Aegilops tauschii (wheat D): 109737062
Help
Entry
109737062 CDS
T04345
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109737062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109737062
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109737062
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109737062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
109737062
NCBI-ProteinID:
XP_020151874
LinkDB
All DBs
Position
4:complement(518551260..518570076)
Genome browser
AA seq
2405 aa
AA seq
DB search
MVPLSHPGVGADVRLVLQGATDADRESVRRELCQLVDYGHDGCLLLLQVCLDEVLLNDRE
AKNLQLKHDLLSATFRYCLDKTYFSTCFCEALMRIKTGTDGLLETLSSALELSAAEKVGI
GLALSDSDNSGMKLKGQQFAIAQIEELCLNPNQSVPNDQIHEIVVFLHQTDGLAKHMDTF
SNIASLLEVGQSPFFAPIPKEQHDVQSINHSRHLEMYLDSTNDDFESLLSEIGKEISMAD
IVTELGYGCTVDSTQCKEILSTFQPLDDVAISKLLGAVIGTQNSLAEAHNTYATFVSAIR
NTHLSESPQLTTWNTDVLVDSINELAPSTNWVHVMESLDHEGFSIPDEAAFCLLMNIYGR
ACKDPFPLHAVCGSMWTNTEGQISFLKHAISAPATIFTFAHSSRLLALPDFASLGPGNHA
WFCLDLLEVLCQLAEVGHTVSVRSMLDYPLGHCPELLLVGLGHINTAYNLLQFEVLSCAF
PAILKDATKRNVVNYLWHINPCLTLRGFVDAHSDPSCLLRIVDVCHDLKILSAVLESTPF
AFSIRLAAAACRKDHSHLEKWLTEKLTVYKDGFVEECVNFLKEAMNAASYVVEGTTEQPQ
ASVVDTYWEACPPFIKVLQSHLGQLLSNQLSDELRELCALYESRNQGPVARDIPTSEGGS
DDVEVEANAYFHQMFSGQINIDVMIQMLTRFKESPDKREQSIFNCMISNLFEEYKFFTKY
PDKQLKLAAVLFGSLIKHELVAHLGLGIALRAVLDALRKSVDSKMFMFGTTALEQFMDRV
IEWPQYCNHILQISHLRATHAEMVSAIERALARISSSQNEPNAGNLLSTEQLVSGSSSIE
AMEASEPSWQLMGTSPTQLGRTPYPLQQRQASVLGDRSKISVGTSQNKSILPSQPSVPSA
SADSAFNLKTTVPPSLAHSTSMSNSAHSTSFLRPRNTSTVLPRQHSYTTGFGNALNIETL
VAAAEQRDNTIETPPSEVQDKILFMINNISTSNMEAKAKEFNEVLQEQYYPWFAQYMVMK
RASIEPNFHDLYLKFFDKLNSRSLSKEMLKATYENCKVLLRSDLIKSSSEERSLLKNLGS
WLGKFTIGRNQTLRAKEIDPKSLIVEAYERGLMIAVIPFTSKILEPCHSSIAYRPPNPWT
MGILSLLSEIYNLPNLKMNLKFDIEVLFKNLSVDMKDVKPTSLLKDRGREVEGNPDFSNK
DVASSQTPVAAEVSSGVNPPIKHVDLQPEVNSTSRTLSLPTIYTAPVRLPPNSMVEDDKI
ALMMPEQVPSHTLTQVSSSQTPLVSLSPSPLSLTQLLSLIPHDEIRFKISSKLLPFGSQL
QFSKIMGVALDKAIKEIILPVIERSVSIASKTTKEIILKDYATESDYSAANRSARLMVGT
LAGSLAHVTCKEPLRVALLSHLRSLTQNLASNSETLEQIVQILINDNLDLGCASIESVAA
RKAVDSIEGEITQSFSQQRKKREAAGPTYYDSFAYAQGPFAPVPEVFHTKAESPAQQRVY
EEFVHVWQSSHGQSVGAASSGTAAVSSNFGVPRAYSPSLAQASSGFLSAQTAPLTLTQPT
ELVYEELIPGASQLSSDSPAQVGTSDSSGWLGGTIGDASTSPPLMSNDLPAGGIMDLNVM
TPPPATFPDNLGSGLPDTLSTGDAMERYEQVSQKLEVLIAKDGKDVEIQSVVAEVPDILL
KCVNRDEAALAVAQKVFKSLYDNTSNSGSVMWFLATLVAIRDVCKLVVKELTNWVIYSDD
EKKFNSEIIFALIRSDLLDVREYNVQLAKLIDGGRNKIATEFAMSLVQTLITQDSASISE
LQDVVDVLSKISRRSGSPELMQQVNEIARNNANNAPGFAFGKDKKVLPNRANKEENSVND
ATVADSVAFQDQVAHLFSEWCQICDHPNASDAAYSRYVMQLQHIGLLKGDEFTERFFRIL
TELAVAHSVVSEQINAPGGLSQQSSHISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPK
ILSVTIRVIQKDAEEKKASFNPRPYFRLFINWLNDLSTSELHHDGANFQVLAAFANAFHV
