Amaranthus tricolor (tampala): 130825634
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Entry
130825634 CDS
T09367
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00040
Pentose and glucuronate interconversions
atri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130825634
Enzymes [BR:
atri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130825634
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130825634
NCBI-ProteinID:
XP_057546938
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Position
10:7064385..7066466
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AA seq
397 aa
AA seq
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MHFLFLLLLTVLSFPMFIHTSLVLNPQLVVQEVQEAINVSSRRNWVVPSCMTGNPIDDCW
RCDESWEKNRQRLADCAIGFGKNAIGGKTGKIYVVQDSSDDAINPKIGTLRYGVIQQEPL
WIVFSKDMEIKLKKELIINSFKTLDGRGANVHIANGPCILIHYVNNIIIHNIHIHNCKKG
KNGYVRYTPTHYGWRNRSDGDGISIISSSHIWIDHCSLSRCHDGLIDAIRGSTAITISNN
YMMHHNKVMLLGHNDKYIQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDFTQWKM
YAIGGSAGPTINSQGNRFLAPDNRLTKEVTKRESALETEWKKWNWRSQEDLFLNGAHFVE
SGTGSVSVSPYATAMSLVVRPASLVASITKNAGVLKC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcttgtttcttttgttgttgactgtgctatcttttcccatgtttattcacaca
tcacttgttcttaatcctcaattagtagttcaagaagtgcaagaggctattaatgtatca
tctaggaggaattgggtagtcccctcatgtatgacaggaaatccaatcgacgattgttgg
agatgtgacgagagttgggagaaaaatcgccaacgattagcagattgtgctatcggcttt
ggtaaaaatgctataggtggtaaaacgggtaaaatttatgtggtacaagattctagtgat
gatgctataaaccctaaaataggtacattaaggtatggggtcatacaacaagaaccatta
tggatagttttttctaaagatatggaaattaagcttaaaaaagagttgataatcaattca
ttcaaaaccctagatggaagaggagctaatgtacatattgctaatgggccatgcatactc
atacattatgtaaataacattatcatacataacatccacatacataattgtaagaaagga
aaaaatggttatgtgaggtacacccctacacattatggttggagaaacagatcggatggg
gatggaatctctatcatctcgtctagccatatatggattgatcattgctcgctatcgaga
tgccatgatggcttgatcgatgccatacgtggctcgactgccataaccatatcaaacaac
tatatgatgcatcataacaaggtcatgcttttggggcataatgataaatatatacaagac
aagaacatgcaagttaccattgcatttaatcattttggagagggacttgttcaaagaatg
ccaaggtgtagacatgggtattttcatgtggtaaataatgacttcacccaatggaaaatg
tatgccattggaggaagtgcgggaccaactataaacagccaaggcaacagatttttggct
ccggataatcgcttgactaaagaggtaactaaaagggagagtgcacttgaaacagaatgg
aagaaatggaattggagatcacaagaagatctttttctgaatggggcacattttgtagag
tctgggaccggaagtgtctccgtctcaccttacgcaaccgcgatgagcttagtcgtgcga
ccggcttctcttgtagcttctatcacaaagaatgctggtgtcctcaaatgctag
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