KEGG   Aegilops tauschii (wheat D): 109743206
Entry
109743206         CDS       T04345                                 
Name
(RefSeq) splicing factor SF3a60 homolog isoform X1
  KO
K12827  splicing factor 3A subunit 3
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109743206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ats03041]
    109743206
Spliceosome [BR:ats03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109743206
 Complex B
    109743206
 Complex C
   U2 SnRNP specific factors
    109743206
SSDB
Motif
Pfam: SDE2_2C SF3a60_Prp9_C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 109743206
NCBI-ProteinID: XP_020157874
LinkDB
Position
7:complement(419315582..419324616)
AA seq 481 aa
MASSVLEATRAAHEDLERLDRLVVRELQRDPANARDRLFQSHRVHHMLDLVISTSDKLVE
IYEDKDGARKDEISTHLTAPVQSDIFPKYYERLKEIRDYHRRNHSARFISETDDYEELLK
EEPAIEFTGEEAFGRYLDLHELYNEFINSKFGSLMEYSAYVGTFAQTEKISHSLKATRQY
KEYLEHILEYLTSFMYRTEPLQDIDKIFTKLQSEFEEQWANGEVPGWENKGTGKKSESQE
SAVDLDYYNTVEELVELGPEKLKEALTARALKGGGTVQQRAKRLFLLKHTPLEQLDRKHF
AKGDDLKKEIALVEVKMKRLCEILDEVIVRTKENAEKKLTLTYEEMEAEREEEEVQADSE
SDEEDQQIYNPLKLPMGWDGKPIPYWLYKLHVLVRNSSARYVVTYVVTTVTGGEGIMSAI
SRSGAISMGCDALEAKALWERIQAKQGLNKWRPDLEEEYEDKDGNIYNKKMYTDLQRQGL
I
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcatcgtcagtgctggaggccacgcgggcggcgcacgaggacctcgagcggttagac
cgcctggtggtgcgcgagctgcagcgagatcccgccaatgcccgcgaccgcctcttccag
tcccaccgcgtccaccacatgctcgacctcgtcatctccacttccgacaagctcgttgaa
atctacgaagacaaggacggtgctaggaaggatgagatctccacccatcttaccgcgccg
gtgcaaagcgacatcttccccaagtactatgaaaggctcaaagagatccgtgattaccat
agacggaatcactctgcccgtttcatcagtgaaactgacgattatgaggagctactaaag
gaggaaccggctattgaattcactggcgaggaggcatttggccggtacttggacttacat
gagctctacaatgagttcataaattccaagtttggatcgctaatggaatactcagcatat
gttggcacttttgctcagactgaaaaaatctcgcatagtctaaaagctaccaggcaatac
aaagaatatttggagcatattttggaatacctgacgtcatttatgtatcgtacagagcca
ttgcaagatattgataagatttttacaaagttgcaaagtgagttcgaagaacagtgggcc
aatggcgaagtacctggatgggagaataagggcacagggaaaaaatctgaatcgcaagag
tctgcagtagacctcgattactacaatactgttgaagagcttgtagagcttggtccggaa
aagttgaaagaggctttaactgctcgtgcattgaagggtggcggcactgttcaacagcgt
gctaagcgccttttcttgctgaagcatacacccttggaacaattggatcgtaagcatttt
gccaaaggtgatgatttgaagaaggaaattgctttggttgaagtgaagatgaagcgctta
tgtgagattctcgatgaggtcattgtaagaacaaaggaaaacgcagagaagaagctgact
ttgacctatgaagaaatggaagcagaacgggaagaagaagaagtacaagctgatagtgaa
agtgatgaagaagaccaacaaatctacaaccctctgaagttgccaatgggttgggacggg
aaacctatcccctattggctctataagcttcacgtcttggtcaggaattcaagtgcgaga
tatgtggtaacatatgtggtaaccacagttactgggggcgaagggattatgagcgccatt
tcaaggagtggcgccatcagcatgggatgcgatgccttggaggcgaaagcactgtgggag
aggatacaagcaaagcaagggctgaacaagtggcggccagacttggaagaggagtacgag
gacaaggatggcaacatctacaacaaaaagatgtacactgacctgcagcgccaaggcctg
atatag

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