LQPSRIPSMSFAWLELVSHRTFMARLLTGNSQKGWPFFQRLLIDLFKFMEPYLRTADLLE
PVHLMYKGTMRVLLVLLHDFPEFLCDYHFSFCDVIPSSCIQMRNVILSAFPRNMRLPDPS
TPNLKIDLLAEISLPPRIMSDVDGALKLKHMKVDVDEYLKRPEGSSFLNDLKQKLLLPQN
EANVAGTRYNVPLMNSLVLYIGIQAVQQLQANKANASASAQQINHNTMDIFQIETATEFF
RYLVTNLDTEGRYLFLNAIANQLRYPNSHTHYFSFIILYLFAEAAQEHIQEQVTRVLLER
LIVNRPHPWGLLITFIELIKNPRYNFWNRAFTHCAPEIKQLFESVAKSCGGGAGKAVDDG
SDGGH
NT seq
7218 nt
NT seq
+upstream
nt +downstream
nt
atggtcccgctgagccaccccggcgtcggcgccgatgtgcggctggtgctgcagggcgcc
accgacgccgaccgcgagtccgtccgccgcgagctctgccagttagttgactatggtcac
gatggatgtcttttgctgctccaagtctgtttggatgaagtgctgctgaatgacagggag
gccaaaaacttgcagttgaagcatgatcttctatccgccactttcagatattgtctggat
aaaacgtattttagcacttgtttctgtgaggcactgatgcggataaaaactggtactgat
ggcctccttgagactctgtcgagtgcactggaactctcagcagccgagaaagtcggtatt
ggtcttgcgctgtcagattctgataattcaggcatgaagctgaaagggcaacaatttgca
attgctcaaattgaggagttgtgtttgaatcctaatcaatcggtaccaaatgatcaaatt
catgaaatcgtcgtcttccttcaccagaccgatggcctggcaaagcatatggatactttt
agtaacattgcttctcttctagaagttggacagagtcctttttttgctcccatccccaaa
gagcagcatgatgttcagtcaataaatcattcaagacatttggagatgtacttggatagc
acaaatgatgactttgagtcacttctttctgaaattgggaaagaaataagtatggcggac
atagtaactgagttgggttatggatgcactgttgacagcacacagtgtaaggaaatactt
tccacttttcagcctcttgatgatgtggcaatatctaagttgctcggggcagttattggc
actcaaaatagtcttgcagaggcccataacacttatgcaacctttgtatctgctattcga
aatacccacttgagtgagtcacctcaattgactacatggaacacagatgttcttgtggat
tcaatcaacgaattggccccaagtactaattgggtgcacgttatggaaagccttgatcat
gagggtttcagtattcctgatgaagcagctttctgtttactgatgaatatatatggtcgc
gcttgcaaggatccctttccgcttcatgctgtttgtgggtcaatgtggacaaatacagaa
ggccagatatcatttttaaagcatgcaatttctgcccctgctactatttttacatttgca
catagttcgaggctgctggcacttccggactttgcaagtcttggtccaggtaatcatgct
tggttttgccttgaccttctagaggttttatgccagcttgctgaagttggacacactgtg
tcggtgcggtccatgcttgattatcctttgggacattgccctgaactcctacttgttggt
cttggacacatcaacactgcctataatctcctccaatttgaagtgctgtcctgtgcattt
cctgctattctgaaggacgccacaaagagaaatgtggtgaactatctctggcatattaac
ccatgcctcacccttcgaggatttgttgatgctcattctgatccaagctgtctcctgaga
attgtggatgtgtgtcacgaccttaagatcctatctgctgtcctcgagtccactccattc
gcatttagcattagattggcggctgctgcttgtaggaaagatcatagccatcttgagaaa
tggctcactgagaagttaactgtatacaaggacggttttgtcgaggaatgcgttaatttc
ctgaaagaagctatgaacgccgcatcttatgtggtagagggtaccacggaacaacctcaa
gctagtgttgtggacacgtattgggaagcttgtcctccctttataaaggttctccagtct
cacttgggacagctcttatccaaccaactctcggatgaactaagggagttgtgtgctctg
tatgaatcgagaaatcagggtcctgtagcaagggacatacctacctcggagggaggttca
gatgatgttgaagtagaagcaaatgcgtattttcaccagatgttttctggacagataaac
attgatgtgatgatacaaatgctcactcgcttcaaagaatctccagataagagggagcaa
tcaatttttaattgtatgatctcaaatctgtttgaggaatacaagttctttacgaagtat
