Amaranthus tricolor (tampala): 130806525
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Entry
130806525 CDS
T09367
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130806525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atri03021
]
130806525
03400 DNA repair and recombination proteins [BR:
atri03400
]
130806525
Enzymes [BR:
atri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130806525
Transcription machinery [BR:
atri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
130806525
DNA repair and recombination proteins [BR:
atri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
130806525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
130806525
NCBI-ProteinID:
XP_057527637
LinkDB
All DBs
Position
1:17055047..17056057
Genome browser
AA seq
336 aa
AA seq
DB search
MVREKIRVSTRTLQWKCVESRTDSKCLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKFDKIPHEYSNIVGIQESVHEILLNLKEIVLRSNLYGTCEASICVRGPRCVTAQD
IILPPYVEIVDNTQHIASLTEPIDLCIGLQLERNRGYQIKAQNNFQDGSYPIDALFMPIR
NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLYLE
DNQHKISLPLFTFHNRLAEIRKNKKKIALKYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
NSQEDLIKMADFHIEDIKQIFGTLEKHFVIDLKKKK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaaataagagtatctactcggacactgcagtggaaatgtgttgaatca
agaacagatagtaaatgtctttattatggacgctttattctctctccacttatgaaaggc
caagctgatacaataggcatcgcgatgcgaagagcgttacttggcgaaatagaaggaaca
tgtatcacacgtgcaaaatttgataaaataccgcacgaatactctaacatagtaggtatt
caagaatcagtacacgaaattttactgaatttgaaagaaatagtattgagaagtaatcta
tatggaacttgcgaagcgtctatttgtgttaggggccccagatgtgtaactgctcaagat
atcatcttgcccccttatgtagaaatagttgacaatacacagcatatagctagcttgacg
gaaccaattgatttgtgtattggattacaactcgagagaaatcgcggatatcagataaaa
gcgcaaaataactttcaagatggaagttatcctatagatgctctattcatgcctattcga
aatgtgaatcatagtattcattcttatggaaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaacggcagtttaaccccgaaagaagcactttatgaagcctcccgg
aatttaattgatttatttattccctttctacatgcagaagaagaaaacttatatttagag
gacaatcaacacaaaatttctttacccctttttacctttcacaatagattggctgaaata
aggaaaaacaaaaaaaaaatagcattgaaatatatttttattgaccaattagaattgcca
cctaggatctacaattgcctcaaaaaatccaatatacatacattattggaccttttgaat
aacagtcaagaagatcttattaaaatggcggattttcatatagaagatataaaacaaata
tttggcactttagaaaaacatttcgtaattgatttaaaaaaaaaaaaatga
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