatgaacggccctggtgctgctgatcttgtagctgctttgtcaggcatgagtctatct
tccgatccacagatggatgaagaaaggcaaatgaggcctcagtttcagcatggtgtcagt
ggacaccggaaccttttcaatttacatggcaaccataaccatgtcaaacagacccaacac
ttgaattctgctgactttgctccatttctgcagcagtctgtatcacattctactaaaggg
tcatatcccatcaaaggaaaaggcggtagtgttggaatggatccaaattactacttgagg
tccgatggctttgaccaacacaagcatggtgcacctaattcaccctctaactttcacatt
gttggaagccctagctcagctattccaaactacagcctgagtggacacaatatcaatcct
gctttggcttcaatgatggcaggtcagcttggcagtggggcaatgccaccattatttgaa
aatgctgctgcttctgctattggtgtgggtggcttggattctaggagactgggagggagt
gtatcttcgcgagcaaacttgatggctgctgcagcagagcttcaaaatctcggtaggggg
ggaagtcagtctcagctggaccccttatatctgccgtacttaacatcaaatgactattct
gctgcccaattggcagctctgaatgaccctttccttaatgggagcaactcttacattaat
tttttagcacttcagaaagcttatacgggaacgttgctgccaccacaaaaatcagatcga
ctgtaccttggtaaatccgctggactgaatcatggttattatggaaaccctggttttggg
attggcacagggtttggtggaaatcatttcgcaagctcactccttcctaactctcctatt
agccctgggagtcctttgagacaaggggaaaggaatatggggttgccttctgggatgaga
aatttggcagctggtctaatgggaaactggcgatcagaagccgatggctttatggagaat
agttttggatcttctctgcttaatgaatttaagagtaacaagactagaagttttgagctt
tcagaaattgctggtcatgttgatgaatttagtatggatcagtttgggagtcgcttcatc
cagcagaaacttgaaacagcttcaacagaagagaagaacatggttttccatgaaattatt
ccccaagcattgtcactgatgacagatgtcttcggcaactatgtgattcaaaagtttttt
gagcatggaactgcttccgaaattagggagctggctgataaactctctggtcatgttcta
acactgagccttcaaatgtatggctgtagagtaattcagaaggccattgaagttgttgct
ttagatcagcagaaaaagatggttgtggaactagatggtcatgtgatgcgctgtgtacgt
gaccaaaatgggaatcatgtcatccagaaatgcatcgagtgcatacctgaagattctatc
cagttcattatatcaactttttatgaccaagttttgacattgtcaacccatccatatggg
tgtcgtgttatccagagagttttggaacactgccatgatccaataacccagcgcattgtg
atggatgagattatgcaatgtgtctgcatgttggctcaggaccaatatggaaattatgtt
gtccagcatgtactggagcatggaaagccacatgaacgctctgctatcataaccaagttg
actggcaagattgttcaaatgagtcaacaaaagtttgcttcaaatgtgatagaaaaatgt
ctcgcatttggggatgaaactgagcgtcgtaatatggtgaatgaaattcttggagctacc
gatgataatgagccgcttcaggtaatgatgaaagaccagtttgcaaactatgttgtacaa
aaaatgctggagacttgtgatgaccagcaacttgaagtgattctctcgcgaataaagaat
catctgaatgcattgaagaagtatacatatggaaagcatattgttgctcgtgtcgaaaaa
cttgttgcaactggagagagaagaatcagtttgcagactccctatcctgctccaacggca
tag
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