Amaranthus tricolor (tampala): 130826125
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Entry
130826125 CDS
T09367
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic-like
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri00906
Carotenoid biosynthesis
atri01100
Metabolic pathways
atri01110
Biosynthesis of secondary metabolites
Module
atri_M01040
Lutein biosynthesis, plants, lycopene => lutein
atri_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130826125
Enzymes [BR:
atri01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
130826125
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
NAD_binding_8
Thi4
HI0933_like
Pyr_redox
Trp_halogenase
NAD_binding_9
GIDA
FAD_binding_2
Pyr_redox_3
FAD_binding_3
3HCDH_N
XdhC_C
Motif
Other DBs
NCBI-GeneID:
130826125
NCBI-ProteinID:
XP_057547651
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Position
10:1440234..1442287
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AA seq
501 aa
AA seq
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MGTLLKIHSKFEICNPILLGFPEKWSNLSVLKGQKHYTIKSYKKWCKIGIVKASSSTLLE
LVPETKKETLEFELPSYDTLKGKLVDLAVVGGGPAGLAVAQQVSKAGLSVCLIDPSPRLI
WPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFINEGLKKNLDRPYGRVNRKLLKSKMMQKC
ISNGVKFHQAKVMKVTHEETKSLLICNDGVAVQASIVLDATGFARSLVQYNKPYNPGYQV
AYGILAEVEEHPFDVDKMLFMDWRDSHLDGNLDLKSRNSRIPTFLYAMPFSSNRIFLEET
SLVARPGLAMEDIQQRMEARLRHLGIKVTHIEEDERCVIPMGGTLPVIPQRVVGIGGTAG
MVHPSTGYMVARTLAAAPIIANSIVRYLDSKNSRVGIELSAGVWKELWPIERRRQREFFC
FGMDILLKLDLPGTRRFFDAFFDLERVYWHGFLSSRLFLPELIIFGLSLFGHASNYSRLE
ILSKGTLPLINMINNLVKDRD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggtactttgcttaaaattcatagcaaatttgagatttgtaaccctatactactaggg
tttcctgagaaatggtctaatttgagtgttttaaagggtcaaaagcactatacaataaaa
tcctataaaaaatggtgcaaaattggaatagttaaagctagtagtagcactcttttggag
cttgttcctgagactaagaaagaaaccctagaatttgaattgccttcatatgatacatta
aagggcaaattggtagatcttgctgttgtaggaggtgggcctgctggacttgctgttgca
cagcaagtttcgaaggcaggtctttcggtttgtttaattgatccttcccctagattgatt
tggcctaataactatggtgtttgggtagatgaattcgaagccatggatttgcttgattgc
cttgatactacttggtcaggtgctgtcgttttcattaacgagggtttgaaaaagaatctc
gataggccttatgggcgagttaatcgaaaactattgaaatcgaaaatgatgcaaaaatgt
atatcaaatggggtgaaatttcatcaagcaaaagttatgaaagtcacccatgaagaaaca
aaatctttacttatatgcaatgatggcgttgcggttcaagcttctatcgtgttggatgca
acgggttttgctcgaagtttggtgcaatacaataagccatataacccgggttaccaagtt
gcttatgggattttggctgaagttgaagaacacccttttgatgtggataaaatgttgttt
atggattggagggattctcatttggatggtaacttggacttaaaatcgagaaatagtagg
atcccgaccttcctatacgccatgcctttctcctcgaatagaatattcttagaggaaact
tctcttgttgctcgaccaggattggctatggaagatatacaacaaagaatggaagctcgg
ttgaggcatcttggtattaaagtaacgcacattgaggaggatgaacggtgtgtgatccct
atgggaggaacccttcctgtgatcccccaacgcgttgtgggaatcggtgggactgctggt
atggtgcatccttcgactggatatatggttgcgaggacattggcagcagctccgattata
gccaattcgattgttcgatatctagactcgaaaaatagtcgtgttggaattgaattgtct
gccggagtttggaaagagttatggccgatagagaggaggcgacaaagggagttcttctgt
tttggtatggatattctgcttaaacttgatttaccaggaacacgaaggttttttgacgcg
ttttttgacctagaacgggtgtattggcatggattcttgtcgtctcgactatttctaccc
gagcttattattttcgggttatctctttttggtcatgcctctaactattctaggctagaa
attttgtcaaaaggtactttaccattgataaatatgatcaacaacttagttaaagatagg
gattga
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