ccggataagcagcttaaactagctgctgtgctatttggatcccttatcaaacatgaactt
gtggcccacctcggacttgggattgctctacgcgctgttcttgatgccttacgcaagtct
gttgattcaaagatgtttatgtttggtacgacagcattggaacagttcatggatcgtgta
atagagtggccacagtactgcaatcacatattgcagatttcacatcttcgagctactcat
gctgaaatggtctctgcaattgagcgagcacttgccaggatttcatcaagtcaaaatgag
cccaacgctggcaacttgctttccacggagcagcttgtttctggatcgtcatctattgaa
gccatggaggcatctgaaccatcatggcagttaatgggtacatctccaactcagctagga
aggacaccttacccgttgcagcaaaggcaagcaagtgtccttggagacaggtccaagatc
tccgtcggcacctctcagaataagagcattttacctagtcagccttcagttccttcggca
tctgctgattcagcctttaatttaaagactactgttccaccttcattagctcactctacg
agcatgtcaaatagtgctcattccactagttttctgcgcccccggaatacctcgacagtt
ttgccccggcaacattcctacactacgggatttggaaatgctttaaatattgagacactt
gtagcagcagcggagcaaagagataatacaattgagactcccccgtctgaagttcaggac
aagatcttgtttatgattaacaatatatccacctctaatatggaagccaaggcgaaagaa
tttaatgaagtgcttcaggaacaatattatccttggtttgcacagtacatggtcatgaaa
agggcaagcatcgagccaaattttcatgatttatacctgaaattctttgacaaacttaac
tcaagatccttgagtaaggagatgctgaaagctacatatgagaactgcaaggttttgtta
agatcagatcttatcaaatctagttccgaggaacgttccttgctaaaaaatttgggcagt
tggttgggaaaatttaccataggaagaaaccagacattaagagccaaggaaattgacccg
aaatctcttattgtggaggcttatgagagaggacttatgattgctgtaattccattcact
tcaaagattctcgaaccttgccattcaagtatagcatatcgtcctccaaatccgtggaca
atgggaattcttagtctactttctgagatctataatctaccaaacctgaagatgaatcta
aaatttgacattgaggtcctgtttaagaacctcagtgtggacatgaaagatgtgaaaccg
acttcccttcttaaagatcgaggacgtgaagttgagggaaacccagatttttcaaacaaa
gatgttgcttcgtcccaaaccccagtggctgcagaagtctcttcaggtgtcaacccccca
ataaaacatgtagacctgcagcctgaggtcaatagcacttcccgtaccctgagccttcca
actatatatactgctcctgttcgtctccctcctaacagtatggtggaggatgataaaatt
gctctaatgatgcctgagcaagtcccctctcacaccttgacccaggtctcatcttcacaa
acaccattagtatcactatcgccatcgccactctctctaactcagcttttgtcgctgatt
ccacatgatgagatacgcttcaaaataagctcaaaacttttgccttttggctcacagttg
cagttcagcaaaatcatgggtgtggctttggataaggctatcaaagagataatactccct
gtcattgaaagaagtgtctcaatagcaagcaaaactacaaaagaaattattctaaaggat
tatgcaacggaatctgattacagtgctgcaaatcgctcggctcgtttgatggtcggaacg
ttagctggaagtctagcccatgttacttgcaaggaaccgcttcgtgttgcgctactgtct
catctccgaagccttactcaaaaccttgctagcaacagcgaaactcttgagcaaatagta
cagattctgatcaacgacaatttggatcttggctgtgcaagtattgagtctgtagcggcg
cgcaaggctgttgattcgattgagggtgaaataactcaatccttttcacaacaaaggaag
aaaagagaggcagctggtcctacatattatgactcttttgcttatgctcaaggtccattt
gcccctgtacctgaagtattccataccaaggcagagtctcctgcccaacaacgagtatat
gaggagtttgttcatgtatggcagagtagtcatggccaaagtgttggtgctgcaagttct
ggtacagctgctgtatcgagcaattttggtgtacctcgagcttacagcccaagtttagca
caagcttccagtggtttcttgtctgctcaaacagctccacttacattaactcagcctaca
gagctggtgtatgaggaattgattcctggcgcttcacaactttctagtgattctcctgct
caagttgggaccagcgactcttctggctggcttggtggaaccattggcgatgcatccaca
tctccacccttgatgtctaatgacctacctgcgggaggaataatggatttaaatgttatg
acgccacctccagctacatttcctgacaatctaggatctggtttacctgatactttgagc
actggtgatgctatggagagatacgaacaggtttcacaaaagctggaagtcttgattgcc
aaggatggtaaagatgtggaaatccagtctgttgtagcggaagttcctgatatcttactc
aaatgtgttaatcgggatgaggctgcattagctgttgcacaaaaggttttcaaaagtttg
tatgacaacacatcaaatagcggttctgtcatgtggtttctagcaaccttagttgcgata
agagatgtatgcaagcttgttgtcaaggagctaacaaattgggtaatctattcggacgat
gagaagaagtttaatagtgaaatcatttttgcccttattcgttctgatttgctggatgtc
agggagtacaatgttcagttagcaaagctaattgacggtggaagaaacaagattgcaaca
gaatttgccatgtcacttgtccagacattgattactcaggactccgctagtatctcagaa
ctccaggatgttgttgatgtgctatcaaagatttcaaggaggtcaggttcacctgagttg
atgcaacaggtgaatgagattgcaaggaataatgccaacaatgctcctggttttgctttt
gggaaggataaaaaggttctacctaaccgggcaaacaaagaggaaaacagtgttaacgac
gccactgtagctgattctgttgcttttcaagaccaggttgcacacctattttctgagtgg
tgccaaatatgtgatcatccaaatgctagtgatgcggcctatagtcgttatgttatgcag
ttgcaacatattggcctgctgaagggagacgaattcactgaacgtttcttccgaattctc
acggaacttgctgttgcacactctgtagtctctgagcaaattaatgctcctggtggattg
tctcagcagtcatcacatatatcatatttccccattgattcatattcgaagcttgtgtct
gtggtgataaagaattgttcagtggaaataggaccaaataaaggcagccttcttcccaag
atattgtcagtgacaattagggtcattcagaaagatgctgaagagaagaaagcttcattt
aacccccgaccatactttcggctgtttatcaattggctgaatgaccttagtacttctgaa
ctccatcatgatggagctaatttccaggttttggctgcatttgcaaatgcattccatgta
ctgcaaccctcgagaattcctagcatgagctttgcttggcttgagttggtgagtcataga
acctttatggcaagactgctgacgggcaattcacaaaaagggtggccttttttccaacga
ctacttattgatctgttcaaattcatggaaccgtatttgagaactgccgaccttttagaa
ccagtgcaccttatgtacaaaggaactatgagagtgctgcttgtactactccatgacttt
cctgaatttctgtgtgattatcacttcagtttttgtgacgtgatcccttccagttgcatt
caaatgcgcaatgtcattcttagtgcttttccgcgcaacatgagacttccagacccatct
actcctaacttgaagattgatctgctagctgaaatttcattacctccacgaatcatgtca
gatgtcgatggtgccctcaagttaaagcatatgaaggttgatgtcgatgagtatcttaag
agaccagaaggctcatcctttttgaatgatctgaagcaaaaattgctgctgcctcagaat
gaagctaatgttgctgggacacgctacaatgtgcctctgatgaattcgcttgttctctac
attggcatccaagcggtgcaacaattgcaagcgaacaaggcaaatgcatctgcgtcagca
cagcagattaaccataatacaatggatatttttcagatcgaaacagcgactgaatttttc
agatatcttgtaacgaacttggatacagaggggcgctacctgtttttgaatgcgattgct
aaccaactgcgctacccgaatagccacacacactacttctccttcatcattctgtatcta
tttgctgaagctgcccaggaacatatccaggagcaggtaaccagggttctcttagaacgg
ctgatagtgaaccgtcctcacccctggggattactcatcaccttcatcgagctgataaag
aacccacgctacaacttttggaaccgagccttcacacactgcgcacctgagattaagcag
ctgtttgagtcggtcgcaaagtcatgcggtggaggcgctggaaaggcagtggacgatggc
tctgatggcggccactaa
DBGET
integrated database retrieval system
